BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006575
         (1760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group...   584   e-164
gb|ABA93730.1| retrotransposon protein, putative, unclassified [...   580   e-163
gb|ABA95230.1| retrotransposon protein, putative, unclassified [...   570   e-160
gb|ABA95797.1| retrotransposon protein, putative, unclassified [...   570   e-160
ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...   565   e-158

>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711651|gb|ABF99446.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1393

 Score =  584 bits (1505), Expect = e-164
 Identities = 295/567 (52%), Positives = 391/567 (68%), Gaps = 4/567 (0%)
 Frame = +3

Query: 3    PVVEPPRFPSRTRHPPDKYGFPT---NHPIAQFVSYQGVSASYQTYLTXXXXXXXXXXXX 173
            P+V+     S    PP + GF      H IA +++Y  VS +Y+T++             
Sbjct: 829  PLVQRRETRSNAGRPPIRLGFEHLSFMHDIANYITYSHVSPAYKTFIASLQTMPIPKDWK 888

Query: 174  EALSDPHWVAAMQAEMTALEQNQTWEMVALPPKTRPVGCKWVFTVKYLADGTVERYKARL 353
             A  DP W  AM+ E+ AL +N+TWE+V LPP+ R VGCKWVFTVK   +G V+RYKARL
Sbjct: 889  CAKQDPKWKDAMKEELNALVKNKTWELVKLPPEKRAVGCKWVFTVKQTPEGKVDRYKARL 948

Query: 354  VAKGFTQVPGRDFGATFAPVAKLKSVRLLISLAASYDWPLHQLDVKNAFLHGDLAETIYM 533
            VAKG++Q  G D+  TFAPVAK+ +VR L+S A ++ WPLHQLDVKNAFLHGDL E +YM
Sbjct: 949  VAKGYSQTYGIDYDETFAPVAKMGTVRALVSCAVNFGWPLHQLDVKNAFLHGDLHEEVYM 1008

Query: 534  DPPPGFRGEGEYARKVCRLRKSLYGLKQSPRAWFSRFSEVVLQYGFTRCHSDHTLFVRRN 713
            + PPGF G  +   KVC+L+KSLYGLKQSPRAWF RF   V   G+++C+ DHT+F +  
Sbjct: 1009 EIPPGF-GNSQTVGKVCKLKKSLYGLKQSPRAWFDRFRHAVCDMGYSQCNGDHTVFYKHR 1067

Query: 714  SGGRTYLLVYVDDIIITGDDASGIVQIKESLGKSFEVKNLGPVRYFLGIEIARSPKGISL 893
                T L VYVDDI+ITGDD   I  +KE LGK+FEVK+LGP+RYFLGIEIARS KGI L
Sbjct: 1068 GTHITILAVYVDDIVITGDDVEEIRCLKERLGKAFEVKDLGPLRYFLGIEIARSSKGIVL 1127

Query: 894  SQRKYVLDLLTDTGMLGCRPVSTPMVPNSRLVADDGPLLSDPSAYQRLVGRLIYLVNTRP 1073
            SQRKYVLDLLTDTGMLGCR  +TP+  N +L A  G  + D  AYQRLVGRLIYL +TRP
Sbjct: 1128 SQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPV-DKEAYQRLVGRLIYLCHTRP 1186

Query: 1074 DIAYAVSRVSQFMHAPRQSHMDAVEHILKYLKSCPGLGLFYAAGSQGPLECYTDSDYGGS 1253
            DI+YAVS VS++MH PR  H+D V  IL+YLK  PG GL++       +E Y D+D+  S
Sbjct: 1187 DISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVEGYCDADWASS 1246

Query: 1254 IDS-RSTTGLCAFRGNHLIXXXXXXXXXXXXXXAEAEYRALALGTCEIMWLRSILGELGF 1430
            +D  RST+G C F G +L+              AEAEYRA+AL   E++W+RS+L EL  
Sbjct: 1247 MDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAEYRAMALSLSEMLWMRSLLTELRV 1306

Query: 1431 AQSGSSVLHCDNQAAIHLASDSVLHERTKHIEIDVHFLREKVRAGIVSPSFVRTKAQIAD 1610
             +S + +LHCDN++AI +A++ V H+RTKH+EID  F++EK+ +G++   ++++  Q+AD
Sbjct: 1307 LRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDRFFIKEKIDSGVLRLEYIKSCEQLAD 1366

Query: 1611 TLTKPVGPADLRSSIGKLGLLDIFAPA 1691
             LTK +GP++++S   K+G++DIF P+
Sbjct: 1367 CLTKGLGPSEIQSICNKMGMIDIFCPS 1393


>gb|ABA93730.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 656

 Score =  580 bits (1494), Expect = e-163
 Identities = 292/567 (51%), Positives = 389/567 (68%), Gaps = 4/567 (0%)
 Frame = +3

Query: 3    PVVEPPRFPSRTRHPPDKYGFP---TNHPIAQFVSYQGVSASYQTYLTXXXXXXXXXXXX 173
            P+ +     S    PP + GF    + H IA +++Y  VS +Y+T++             
Sbjct: 92   PLAQRRETRSNAGRPPIRLGFEHLSSMHDIANYITYSHVSPAYKTFIASLQTMPIPKDWK 151

Query: 174  EALSDPHWVAAMQAEMTALEQNQTWEMVALPPKTRPVGCKWVFTVKYLADGTVERYKARL 353
             A  DP W  AM+ E+ AL +N+TWE+V LPP+ R VGCKWVFTVK   +G V+RYKARL
Sbjct: 152  CAKQDPKWKDAMKEELNALVKNKTWELVKLPPEKRAVGCKWVFTVKQTPEGKVDRYKARL 211

Query: 354  VAKGFTQVPGRDFGATFAPVAKLKSVRLLISLAASYDWPLHQLDVKNAFLHGDLAETIYM 533
            VAKG++Q  G D+  TFAPVAK+  VR L+S A ++ WPLHQLDVKNAFLHGDL E +YM
Sbjct: 212  VAKGYSQTYGIDYDETFAPVAKMGIVRALVSCAVNFGWPLHQLDVKNAFLHGDLHEEVYM 271

Query: 534  DPPPGFRGEGEYARKVCRLRKSLYGLKQSPRAWFSRFSEVVLQYGFTRCHSDHTLFVRRN 713
            + PPGF G  +   KVC+L+KSLYGLKQSPRAWF RF   V   G+++C+ DHT+F +  
Sbjct: 272  EIPPGF-GNSQTVGKVCKLKKSLYGLKQSPRAWFDRFRHAVCDMGYSQCNGDHTVFYKHR 330

Query: 714  SGGRTYLLVYVDDIIITGDDASGIVQIKESLGKSFEVKNLGPVRYFLGIEIARSPKGISL 893
                T L VYVDDI+ITGDD   I  +KE LGK+FEVK+LGP+RYFLGIEIARS KGI L
Sbjct: 331  GTNITILAVYVDDIVITGDDVEEIRCLKERLGKAFEVKDLGPLRYFLGIEIARSSKGIVL 390

Query: 894  SQRKYVLDLLTDTGMLGCRPVSTPMVPNSRLVADDGPLLSDPSAYQRLVGRLIYLVNTRP 1073
            SQRKYVLDLLTDTGMLGCR  +TP+  N +L A  G  + +  AYQRLVGRLIYL +TRP
Sbjct: 391  SQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPV-NKEAYQRLVGRLIYLCHTRP 449

Query: 1074 DIAYAVSRVSQFMHAPRQSHMDAVEHILKYLKSCPGLGLFYAAGSQGPLECYTDSDYGGS 1253
            DI+Y VS VS++MH PR  H+D V  IL+YLK  PG GL++       +E Y D+D+  S
Sbjct: 450  DISYVVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVEGYCDADWASS 509

Query: 1254 IDS-RSTTGLCAFRGNHLIXXXXXXXXXXXXXXAEAEYRALALGTCEIMWLRSILGELGF 1430
            +D  RST+G C F G +L+              AEAEYRA+AL   E++W+RS+L EL  
Sbjct: 510  MDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAEYRAMALSLSEMLWMRSLLTELRV 569

Query: 1431 AQSGSSVLHCDNQAAIHLASDSVLHERTKHIEIDVHFLREKVRAGIVSPSFVRTKAQIAD 1610
             +S + +LHCDN++AI +A++ V H+RTKH+EID  F++EK+ +G++   ++++  Q+AD
Sbjct: 570  LRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDRFFIKEKIDSGVLRLEYIKSCEQLAD 629

Query: 1611 TLTKPVGPADLRSSIGKLGLLDIFAPA 1691
             LTK +GP++++S   K+G++DIF P+
Sbjct: 630  CLTKGLGPSEIQSICNKMGMIDIFCPS 656


>gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 936

 Score =  570 bits (1469), Expect = e-160
 Identities = 287/561 (51%), Positives = 384/561 (68%), Gaps = 7/561 (1%)
 Frame = +3

Query: 30   SRTRHPPDKYGFPTN------HPIAQFVSYQGVSASYQTYLTXXXXXXXXXXXXEALSDP 191
            S    PP +YGF         + IA +VSY  +S++Y+ ++T            EA  DP
Sbjct: 378  SNAGKPPQRYGFEAQGVNDDENNIANYVSYASLSSTYKAFVTSLNSVEIPNDWREAKQDP 437

Query: 192  HWVAAMQAEMTALEQNQTWEMVALPPKTRPVGCKWVFTVKYLADGTVERYKARLVAKGFT 371
             W  AM  E+ ALE+N+TW++V  P   + V CKWV+TVK   DG VERYKARLVAKG++
Sbjct: 438  RWHQAMLEELEALEKNKTWDLVPFPKGKKVVNCKWVYTVKQNPDGNVERYKARLVAKGYS 497

Query: 372  QVPGRDFGATFAPVAKLKSVRLLISLAASYDWPLHQLDVKNAFLHGDLAETIYMDPPPGF 551
            Q  G D+  TFAPVAK+  VR LIS AA++DWPLHQLDVKNAFLHGDL E +YM+ PPGF
Sbjct: 498  QTYGIDYDETFAPVAKMSMVRTLISCAANFDWPLHQLDVKNAFLHGDLQEEVYMEIPPGF 557

Query: 552  RGEGEYARKVCRLRKSLYGLKQSPRAWFSRFSEVVLQYGFTRCHSDHTLFVRRNSGGRTY 731
                +   KV RL+KSLYGLKQSPRAWF RF   +   G+ +C+ DHT+F R N G +T 
Sbjct: 558  -ATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYKQCNGDHTVFYRHNRGLKTI 616

Query: 732  LLVYVDDIIITGDDASGIVQIKESLGKSFEVKNLGPVRYFLGIEIARSPKGISLSQRKYV 911
            L+VYVDD+IITGDD   I ++K++L K FEVK+LG ++YFLGIEIARSP+GI LSQRKYV
Sbjct: 617  LVVYVDDMIITGDDCLEISRLKQNLSKEFEVKDLGQLKYFLGIEIARSPRGIVLSQRKYV 676

Query: 912  LDLLTDTGMLGCRPVSTPMVPNSRLVADDGPLLSDPSAYQRLVGRLIYLVNTRPDIAYAV 1091
            LDLL+DTGMLGCRP STP+  N +L A+ G  + +   YQRLVGRLIYL +TRPDI YAV
Sbjct: 677  LDLLSDTGMLGCRPASTPIEQNHKLCAESGDPV-NKERYQRLVGRLIYLCHTRPDITYAV 735

Query: 1092 SRVSQFMHAPRQSHMDAVEHILKYLKSCPGLGLFYAAGSQGPLECYTDSDYGGSIDS-RS 1268
            S VS++MH PR  HMD V  IL+YLK+ PG G+++       +E Y D+D+G  +D  RS
Sbjct: 736  SVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKNGHLDVEGYCDADWGSCLDDRRS 795

Query: 1269 TTGLCAFRGNHLIXXXXXXXXXXXXXXAEAEYRALALGTCEIMWLRSILGELGFAQSGSS 1448
            T+G C F G +L+              AEAEYR++++   E++WL+++L EL  + S S 
Sbjct: 796  TSGYCVFIGGNLVSWRSKKQSVVSRSTAEAEYRSMSMSLSELLWLKNLLAELKLSTSTSM 855

Query: 1449 VLHCDNQAAIHLASDSVLHERTKHIEIDVHFLREKVRAGIVSPSFVRTKAQIADTLTKPV 1628
             L CDN++AI++A++ V H+RTKH+EID  F++E++  G ++  FV +  Q+AD+LTK +
Sbjct: 856  KLWCDNKSAINIANNPVQHDRTKHVEIDRFFIKERMDEGTLNLGFVNSGEQVADSLTKAL 915

Query: 1629 GPADLRSSIGKLGLLDIFAPA 1691
            G  +  SS  K+G++DI+ P+
Sbjct: 916  GARECTSSCSKMGMIDIYRPS 936


>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1588

 Score =  570 bits (1468), Expect = e-160
 Identities = 286/567 (50%), Positives = 385/567 (67%), Gaps = 4/567 (0%)
 Frame = +3

Query: 3    PVVEPPRFPSRTRHPPDKYGFP---TNHPIAQFVSYQGVSASYQTYLTXXXXXXXXXXXX 173
            P+ +     S    PP + GF    + H IA ++SY  +S +Y+ ++             
Sbjct: 1024 PLAQRRETRSNAGRPPIRLGFEHLSSRHDIANYISYSHISPAYKAFIASLQIVPIPKDWR 1083

Query: 174  EALSDPHWVAAMQAEMTALEQNQTWEMVALPPKTRPVGCKWVFTVKYLADGTVERYKARL 353
             A  DP W  AM+ E+ ALE+N+TWE+V LP   R VGCKWVFTVK   +G V+RYKARL
Sbjct: 1084 CAKQDPRWKDAMKEELRALEKNKTWELVKLPMGKRAVGCKWVFTVKQTPEGKVDRYKARL 1143

Query: 354  VAKGFTQVPGRDFGATFAPVAKLKSVRLLISLAASYDWPLHQLDVKNAFLHGDLAETIYM 533
            VAKG++Q  G D+  TFAPVAK+ +VR+LIS A ++ WPLHQLDVKNAFLHGDL E +YM
Sbjct: 1144 VAKGYSQTYGIDYDETFAPVAKMSTVRILISCAVNFGWPLHQLDVKNAFLHGDLQEEVYM 1203

Query: 534  DPPPGFRGEGEYARKVCRLRKSLYGLKQSPRAWFSRFSEVVLQYGFTRCHSDHTLFVRRN 713
            + PPGF G  +   KVCRL+KSLYGLKQSPRAWF RF   +   G+++C+ DHT+F R  
Sbjct: 1204 EIPPGF-GNSQTVGKVCRLKKSLYGLKQSPRAWFDRFRRALCNMGYSQCNGDHTVFYRHR 1262

Query: 714  SGGRTYLLVYVDDIIITGDDASGIVQIKESLGKSFEVKNLGPVRYFLGIEIARSPKGISL 893
                T L VYVDDI+ITGDD   I  +K+ LG++FEVK+LGP+RYFLGIE+ARS KGI L
Sbjct: 1263 GAHITILAVYVDDIVITGDDVEEIKCLKQRLGEAFEVKDLGPLRYFLGIEVARSSKGIVL 1322

Query: 894  SQRKYVLDLLTDTGMLGCRPVSTPMVPNSRLVADDGPLLSDPSAYQRLVGRLIYLVNTRP 1073
            SQRKYVLDLLT+TGMLGCR  +TP+  N +L A  G  + D   YQRLVGRLIYL +TRP
Sbjct: 1323 SQRKYVLDLLTETGMLGCRTSATPIDRNHQLSAQSGDPV-DRETYQRLVGRLIYLCHTRP 1381

Query: 1074 DIAYAVSRVSQFMHAPRQSHMDAVEHILKYLKSCPGLGLFYAAGSQGPLECYTDSDYGGS 1253
            DI+YAVS VS++MH PR +H++ V  IL+YLK  PG GL++       +E Y D+D+  S
Sbjct: 1382 DISYAVSVVSRYMHDPRTTHLEVVHRILRYLKGTPGKGLWFRKNQHLDVEGYCDADWASS 1441

Query: 1254 IDS-RSTTGLCAFRGNHLIXXXXXXXXXXXXXXAEAEYRALALGTCEIMWLRSILGELGF 1430
            +D  RST+G C F G +++              AEAEYRA+AL   E++W++++L EL  
Sbjct: 1442 VDDRRSTSGYCVFVGGNVVCWRSKKQAVVAQSTAEAEYRAMALSLSEMLWVKNLLLELRL 1501

Query: 1431 AQSGSSVLHCDNQAAIHLASDSVLHERTKHIEIDVHFLREKVRAGIVSPSFVRTKAQIAD 1610
             ++ + VLHCDN+ AI++A++ V H+RTKHIEID  F++EK+ +  +   ++++  Q+AD
Sbjct: 1502 FRNNTVVLHCDNKFAINIANNPVQHDRTKHIEIDRFFIKEKIDSRALRLQYIKSSEQLAD 1561

Query: 1611 TLTKPVGPADLRSSIGKLGLLDIFAPA 1691
             LTK +GP+   S   K+G++DIF P+
Sbjct: 1562 CLTKGLGPSQSESMCNKMGMIDIFCPS 1588


>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|355486266|gb|AES67469.1|
            Beta-galactosidase [Medicago truncatula]
          Length = 2260

 Score =  565 bits (1457), Expect = e-158
 Identities = 290/561 (51%), Positives = 385/561 (68%), Gaps = 7/561 (1%)
 Frame = +3

Query: 6    VVEPPRFPSRTRH--PPDKYGFPTN----HPIAQFVSYQGVSASYQTYLTXXXXXXXXXX 167
            VV     P RT    PP +Y    N    +PI  +VS+Q +S SY  Y +          
Sbjct: 1374 VVSTYTLPPRTNRGQPPIRYEPDPNCKLKYPINNYVSFQKLSKSYANYASQLSIASTPSN 1433

Query: 168  XXEALSDPHWVAAMQAEMTALEQNQTWEMVALPPKTRPVGCKWVFTVKYLADGTVERYKA 347
              EAL+D  W  AM AEM ALE+N TWE+V+LP     VGC+WVFT+K+ ADG+VER+KA
Sbjct: 1434 LQEALADLRWTQAMTAEMEALEKNATWELVSLPVGKSTVGCRWVFTIKHKADGSVERFKA 1493

Query: 348  RLVAKGFTQVPGRDFGATFAPVAKLKSVRLLISLAASYDWPLHQLDVKNAFLHGDLAETI 527
            RLVAKG+TQ  G D+  TFAPVAKL +VR+L+SLAA+ DWPL Q DVKNAFLHGDL E +
Sbjct: 1494 RLVAKGYTQSYGVDYEETFAPVAKLNTVRVLLSLAANQDWPLLQFDVKNAFLHGDLIEEV 1553

Query: 528  YMDPPPGFRGEGEYARKVCRLRKSLYGLKQSPRAWFSRFSEVVLQYGFTRCHSDHTLFVR 707
            YMDPPPG       +  VC+L+K+LYGLKQSPRAWF RF++ +  +G+T+ +SDHTLF++
Sbjct: 1554 YMDPPPGIPRYSNIS-MVCKLKKALYGLKQSPRAWFGRFTKSMKFFGYTQSNSDHTLFLK 1612

Query: 708  RNSGGRTYLLVYVDDIIITGDDASGIVQIKESLGKSFEVKNLGPVRYFLGIEIARSPKGI 887
             N G  T L++YVDD+I+TG+D + I  ++  L  +F++K LG ++YFLGIE+ARS  GI
Sbjct: 1613 HNHGKITALIIYVDDMIVTGNDPNEISSLQRYLASNFDMKQLGDLKYFLGIEVARSKHGI 1672

Query: 888  SLSQRKYVLDLLTDTGMLGCRPVSTPMVPNSRLVADDGPLLSDPSAYQRLVGRLIYLVNT 1067
             LSQRKYVLDLLT+TGMLGC+P+ TP+  N +         +D   YQRLVG+LIYL +T
Sbjct: 1673 FLSQRKYVLDLLTETGMLGCKPIETPIEQNHKNFCCADAPSTDRQRYQRLVGKLIYLSHT 1732

Query: 1068 RPDIAYAVSRVSQFMHAPRQSHMDAVEHILKYLKSCPGLGLFYAAGSQGPLECYTDSDYG 1247
            RPDIAYAV+ VSQFMH PR+ HMDAVE IL+YLKS PG GL ++      +E YTD+D+ 
Sbjct: 1733 RPDIAYAVNVVSQFMHDPRKPHMDAVERILRYLKSAPGKGLLFSNHGHLKVEGYTDADWA 1792

Query: 1248 GSIDSR-STTGLCAFRGNHLIXXXXXXXXXXXXXXAEAEYRALALGTCEIMWLRSILGEL 1424
            GS D R ST G   F G +L+              AEAE+R +A+G CE++W++++L +L
Sbjct: 1793 GSADDRKSTAGYLTFVGGNLVTWRSKKQQVVARSSAEAEFRGMAVGICELLWIKNLLKDL 1852

Query: 1425 GFAQSGSSVLHCDNQAAIHLASDSVLHERTKHIEIDVHFLREKVRAGIVSPSFVRTKAQI 1604
            G  Q  +  L+CDN++AI +A + V H+RTKH+EID HF++EK+ AGI++  FV+++ Q+
Sbjct: 1853 GCEQEDAMKLYCDNKSAIEIAHNPVQHDRTKHVEIDRHFIKEKIEAGIIAFPFVKSEQQL 1912

Query: 1605 ADTLTKPVGPADLRSSIGKLG 1667
            AD LTK V    L  S+ KLG
Sbjct: 1913 ADMLTKAVTSRTLAGSLDKLG 1933