BLASTX nr result

ID: Coptis25_contig00006561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006561
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314262.1| predicted protein [Populus trichocarpa] gi|1...   108   6e-22
ref|XP_004147271.1| PREDICTED: uncharacterized protein LOC101215...   105   5e-21
ref|XP_003569039.1| PREDICTED: uncharacterized protein LOC100831...   103   1e-20
gb|AAT39315.2| Senescence-associated protein, putative [Solanum ...   103   1e-20
ref|XP_002526335.1| conserved hypothetical protein [Ricinus comm...   103   2e-20

>ref|XP_002314262.1| predicted protein [Populus trichocarpa] gi|118487628|gb|ABK95639.1|
           unknown [Populus trichocarpa]
           gi|222850670|gb|EEE88217.1| predicted protein [Populus
           trichocarpa]
          Length = 284

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/84 (58%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = +1

Query: 4   YVNETLWDSGGGST-STDCQRWNNDQETLCYNCDSCKAGVLASLKKSWRKXXXXXXXXXX 180
           Y+NET W S GG   STDC  WNNDQE LCY+C+SCKAG+LA+L+KSWRK          
Sbjct: 185 YMNETFWSSSGGVVYSTDCNTWNNDQERLCYSCNSCKAGLLANLRKSWRKVSVINIVILI 244

Query: 181 XXXXXXXXGCAAFRNNKRMDNDEP 252
                   GCAAFRNN+R+DNDEP
Sbjct: 245 ILVIAYVVGCAAFRNNRRIDNDEP 268


>ref|XP_004147271.1| PREDICTED: uncharacterized protein LOC101215618 [Cucumis sativus]
           gi|449501210|ref|XP_004161308.1| PREDICTED:
           uncharacterized LOC101215618 [Cucumis sativus]
          Length = 285

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/86 (59%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   VYVNETLWDSGGGSTS--TDCQRWNNDQETLCYNCDSCKAGVLASLKKSWRKXXXXXXXX 174
           VYVNET+WD GGG      DC RW+NDQ  LCY CDSCKA VLASLKKSWRK        
Sbjct: 184 VYVNETMWDFGGGLVGGEPDCGRWSNDQRQLCYACDSCKAAVLASLKKSWRKVSVINIIA 243

Query: 175 XXXXXXXXXXGCAAFRNNKRMDNDEP 252
                     G AAFRNN+R+DNDEP
Sbjct: 244 LIILVISYVIGYAAFRNNRRIDNDEP 269


>ref|XP_003569039.1| PREDICTED: uncharacterized protein LOC100831242 [Brachypodium
           distachyon]
          Length = 294

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/87 (56%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
 Frame = +1

Query: 4   YVNETLWDSGGGSTST----DCQRWNNDQETLCYNCDSCKAGVLASLKKSWRKXXXXXXX 171
           YVNET W    G  +     DCQ+WNNDQ+TLC+ CDSCKAGVLA +KKSWRK       
Sbjct: 192 YVNETYWTPNPGVQTVVSDPDCQKWNNDQQTLCFQCDSCKAGVLAGIKKSWRKVAIINIV 251

Query: 172 XXXXXXXXXXXGCAAFRNNKRMDNDEP 252
                      GCAAFRN KRMDNDEP
Sbjct: 252 MLIILVIVYVAGCAAFRNAKRMDNDEP 278


>gb|AAT39315.2| Senescence-associated protein, putative [Solanum demissum]
          Length = 125

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/86 (58%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   VYVNETLWDSGGG--STSTDCQRWNNDQETLCYNCDSCKAGVLASLKKSWRKXXXXXXXX 174
           VY NET+W  GGG      DC +W+NDQE LCYNCDSCKAGVLASLKKSWRK        
Sbjct: 24  VYQNETVWIPGGGLVGADPDCVKWSNDQEQLCYNCDSCKAGVLASLKKSWRKVSVINIVI 83

Query: 175 XXXXXXXXXXGCAAFRNNKRMDNDEP 252
                       AAFR+NKR+DNDEP
Sbjct: 84  LILLVIMYMVAIAAFRHNKRIDNDEP 109


>ref|XP_002526335.1| conserved hypothetical protein [Ricinus communis]
           gi|223534294|gb|EEF36006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +1

Query: 4   YVNETLWDSGGGST-STDCQRWNNDQETLCYNCDSCKAGVLASLKKSWRKXXXXXXXXXX 180
           YVNET+W S GG   + DC  W+NDQE LCY+C+SCKAGVL S++KSWRK          
Sbjct: 185 YVNETVWTSVGGVVYNPDCNNWSNDQEQLCYSCNSCKAGVLGSIRKSWRKVSVINIVILI 244

Query: 181 XXXXXXXXGCAAFRNNKRMDNDEP 252
                   GCAAFRNN+R+DNDEP
Sbjct: 245 ILVIAYVIGCAAFRNNRRIDNDEP 268


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