BLASTX nr result

ID: Coptis25_contig00006543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006543
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145954.1| PREDICTED: uncharacterized protein LOC101208...   278   2e-72
ref|XP_002321938.1| predicted protein [Populus trichocarpa] gi|2...   276   9e-72
ref|XP_004160398.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   275   1e-71
ref|XP_003526780.1| PREDICTED: uncharacterized protein LOC100813...   273   8e-71
ref|XP_003523301.1| PREDICTED: uncharacterized protein LOC100775...   272   1e-70

>ref|XP_004145954.1| PREDICTED: uncharacterized protein LOC101208652 [Cucumis sativus]
          Length = 253

 Score =  278 bits (711), Expect = 2e-72
 Identities = 143/193 (74%), Positives = 157/193 (81%)
 Frame = -2

Query: 867 FMGTLTSDVTSAFPTPSPEAALNPXXXXXXXXXXXXSGGPMVQARNFAVMTGVNAGISCV 688
           FMGTLT+DV+S+ PTP  +A LNP            +GGP+VQARNFAVMTGVNAGIS V
Sbjct: 63  FMGTLTNDVSSSLPTP--QAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 687 MKRIRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANVLTSGLFFALVQGGLFKLGEKF 508
           MKR+RGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQA N +TSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180

Query: 507 SQPPAEDMYYSRTRGMLSNLGLQNYEKNFKKGXXXXXXXXXXXXXXLRDVKVPPGPRLLI 328
           SQPP ED+YY++TR ML+NLGLQ+YEKNFKKG              LRDVK+PPGPRLLI
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDSALRDVKIPPGPRLLI 240

Query: 327 LDHIQRNPGLRER 289
           LDHIQRNP LRER
Sbjct: 241 LDHIQRNPELRER 253


>ref|XP_002321938.1| predicted protein [Populus trichocarpa] gi|222868934|gb|EEF06065.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  276 bits (705), Expect = 9e-72
 Identities = 137/192 (71%), Positives = 156/192 (81%)
 Frame = -2

Query: 864 MGTLTSDVTSAFPTPSPEAALNPXXXXXXXXXXXXSGGPMVQARNFAVMTGVNAGISCVM 685
           MGT+T D++S+ PTP P+AALNP            +GGP++QARNFAVMTG NAGI+C+M
Sbjct: 66  MGTITPDISSSMPTP-PQAALNPQAMASLKQAQALAGGPLIQARNFAVMTGTNAGIACIM 124

Query: 684 KRIRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANVLTSGLFFALVQGGLFKLGEKFS 505
           KR+RGKEDVQSSMVAAFGSGAMFSLVSGMGGPN A N +TSGLFFALVQGGLFKLGEKFS
Sbjct: 125 KRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNNATNAITSGLFFALVQGGLFKLGEKFS 184

Query: 504 QPPAEDMYYSRTRGMLSNLGLQNYEKNFKKGXXXXXXXXXXXXXXLRDVKVPPGPRLLIL 325
           QPP ED++Y+RTR MLSNLGLQNYEKNFKKG              LRDV++PPGPRLLIL
Sbjct: 185 QPPTEDLHYARTRSMLSNLGLQNYEKNFKKGLLTDHTLPLLTDSALRDVRIPPGPRLLIL 244

Query: 324 DHIQRNPGLRER 289
           DHIQR+P LRE+
Sbjct: 245 DHIQRDPELREK 256


>ref|XP_004160398.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101208652
           [Cucumis sativus]
          Length = 253

 Score =  275 bits (704), Expect = 1e-71
 Identities = 142/193 (73%), Positives = 156/193 (80%)
 Frame = -2

Query: 867 FMGTLTSDVTSAFPTPSPEAALNPXXXXXXXXXXXXSGGPMVQARNFAVMTGVNAGISCV 688
           FMGTLT+DV+S+ PTP  +A LNP            +GGP+VQARNFAVMTGVNAGIS V
Sbjct: 63  FMGTLTNDVSSSLPTP--QAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 687 MKRIRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANVLTSGLFFALVQGGLFKLGEKF 508
           MKR+RGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQA N +TSGL FALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLXFALVQGGLFKLGEKF 180

Query: 507 SQPPAEDMYYSRTRGMLSNLGLQNYEKNFKKGXXXXXXXXXXXXXXLRDVKVPPGPRLLI 328
           SQPP ED+YY++TR ML+NLGLQ+YEKNFKKG              LRDVK+PPGPRLLI
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDSALRDVKIPPGPRLLI 240

Query: 327 LDHIQRNPGLRER 289
           LDHIQRNP LRER
Sbjct: 241 LDHIQRNPELRER 253


>ref|XP_003526780.1| PREDICTED: uncharacterized protein LOC100813121 [Glycine max]
          Length = 260

 Score =  273 bits (697), Expect = 8e-71
 Identities = 134/194 (69%), Positives = 157/194 (80%)
 Frame = -2

Query: 867 FMGTLTSDVTSAFPTPSPEAALNPXXXXXXXXXXXXSGGPMVQARNFAVMTGVNAGISCV 688
           FMGTLT+D +S FPTP P A+LNP            +GGP++QARNFAVMTGVNAGISCV
Sbjct: 63  FMGTLTADASSTFPTPPPNASLNPQAMASLKQAQALAGGPLIQARNFAVMTGVNAGISCV 122

Query: 687 MKRIRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANVLTSGLFFALVQGGLFKLGEKF 508
           +KRIRGKEDVQSSM AAFGSGA+FSLVSGMGGPNQA N LTSGLFFALVQGGLF++G+KF
Sbjct: 123 LKRIRGKEDVQSSMAAAFGSGALFSLVSGMGGPNQATNALTSGLFFALVQGGLFQIGQKF 182

Query: 507 SQPPAEDMYYSRTRGMLSNLGLQNYEKNFKKGXXXXXXXXXXXXXXLRDVKVPPGPRLLI 328
           SQPPAED +Y++TR ML+NLGLQ+YEKNFKKG              LRDV++PPGPRLLI
Sbjct: 183 SQPPAEDTHYAKTRHMLNNLGLQSYEKNFKKGLLTDNTLPLLTDSALRDVRIPPGPRLLI 242

Query: 327 LDHIQRNPGLRERQ 286
           LDHIQR+  L++++
Sbjct: 243 LDHIQRDADLKDKR 256


>ref|XP_003523301.1| PREDICTED: uncharacterized protein LOC100775460 [Glycine max]
          Length = 260

 Score =  272 bits (696), Expect = 1e-70
 Identities = 135/194 (69%), Positives = 156/194 (80%)
 Frame = -2

Query: 867 FMGTLTSDVTSAFPTPSPEAALNPXXXXXXXXXXXXSGGPMVQARNFAVMTGVNAGISCV 688
           FMGTLT+D +S FPTP P A+LNP            +GGP+VQARNFAVMTGVNAGISCV
Sbjct: 63  FMGTLTADASSTFPTPPPNASLNPQAMASLKQAQALAGGPLVQARNFAVMTGVNAGISCV 122

Query: 687 MKRIRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANVLTSGLFFALVQGGLFKLGEKF 508
           +KRIRGKEDVQSSM AAFGSGAMFSLVSGMGGPNQA N +TSGLFFALVQGGLF++G+KF
Sbjct: 123 LKRIRGKEDVQSSMAAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFQIGQKF 182

Query: 507 SQPPAEDMYYSRTRGMLSNLGLQNYEKNFKKGXXXXXXXXXXXXXXLRDVKVPPGPRLLI 328
           S PPAED +Y++TR ML+NLGLQ+YEKNFKKG              LRDV++PPGPRLLI
Sbjct: 183 SNPPAEDTHYAKTRHMLNNLGLQSYEKNFKKGLLTDNTLPLLTDSALRDVRIPPGPRLLI 242

Query: 327 LDHIQRNPGLRERQ 286
           LDHIQR+  L+E++
Sbjct: 243 LDHIQRDADLKEKR 256


Top