BLASTX nr result

ID: Coptis25_contig00006542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006542
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001065827.1| Os11g0162200 [Oryza sativa Japonica Group] g...    59   5e-07
gb|ABA91661.2| Ubiquinol-cytochrome c reductase complex 7.8 kDa ...    59   5e-07
ref|XP_003576272.1| PREDICTED: uncharacterized protein LOC100827...    59   6e-07
gb|EAY80071.1| hypothetical protein OsI_35238 [Oryza sativa Indi...    58   8e-07
ref|XP_002300923.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|NP_001065827.1| Os11g0162200 [Oryza sativa Japonica Group]
           gi|113644531|dbj|BAF27672.1| Os11g0162200 [Oryza sativa
           Japonica Group]
          Length = 69

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 29/37 (78%), Positives = 30/37 (81%)
 Frame = +3

Query: 426 MADEEPVDPKKYLEEHFGKPACVKILREYEACVKRIE 536
           MADEEPVDPKKYLEE   KP CVK L EYE CVKR+E
Sbjct: 1   MADEEPVDPKKYLEERC-KPQCVKPLYEYEKCVKRVE 36


>gb|ABA91661.2| Ubiquinol-cytochrome c reductase complex 7.8 kDa protein, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 76

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 29/37 (78%), Positives = 30/37 (81%)
 Frame = +3

Query: 426 MADEEPVDPKKYLEEHFGKPACVKILREYEACVKRIE 536
           MADEEPVDPKKYLEE   KP CVK L EYE CVKR+E
Sbjct: 1   MADEEPVDPKKYLEERC-KPQCVKPLYEYEKCVKRVE 36


>ref|XP_003576272.1| PREDICTED: uncharacterized protein LOC100827916 [Brachypodium
           distachyon]
          Length = 155

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 30/41 (73%), Positives = 31/41 (75%)
 Frame = +3

Query: 414 PSLTMADEEPVDPKKYLEEHFGKPACVKILREYEACVKRIE 536
           PS   ADEEPVDPKKYLEE   KP CVK L EYE CVKR+E
Sbjct: 83  PSPCGADEEPVDPKKYLEERC-KPQCVKPLYEYERCVKRVE 122


>gb|EAY80071.1| hypothetical protein OsI_35238 [Oryza sativa Indica Group]
           gi|222615572|gb|EEE51704.1| hypothetical protein
           OsJ_33084 [Oryza sativa Japonica Group]
          Length = 88

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 29/39 (74%), Positives = 30/39 (76%)
 Frame = +3

Query: 420 LTMADEEPVDPKKYLEEHFGKPACVKILREYEACVKRIE 536
           L  ADEEPVDPKKYLEE   KP CVK L EYE CVKR+E
Sbjct: 18  LAWADEEPVDPKKYLEERC-KPQCVKPLYEYEKCVKRVE 55


>ref|XP_002300923.1| predicted protein [Populus trichocarpa] gi|222842649|gb|EEE80196.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +3

Query: 426 MADEEPVDPKKYLEEHFGKPACVKILREYEACVKRIE 536
           MADEEPVDPKKYLEE   KP CV+ L EY+ACVKRI+
Sbjct: 1   MADEEPVDPKKYLEESC-KPKCVRPLLEYQACVKRIQ 36


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