BLASTX nr result

ID: Coptis25_contig00006558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006558
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogen...   140   1e-31
ref|XP_003570336.1| PREDICTED: succinate-semialdehyde dehydrogen...   139   3e-31
ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogen...   138   4e-31
ref|XP_002315079.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
ref|NP_001233841.1| succinic semialdehyde dehydrogenase [Solanum...   137   9e-31

>ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
           [Cucumis sativus]
          Length = 541

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/74 (87%), Positives = 71/74 (95%)
 Frame = -3

Query: 487 TNAGLAAYVFTTNVQRSWRVAEALECGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGM 308
           TNAGLAAY+FT N+QRSWRV EALE G+VGVNEG+ISTEVAPFGGVKQSGLGREGSKYGM
Sbjct: 465 TNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 524

Query: 307 DDYLEVKYVCLGNM 266
           D+YLE+KYVCLGNM
Sbjct: 525 DEYLELKYVCLGNM 538


>ref|XP_003570336.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
           [Brachypodium distachyon]
          Length = 529

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/75 (85%), Positives = 73/75 (97%)
 Frame = -3

Query: 487 TNAGLAAYVFTTNVQRSWRVAEALECGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGM 308
           TNAGLAAY+FTT++ RSWRV+EALE GLVGVNEG+ISTEVAPFGGVKQSGLGREGSKYGM
Sbjct: 455 TNAGLAAYMFTTSIPRSWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 514

Query: 307 DDYLEVKYVCLGNMS 263
           DD+LE+KYVC+GN+S
Sbjct: 515 DDFLEIKYVCMGNLS 529


>ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
           [Glycine max]
          Length = 537

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/77 (83%), Positives = 71/77 (92%)
 Frame = -3

Query: 487 TNAGLAAYVFTTNVQRSWRVAEALECGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGM 308
           TNAGL +Y+FT ++QRSWRVAEALE GLVGVNEG+ISTEVAPFGG KQSGLGREGSKYGM
Sbjct: 461 TNAGLGSYIFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGM 520

Query: 307 DDYLEVKYVCLGNMSSA 257
           D+YLE+KYVCLGNM  A
Sbjct: 521 DEYLEIKYVCLGNMHKA 537


>ref|XP_002315079.1| predicted protein [Populus trichocarpa] gi|222864119|gb|EEF01250.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/75 (86%), Positives = 71/75 (94%)
 Frame = -3

Query: 487 TNAGLAAYVFTTNVQRSWRVAEALECGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGM 308
           T AGLAAY+FT NVQRSWRV EALE GLVGVNEG+ISTEVAPFGGVKQSGLGREGSKYGM
Sbjct: 460 TKAGLAAYIFTNNVQRSWRVTEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 519

Query: 307 DDYLEVKYVCLGNMS 263
           D+YLE+KYVCLG+M+
Sbjct: 520 DEYLEMKYVCLGDMN 534


>ref|NP_001233841.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum]
           gi|171854593|dbj|BAG16487.1| succinic semialdehyde
           dehydrogenase [Solanum lycopersicum]
          Length = 522

 Score =  137 bits (345), Expect = 9e-31
 Identities = 62/75 (82%), Positives = 73/75 (97%)
 Frame = -3

Query: 487 TNAGLAAYVFTTNVQRSWRVAEALECGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGM 308
           TNAGLAAY+F+TN++R+WRV EALE G+VGVNEG++STEVAPFGGVKQSGLGREGSKYGM
Sbjct: 448 TNAGLAAYIFSTNIKRAWRVTEALEYGIVGVNEGLVSTEVAPFGGVKQSGLGREGSKYGM 507

Query: 307 DDYLEVKYVCLGNMS 263
           D+YLE+KYVCLG+MS
Sbjct: 508 DEYLEMKYVCLGSMS 522


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