BLASTX nr result
ID: Coptis25_contig00006576
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006576
(1380 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282375.1| PREDICTED: probable RNA 3'-terminal phosphat... 397 e-139
ref|XP_002534151.1| RNA 3' terminal phosphate cyclase, putative ... 409 e-137
ref|XP_002298266.1| predicted protein [Populus trichocarpa] gi|2... 395 e-131
ref|NP_001242399.1| uncharacterized protein LOC100778883 [Glycin... 375 e-126
ref|XP_003517055.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 372 e-125
>ref|XP_002282375.1| PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein
[Vitis vinifera] gi|296087784|emb|CBI35040.3| unnamed
protein product [Vitis vinifera]
Length = 376
Score = 397 bits (1020), Expect(2) = e-139
Identities = 204/267 (76%), Positives = 220/267 (82%)
Frame = +2
Query: 416 LSIRLKGITNDSKDPSVDTFKRTTLPLLKRFGVPSEGLDLKIESRGSPPQGGGEVHLGIP 595
LSI LKGITNDSKDPSVDTF+ TTL +LK FGVPSEGL L I +R PP GGGEV L IP
Sbjct: 113 LSITLKGITNDSKDPSVDTFQSTTLSILKHFGVPSEGLKLTIRNRAPPPHGGGEVELKIP 172
Query: 596 IVLNSLSAVTWIDEGMVKRIRGTAFSTKVSYQFEKTMIHAARGIFNRLLPDVHIFQDHRS 775
IV NSL+AVTWIDEGMVKRIRG F+++VS QFE TM +AARGIFNRLLPDVHI H
Sbjct: 173 IVQNSLTAVTWIDEGMVKRIRGLTFTSRVSSQFEHTMRYAARGIFNRLLPDVHISTYH-- 230
Query: 776 GQEAGKSPGYGISLVAETTTGCFISTDTAVCYARGEXXXXXXXXERKELMPPADVGEQAA 955
+ GKSPGYGIS+VAETT+GCFIS DTAV Y RGE E ELMPP +VGEQ A
Sbjct: 231 -SKTGKSPGYGISVVAETTSGCFISADTAVSYGRGEESGEDKDEENNELMPPEEVGEQIA 289
Query: 956 SMLLGEIEQGGVVDSMHQGILFILCALCPQDVSKVRVGKLSPYAIETLRHIRDFLDVKFV 1135
S+LLGEIEQGGVVDS HQG+LF+LCALCPQDVSK+RVGKLSP IETLRHIRDFL VKFV
Sbjct: 290 SVLLGEIEQGGVVDSTHQGLLFLLCALCPQDVSKIRVGKLSPNGIETLRHIRDFLGVKFV 349
Query: 1136 ITPDSSTETVILKCVGCGLKNLSRKIS 1216
I PD STETVILKCVGCGLKNLSRKIS
Sbjct: 350 IKPDPSTETVILKCVGCGLKNLSRKIS 376
Score = 126 bits (317), Expect(2) = e-139
Identities = 55/66 (83%), Positives = 63/66 (95%)
Frame = +3
Query: 105 PVLIDDIRHEDTWPGLRPHEISLLRLLEKITDDCLVEINETGTKLKYKPGVIVGGRNLVH 284
PVLIDDIRH+DTWPGLRP+E+SLLRL EKI DDC+VEINETGTKLKYKPG+I+GG+NLVH
Sbjct: 28 PVLIDDIRHDDTWPGLRPYEVSLLRLFEKICDDCVVEINETGTKLKYKPGIIMGGKNLVH 87
Query: 285 DCGLSR 302
DCG+ R
Sbjct: 88 DCGVGR 93
>ref|XP_002534151.1| RNA 3' terminal phosphate cyclase, putative [Ricinus communis]
gi|223525786|gb|EEF28234.1| RNA 3' terminal phosphate
cyclase, putative [Ricinus communis]
Length = 377
Score = 409 bits (1051), Expect(2) = e-137
Identities = 205/267 (76%), Positives = 226/267 (84%)
Frame = +2
Query: 416 LSIRLKGITNDSKDPSVDTFKRTTLPLLKRFGVPSEGLDLKIESRGSPPQGGGEVHLGIP 595
L IRL+GITNDSKDP VDTF+ TTLP+LKRFGVPSEGL LKIESRGSPP GGGEV L +P
Sbjct: 113 LEIRLRGITNDSKDPCVDTFRSTTLPMLKRFGVPSEGLGLKIESRGSPPHGGGEVVLSVP 172
Query: 596 IVLNSLSAVTWIDEGMVKRIRGTAFSTKVSYQFEKTMIHAARGIFNRLLPDVHIFQDHRS 775
IV SL AVTW DEGM+KRIRG +ST+VS QFE TMIHAARGIFN LLPDVHIF DH++
Sbjct: 173 IV-QSLQAVTWTDEGMIKRIRGVTYSTRVSSQFENTMIHAARGIFNHLLPDVHIFTDHKA 231
Query: 776 GQEAGKSPGYGISLVAETTTGCFISTDTAVCYARGEXXXXXXXXERKELMPPADVGEQAA 955
G +AG SPGYGISLVAETT+GCF+S DTA+ YARG+ E+K+LMPP DVGEQ A
Sbjct: 232 GPQAGNSPGYGISLVAETTSGCFLSADTAISYARGDDIGEMED-EKKDLMPPEDVGEQIA 290
Query: 956 SMLLGEIEQGGVVDSMHQGILFILCALCPQDVSKVRVGKLSPYAIETLRHIRDFLDVKFV 1135
S+LL E+EQGGVVDS HQ +LF+LCALCPQDVSK+RVGKLSPY IETLR IRDFL VKFV
Sbjct: 291 SVLLEEVEQGGVVDSTHQALLFLLCALCPQDVSKIRVGKLSPYGIETLRSIRDFLGVKFV 350
Query: 1136 ITPDSSTETVILKCVGCGLKNLSRKIS 1216
I PD ST TVILKCVGCGLKNLSRK S
Sbjct: 351 IKPDPSTGTVILKCVGCGLKNLSRKSS 377
Score = 107 bits (266), Expect(2) = e-137
Identities = 46/66 (69%), Positives = 59/66 (89%)
Frame = +3
Query: 105 PVLIDDIRHEDTWPGLRPHEISLLRLLEKITDDCLVEINETGTKLKYKPGVIVGGRNLVH 284
P+LI+DIR +DT PGLR HE+S LRLLE+I+DDC +EINETGTK KYKPG+++GG++ VH
Sbjct: 28 PLLIEDIRADDTLPGLRSHEVSFLRLLERISDDCHIEINETGTKFKYKPGIVMGGKHHVH 87
Query: 285 DCGLSR 302
DCG+SR
Sbjct: 88 DCGVSR 93
>ref|XP_002298266.1| predicted protein [Populus trichocarpa] gi|222845524|gb|EEE83071.1|
predicted protein [Populus trichocarpa]
Length = 376
Score = 395 bits (1016), Expect(2) = e-131
Identities = 204/267 (76%), Positives = 224/267 (83%)
Frame = +2
Query: 416 LSIRLKGITNDSKDPSVDTFKRTTLPLLKRFGVPSEGLDLKIESRGSPPQGGGEVHLGIP 595
LSIRLKGITNDS DP VDTF+ TTLPLLK+FGVPSEGL+LKIESRG+PP GGGEV L IP
Sbjct: 113 LSIRLKGITNDSNDPCVDTFRSTTLPLLKQFGVPSEGLELKIESRGAPPHGGGEVLLSIP 172
Query: 596 IVLNSLSAVTWIDEGMVKRIRGTAFSTKVSYQFEKTMIHAARGIFNRLLPDVHIFQDHRS 775
+ SL+AVTWIDEGMV+RIRG FST+VS QFE TMIHAARGIFN LLPDVHIF DH++
Sbjct: 173 NI-QSLTAVTWIDEGMVRRIRGVTFSTRVSSQFENTMIHAARGIFNHLLPDVHIFTDHKA 231
Query: 776 GQEAGKSPGYGISLVAETTTGCFISTDTAVCYARGEXXXXXXXXERKELMPPADVGEQAA 955
G +AG SPGYGISLVAETT+GCFIS +TAV YAR E E+ ELMPP DVGEQ A
Sbjct: 232 GPQAGNSPGYGISLVAETTSGCFISANTAVSYARTEDGGMED--EKGELMPPEDVGEQIA 289
Query: 956 SMLLGEIEQGGVVDSMHQGILFILCALCPQDVSKVRVGKLSPYAIETLRHIRDFLDVKFV 1135
S+LL EIEQGGVVD+ HQG+LF+LCALCPQDVSK+RVGKL P+ IE LR IRDFL VKFV
Sbjct: 290 SVLLQEIEQGGVVDTTHQGLLFLLCALCPQDVSKIRVGKLIPHGIEVLRLIRDFLGVKFV 349
Query: 1136 ITPDSSTETVILKCVGCGLKNLSRKIS 1216
I PD ST TVILKCVG GLKNLSRK S
Sbjct: 350 IKPDPSTGTVILKCVGSGLKNLSRKSS 376
Score = 100 bits (250), Expect(2) = e-131
Identities = 45/66 (68%), Positives = 57/66 (86%)
Frame = +3
Query: 105 PVLIDDIRHEDTWPGLRPHEISLLRLLEKITDDCLVEINETGTKLKYKPGVIVGGRNLVH 284
P++I IR D PGLR HE+SLLRLLEKI+DDC+V+INETGT ++YKPG+++GGR+LVH
Sbjct: 28 PIIIKGIRANDMLPGLRLHEVSLLRLLEKISDDCVVKINETGTMVQYKPGILMGGRHLVH 87
Query: 285 DCGLSR 302
DCG SR
Sbjct: 88 DCGESR 93
>ref|NP_001242399.1| uncharacterized protein LOC100778883 [Glycine max]
gi|255636967|gb|ACU18816.1| unknown [Glycine max]
Length = 379
Score = 375 bits (964), Expect(2) = e-126
Identities = 185/267 (69%), Positives = 220/267 (82%)
Frame = +2
Query: 416 LSIRLKGITNDSKDPSVDTFKRTTLPLLKRFGVPSEGLDLKIESRGSPPQGGGEVHLGIP 595
L+IRLKGITNDSKDPSVDTFK TTLP+LKRFGVPSEGL++K+ESRG PP GGGEV L +P
Sbjct: 114 LTIRLKGITNDSKDPSVDTFKSTTLPILKRFGVPSEGLEIKVESRGLPPNGGGEVLLSVP 173
Query: 596 IVLNSLSAVTWIDEGMVKRIRGTAFSTKVSYQFEKTMIHAARGIFNRLLPDVHIFQDHRS 775
+V SL+AV+WIDEG V++IRGT+FST+VS QFE MI AARGI N L+ DVHIF DHRS
Sbjct: 174 VV-QSLTAVSWIDEGFVRKIRGTSFSTRVSVQFEYGMIKAARGIINPLVSDVHIFSDHRS 232
Query: 776 GQEAGKSPGYGISLVAETTTGCFISTDTAVCYARGEXXXXXXXXERKELMPPADVGEQAA 955
G EAG SPGYGISLVAETT+GCFIS DTAV R + +++LM P D+G A
Sbjct: 233 GPEAGNSPGYGISLVAETTSGCFISVDTAVSQVRDDDTSGLADDAKRDLMSPDDIGVGIA 292
Query: 956 SMLLGEIEQGGVVDSMHQGILFILCALCPQDVSKVRVGKLSPYAIETLRHIRDFLDVKFV 1135
S LLGEI Q GVVDS HQG+LF+LCALCPQDVSKVRVGKLS + +ETLR++RDFLD+KF+
Sbjct: 293 SALLGEIAQSGVVDSTHQGLLFLLCALCPQDVSKVRVGKLSQHGVETLRNLRDFLDLKFI 352
Query: 1136 ITPDSSTETVILKCVGCGLKNLSRKIS 1216
I PD ++++V LKC+G G+KNLSRK+S
Sbjct: 353 IKPDPNSQSVFLKCIGYGMKNLSRKVS 379
Score = 104 bits (260), Expect(2) = e-126
Identities = 49/67 (73%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = +3
Query: 105 PVLIDDIRHEDTWPGLRPHEISLLRLLEKITDDCLVEINETGTKLKYKPGVIVGGR-NLV 281
P+LI+DIR ++TWPGLR HEISLLRL E + DDC VEINETGTKLKYKPG I+GGR +
Sbjct: 28 PILIEDIRADETWPGLRNHEISLLRLFETVCDDCHVEINETGTKLKYKPGTIMGGRQHSP 87
Query: 282 HDCGLSR 302
HDCG+SR
Sbjct: 88 HDCGVSR 94
>ref|XP_003517055.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA 3'-terminal phosphate
cyclase-like protein-like [Glycine max]
Length = 379
Score = 372 bits (956), Expect(2) = e-125
Identities = 182/267 (68%), Positives = 220/267 (82%)
Frame = +2
Query: 416 LSIRLKGITNDSKDPSVDTFKRTTLPLLKRFGVPSEGLDLKIESRGSPPQGGGEVHLGIP 595
L+IRLKGITNDSKDPS+DTFK TTLP+LKRFGVP E L+LK+ESRG PP GGGEV L +P
Sbjct: 114 LTIRLKGITNDSKDPSIDTFKSTTLPILKRFGVPFEDLELKVESRGLPPNGGGEVVLSVP 173
Query: 596 IVLNSLSAVTWIDEGMVKRIRGTAFSTKVSYQFEKTMIHAARGIFNRLLPDVHIFQDHRS 775
+V N L+AV+WIDEG V++IRGT FST+VS QFE +MI +ARGI N L+ DVHIF DHRS
Sbjct: 174 VVQN-LTAVSWIDEGFVRKIRGTTFSTRVSVQFEYSMIKSARGIINPLVSDVHIFSDHRS 232
Query: 776 GQEAGKSPGYGISLVAETTTGCFISTDTAVCYARGEXXXXXXXXERKELMPPADVGEQAA 955
G EAG SPGYGISLVAETT+GCFIS DTAV AR E +++LMPP D+G A
Sbjct: 233 GPEAGNSPGYGISLVAETTSGCFISADTAVSQARDEDTSGLADDAKRDLMPPDDIGVGIA 292
Query: 956 SMLLGEIEQGGVVDSMHQGILFILCALCPQDVSKVRVGKLSPYAIETLRHIRDFLDVKFV 1135
+ L+GEI Q GVVDS HQG+LF+LCALCPQDVSKVRVGKLS + +ETLR++RDFLD+KF+
Sbjct: 293 NALVGEIAQNGVVDSTHQGLLFLLCALCPQDVSKVRVGKLSQHGVETLRNLRDFLDLKFI 352
Query: 1136 ITPDSSTETVILKCVGCGLKNLSRKIS 1216
I PD ++++V LKC+G G+KNLS+K+S
Sbjct: 353 IKPDPNSQSVFLKCIGYGMKNLSQKVS 379
Score = 104 bits (259), Expect(2) = e-125
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = +3
Query: 105 PVLIDDIRHEDTWPGLRPHEISLLRLLEKITDDCLVEINETGTKLKYKPGVIVGGR-NLV 281
P+LI+DIR ++TWPGLR HEISLLRL E + DDC VE NETGTKLKYKPG I+GGR +
Sbjct: 28 PILIEDIRADETWPGLRNHEISLLRLFETVCDDCQVEFNETGTKLKYKPGTIMGGRQHSA 87
Query: 282 HDCGLSR 302
HDCG+SR
Sbjct: 88 HDCGVSR 94