BLASTX nr result

ID: Coptis25_contig00006533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006533
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis...   167   8e-40
emb|CBI29531.3| unnamed protein product [Vitis vinifera]              167   8e-40
ref|XP_002534264.1| microtubule associated protein xmap215, puta...   167   8e-40
ref|XP_002879562.1| hypothetical protein ARALYDRAFT_482523 [Arab...   162   3e-38
ref|XP_004162854.1| PREDICTED: LOW QUALITY PROTEIN: protein MOR1...   162   3e-38

>ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis vinifera]
          Length = 1007

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/112 (72%), Positives = 94/112 (83%)
 Frame = +3

Query: 3   LSRENIGNSVASPNASTDWNAALDMISFGSPEQSVEGIKVVCHELAQATDDPENTAIENL 182
           + R  +  ++ S N  TDWN ALD+ISFGSPEQSVEG+KVVCHELAQAT DPE +A++++
Sbjct: 432 MERHLMPRTLPSTNGPTDWNEALDIISFGSPEQSVEGMKVVCHELAQATSDPEGSAMDDI 491

Query: 183 IKDADKLVLCLAIKVPKTFDFILTGGSSRSCKYVLNTLMQTFQNKKLAHGVK 338
           +KDAD+LV CLA KV KTFDF LTG SSRSCKYVLNTLMQTFQNKKLAH VK
Sbjct: 492 LKDADRLVSCLANKVAKTFDFSLTGASSRSCKYVLNTLMQTFQNKKLAHAVK 543


>emb|CBI29531.3| unnamed protein product [Vitis vinifera]
          Length = 991

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/112 (72%), Positives = 94/112 (83%)
 Frame = +3

Query: 3   LSRENIGNSVASPNASTDWNAALDMISFGSPEQSVEGIKVVCHELAQATDDPENTAIENL 182
           + R  +  ++ S N  TDWN ALD+ISFGSPEQSVEG+KVVCHELAQAT DPE +A++++
Sbjct: 416 MERHLMPRTLPSTNGPTDWNEALDIISFGSPEQSVEGMKVVCHELAQATSDPEGSAMDDI 475

Query: 183 IKDADKLVLCLAIKVPKTFDFILTGGSSRSCKYVLNTLMQTFQNKKLAHGVK 338
           +KDAD+LV CLA KV KTFDF LTG SSRSCKYVLNTLMQTFQNKKLAH VK
Sbjct: 476 LKDADRLVSCLANKVAKTFDFSLTGASSRSCKYVLNTLMQTFQNKKLAHAVK 527


>ref|XP_002534264.1| microtubule associated protein xmap215, putative [Ricinus communis]
            gi|223525620|gb|EEF28119.1| microtubule associated
            protein xmap215, putative [Ricinus communis]
          Length = 1992

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/112 (72%), Positives = 95/112 (84%)
 Frame = +3

Query: 3    LSRENIGNSVASPNASTDWNAALDMISFGSPEQSVEGIKVVCHELAQATDDPENTAIENL 182
            + R+ + ++V S +  TDWN ALD+ISFGSPEQSVEG+KVVCHELAQAT DPE +A++ L
Sbjct: 1422 MDRQIMPHAVTSVSGPTDWNEALDIISFGSPEQSVEGMKVVCHELAQATGDPEGSAMDEL 1481

Query: 183  IKDADKLVLCLAIKVPKTFDFILTGGSSRSCKYVLNTLMQTFQNKKLAHGVK 338
            +KDAD+LV CLA KV KTFDF LTG SSRSCKYVLNTLMQTFQNK+LAH VK
Sbjct: 1482 VKDADRLVSCLASKVAKTFDFSLTGASSRSCKYVLNTLMQTFQNKRLAHAVK 1533


>ref|XP_002879562.1| hypothetical protein ARALYDRAFT_482523 [Arabidopsis lyrata subsp.
            lyrata] gi|297325401|gb|EFH55821.1| hypothetical protein
            ARALYDRAFT_482523 [Arabidopsis lyrata subsp. lyrata]
          Length = 1980

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/112 (71%), Positives = 90/112 (80%)
 Frame = +3

Query: 3    LSRENIGNSVASPNASTDWNAALDMISFGSPEQSVEGIKVVCHELAQATDDPENTAIENL 182
            L R  +  ++A  N  TDWN ALD+I FGSPEQSVEG+KVVCHELAQA++DPE +AI+ L
Sbjct: 1446 LERNPVPRTIAGVNGPTDWNEALDIIMFGSPEQSVEGMKVVCHELAQASNDPEESAIDEL 1505

Query: 183  IKDADKLVLCLAIKVPKTFDFILTGGSSRSCKYVLNTLMQTFQNKKLAHGVK 338
            +KDAD LV CLA KV KTFD  L G SSRSCKYVLNTLMQTFQNKKLAH VK
Sbjct: 1506 VKDADGLVSCLANKVAKTFDVSLMGASSRSCKYVLNTLMQTFQNKKLAHAVK 1557


>ref|XP_004162854.1| PREDICTED: LOW QUALITY PROTEIN: protein MOR1-like [Cucumis sativus]
          Length = 1289

 Score =  162 bits (409), Expect = 3e-38
 Identities = 75/112 (66%), Positives = 94/112 (83%)
 Frame = +3

Query: 3    LSRENIGNSVASPNASTDWNAALDMISFGSPEQSVEGIKVVCHELAQATDDPENTAIENL 182
            + R+++   + + N  TDWN A+D+ISFGSPEQSVEG+KVVCHELAQA+ DPE ++++ L
Sbjct: 723  MERQSVPQPLTTANGPTDWNEAMDIISFGSPEQSVEGMKVVCHELAQASSDPEGSSMDEL 782

Query: 183  IKDADKLVLCLAIKVPKTFDFILTGGSSRSCKYVLNTLMQTFQNKKLAHGVK 338
             +DAD+LVLCLA KV KTFD+ LTG SSRSCKYVLNTLMQTFQNK+LA+ VK
Sbjct: 783  ARDADRLVLCLATKVAKTFDYSLTGASSRSCKYVLNTLMQTFQNKRLAYAVK 834


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