BLASTX nr result

ID: Coptis25_contig00006564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006564
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21845.3| unnamed protein product [Vitis vinifera]              149   1e-33
emb|CAN81333.1| hypothetical protein VITISV_021624 [Vitis vinifera]   148   2e-33
ref|XP_002273967.1| PREDICTED: uncharacterized protein LOC100267...   148   3e-33
ref|XP_002517923.1| conserved hypothetical protein [Ricinus comm...   145   1e-32
ref|XP_002330628.1| predicted protein [Populus trichocarpa] gi|2...   138   2e-30

>emb|CBI21845.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  149 bits (377), Expect = 1e-33
 Identities = 76/132 (57%), Positives = 86/132 (65%)
 Frame = +1

Query: 52  STAQTNRDEPLNFILIDGTWNNSAAMFRRLKERAELVWGEEDLPCISLDTLGASKMHRLR 231
           S+  TNR++ LNFILIDGTWNNSAAMFRRLKE+A+L WGEEDLPCISL  +GAS MH+LR
Sbjct: 260 SSTTTNREKILNFILIDGTWNNSAAMFRRLKEQAKLAWGEEDLPCISL-AMGASAMHKLR 318

Query: 232 PQPSWDRTCTXXXXXXXXXXXXXXPEFSSHGLDKQXXXXXXXXXXXXXXXXXXXXXMGRS 411
           PQPSWDRTCT              PEF S+GLDKQ                     MGRS
Sbjct: 319 PQPSWDRTCTAAAAIGLLSELQLIPEFGSYGLDKQAEAVEDALAVLLEALTARRLRMGRS 378

Query: 412 ITRTERHKGDIC 447
           I+R +RH  DIC
Sbjct: 379 ISRKQRHNTDIC 390


>emb|CAN81333.1| hypothetical protein VITISV_021624 [Vitis vinifera]
          Length = 401

 Score =  148 bits (374), Expect = 2e-33
 Identities = 75/129 (58%), Positives = 85/129 (65%)
 Frame = +1

Query: 61  QTNRDEPLNFILIDGTWNNSAAMFRRLKERAELVWGEEDLPCISLDTLGASKMHRLRPQP 240
           +TNR++ LNFILIDGTWNNSAAMFRRLKE+A+L WGEEDLPCISL  +GAS MH+LRPQP
Sbjct: 274 RTNREKILNFILIDGTWNNSAAMFRRLKEQAKLAWGEEDLPCISL-AMGASAMHKLRPQP 332

Query: 241 SWDRTCTXXXXXXXXXXXXXXPEFSSHGLDKQXXXXXXXXXXXXXXXXXXXXXMGRSITR 420
           SWDRTCT              PEF S+GLDKQ                     MGRSI+R
Sbjct: 333 SWDRTCTAAAAIGLLSELQLIPEFGSYGLDKQAEAVEDALAVLLEALTARRLRMGRSISR 392

Query: 421 TERHKGDIC 447
            +RH  DIC
Sbjct: 393 KQRHNTDIC 401


>ref|XP_002273967.1| PREDICTED: uncharacterized protein LOC100267683 [Vitis vinifera]
          Length = 401

 Score =  148 bits (373), Expect = 3e-33
 Identities = 75/128 (58%), Positives = 84/128 (65%)
 Frame = +1

Query: 64  TNRDEPLNFILIDGTWNNSAAMFRRLKERAELVWGEEDLPCISLDTLGASKMHRLRPQPS 243
           TNR++ LNFILIDGTWNNSAAMFRRLKE+A+L WGEEDLPCISL  +GAS MH+LRPQPS
Sbjct: 275 TNREKILNFILIDGTWNNSAAMFRRLKEQAKLAWGEEDLPCISL-AMGASAMHKLRPQPS 333

Query: 244 WDRTCTXXXXXXXXXXXXXXPEFSSHGLDKQXXXXXXXXXXXXXXXXXXXXXMGRSITRT 423
           WDRTCT              PEF S+GLDKQ                     MGRSI+R 
Sbjct: 334 WDRTCTAAAAIGLLSELQLIPEFGSYGLDKQAEAVEDALAVLLEALTARRLRMGRSISRK 393

Query: 424 ERHKGDIC 447
           +RH  DIC
Sbjct: 394 QRHNTDIC 401


>ref|XP_002517923.1| conserved hypothetical protein [Ricinus communis]
           gi|223542905|gb|EEF44441.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score =  145 bits (367), Expect = 1e-32
 Identities = 76/135 (56%), Positives = 86/135 (63%)
 Frame = +1

Query: 31  GGNFHIDSTAQTNRDEPLNFILIDGTWNNSAAMFRRLKERAELVWGEEDLPCISLDTLGA 210
           GGN H+DSTAQ N  + LNF+LIDGTW+NSAAMFRRLKE+ + VWGEEDLPCISL T GA
Sbjct: 159 GGNCHVDSTAQANEHKTLNFVLIDGTWSNSAAMFRRLKEQTKSVWGEEDLPCISLAT-GA 217

Query: 211 SKMHRLRPQPSWDRTCTXXXXXXXXXXXXXXPEFSSHGLDKQXXXXXXXXXXXXXXXXXX 390
           S MH+LRPQPS+DRTCT              PE SS+GLDKQ                  
Sbjct: 218 SMMHKLRPQPSYDRTCTAGAAIGLLSELQDLPELSSYGLDKQAEALEDSLDVLLEALTTR 277

Query: 391 XXXMGRSITRTERHK 435
              MGRSITR  R +
Sbjct: 278 RLRMGRSITRKVRQQ 292


>ref|XP_002330628.1| predicted protein [Populus trichocarpa] gi|222872232|gb|EEF09363.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  138 bits (348), Expect = 2e-30
 Identities = 71/132 (53%), Positives = 81/132 (61%)
 Frame = +1

Query: 52  STAQTNRDEPLNFILIDGTWNNSAAMFRRLKERAELVWGEEDLPCISLDTLGASKMHRLR 231
           +T  TN  +PLNFILIDGTW+NSAAMF RLKE+ + VWG EDLPCISL + G S MH+LR
Sbjct: 232 NTTMTNEYKPLNFILIDGTWSNSAAMFNRLKEKTKSVWGVEDLPCISL-SAGVSTMHKLR 290

Query: 232 PQPSWDRTCTXXXXXXXXXXXXXXPEFSSHGLDKQXXXXXXXXXXXXXXXXXXXXXMGRS 411
           PQPSWDRTCT              P+FSS+GLDKQ                     MGRS
Sbjct: 291 PQPSWDRTCTAAAAIGLLSELQVLPQFSSYGLDKQNEALENAVDVLLEALTARRLRMGRS 350

Query: 412 ITRTERHKGDIC 447
           ITR  RH  +IC
Sbjct: 351 ITRRLRHSSNIC 362


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