BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006570
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasilie...   160   2e-37
gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatr...   159   6e-37
ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [S...   158   1e-36
ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E...   157   1e-36
ref|XP_002278114.1| PREDICTED: small nuclear ribonucleoprotein E...   157   1e-36

>gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasiliensis]
          Length = 88

 Score =  160 bits (406), Expect = 2e-37
 Identities = 80/86 (93%), Positives = 84/86 (97%)
 Frame = -2

Query: 614 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFQQKDVRIEGRIIGFDEYMNLVLDDAEEV 435
           MA+T+VQRIMTQPINLIFRFLQSKARIQIWLF+QKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 434 NIKKKTRSSLGRILLKGDNITLMQNT 357
           NIKKKTR SLGRILLKGDNITLM NT
Sbjct: 61  NIKKKTRKSLGRILLKGDNITLMMNT 86


>gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatropha curcas]
          Length = 88

 Score =  159 bits (401), Expect = 6e-37
 Identities = 78/86 (90%), Positives = 84/86 (97%)
 Frame = -2

Query: 614 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFQQKDVRIEGRIIGFDEYMNLVLDDAEEV 435
           MA+T+VQRIMTQPINLIFRFLQSKARIQIWLF+QKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 434 NIKKKTRSSLGRILLKGDNITLMQNT 357
           N+KKKTR SLGRILLKGDNITLM N+
Sbjct: 61  NVKKKTRKSLGRILLKGDNITLMMNS 86


>ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [Sorghum bicolor]
           gi|241926921|gb|EES00066.1| hypothetical protein
           SORBIDRAFT_03g001950 [Sorghum bicolor]
          Length = 88

 Score =  158 bits (399), Expect = 1e-36
 Identities = 77/86 (89%), Positives = 83/86 (96%)
 Frame = -2

Query: 614 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFQQKDVRIEGRIIGFDEYMNLVLDDAEEV 435
           MA+T+VQRIMTQPINLIFRFLQSKARIQIWLF+QKD+RIEGRIIGFDEYMNLVLDDAEE+
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI 60

Query: 434 NIKKKTRSSLGRILLKGDNITLMQNT 357
           N+KK TR SLGRILLKGDNITLM NT
Sbjct: 61  NVKKNTRKSLGRILLKGDNITLMMNT 86


>ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|255627911|gb|ACU14300.1| unknown [Glycine max]
          Length = 88

 Score =  157 bits (398), Expect = 1e-36
 Identities = 77/86 (89%), Positives = 84/86 (97%)
 Frame = -2

Query: 614 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFQQKDVRIEGRIIGFDEYMNLVLDDAEEV 435
           MA+T+VQR+MTQPINLIFRFLQSKARIQIWLF+QKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 434 NIKKKTRSSLGRILLKGDNITLMQNT 357
           NIKKK+R +LGRILLKGDNITLM NT
Sbjct: 61  NIKKKSRKTLGRILLKGDNITLMMNT 86


>ref|XP_002278114.1| PREDICTED: small nuclear ribonucleoprotein E [Vitis vinifera]
           gi|297734216|emb|CBI15463.3| unnamed protein product
           [Vitis vinifera]
          Length = 88

 Score =  157 bits (398), Expect = 1e-36
 Identities = 77/86 (89%), Positives = 83/86 (96%)
 Frame = -2

Query: 614 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFQQKDVRIEGRIIGFDEYMNLVLDDAEEV 435
           MATT+VQRIMTQPINLIFRFLQSKARIQIWLF+QKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MATTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 434 NIKKKTRSSLGRILLKGDNITLMQNT 357
           N+KK T+ +LGRILLKGDNITLM NT
Sbjct: 61  NVKKNTKKTLGRILLKGDNITLMMNT 86