BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006529
         (2087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplas...   725   0.0  
emb|CBI21621.3| unnamed protein product [Vitis vinifera]              723   0.0  
ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|2...   711   0.0  
ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus commun...   704   0.0  
ref|XP_003525138.1| PREDICTED: NADH dehydrogenase C1, chloroplas...   690   0.0  

>ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 543

 Score =  725 bits (1872), Expect = 0.0
 Identities = 363/467 (77%), Positives = 410/467 (87%), Gaps = 1/467 (0%)
 Frame = +2

Query: 329  YAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLVDQSDRFVFKPLLYELLS 508
            Y W DK++PRVCILGGGFGGLYTALRLESLVW +DKKPQVLLVDQS+RFVFKP+LYELL+
Sbjct: 78   YTWPDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLVDQSERFVFKPMLYELLT 137

Query: 509  GEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKIGSTRLSCGGRVQLESGLCIE 688
            GEVDAWEIAPRF DLLANT VQF QDRVK+L PSDHLG  G T  SCGG V LESGL IE
Sbjct: 138  GEVDAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMNGPTVSSCGGTVHLESGLVIE 197

Query: 689  YDWLVLALGAEPKLDLVPGAAEFALPFSSLEDAFKVNTKLRTLEREKFGKDLSPIRVAVV 868
            YDWLVLALGAE KLD+VPGAAEFALPFS+LEDA +V+ +LRTLER++FG+D  PIRVAVV
Sbjct: 198  YDWLVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRLRTLERKRFGRDF-PIRVAVV 256

Query: 869  GCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREAAAKVLSSRNVQLFLGYF 1048
            GCGYSGVELAATVSERLQ +G VQAINV TTI P APPGNREAA KVLSSRNV+L LG+F
Sbjct: 257  GCGYSGVELAATVSERLQDKGIVQAINVETTICPTAPPGNREAALKVLSSRNVELLLGFF 316

Query: 1049 VSCIRKSGKYEDSKLSVFERNN-DIVSEQAHTELVLELQPAERGLKSQILESDLVLWTVG 1225
            V CIRK+   E S+         D  +E    +L+LELQPAERGL+SQILE+DL+LWTVG
Sbjct: 317  VRCIRKASISEVSEKQTESGTLLDAAAEHEPEKLILELQPAERGLQSQILEADLILWTVG 376

Query: 1226 SKPLVPKVEFGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIGDSAALRDSAGRILPATA 1405
            SKP +P++E  + PH LP+N RGQAETDETLRVKGHPR+FA+GDS++LRDS G++LPATA
Sbjct: 377  SKPQLPQLEPCEWPHELPLNARGQAETDETLRVKGHPRIFAVGDSSSLRDSKGKLLPATA 436

Query: 1406 QVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAITPSFIEGLTLDGPIGH 1585
            QVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAI+PSFIEGLTL+GPIGH
Sbjct: 437  QVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAISPSFIEGLTLEGPIGH 496

Query: 1586 TARKIAYLIRLPTDEHKVKVGLSWLTKSAVDSIASFQSNVTKVLSGS 1726
             ARK+AYLIRLPTDEH++KVG+SWLTKSA+DS+A+ QS+V KVLSGS
Sbjct: 497  AARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVAAVQSSVIKVLSGS 543


>emb|CBI21621.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  723 bits (1866), Expect = 0.0
 Identities = 361/466 (77%), Positives = 407/466 (87%)
 Frame = +2

Query: 329  YAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLVDQSDRFVFKPLLYELLS 508
            Y W DK++PRVCILGGGFGGLYTALRLESLVW +DKKPQVLLVDQS+RFVFKP+LYELL+
Sbjct: 78   YTWPDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLVDQSERFVFKPMLYELLT 137

Query: 509  GEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKIGSTRLSCGGRVQLESGLCIE 688
            GEVDAWEIAPRF DLLANT VQF QDRVK+L PSDHLG  G T  SCGG V LESGL IE
Sbjct: 138  GEVDAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMNGPTVSSCGGTVHLESGLVIE 197

Query: 689  YDWLVLALGAEPKLDLVPGAAEFALPFSSLEDAFKVNTKLRTLEREKFGKDLSPIRVAVV 868
            YDWLVLALGAE KLD+VPGAAEFALPFS+LEDA +V+ +LRTLER++FG+D  PIRVAVV
Sbjct: 198  YDWLVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRLRTLERKRFGRDF-PIRVAVV 256

Query: 869  GCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREAAAKVLSSRNVQLFLGYF 1048
            GCGYSGVELAATVSERLQ +G VQAINV TTI P APPGNREAA KVLSSRNV+L LG+F
Sbjct: 257  GCGYSGVELAATVSERLQDKGIVQAINVETTICPTAPPGNREAALKVLSSRNVELLLGFF 316

Query: 1049 VSCIRKSGKYEDSKLSVFERNNDIVSEQAHTELVLELQPAERGLKSQILESDLVLWTVGS 1228
            V CIRK+                 +SE    +L+LELQPAERGL+SQILE+DL+LWTVGS
Sbjct: 317  VRCIRKAS----------------ISEHEPEKLILELQPAERGLQSQILEADLILWTVGS 360

Query: 1229 KPLVPKVEFGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQ 1408
            KP +P++E  + PH LP+N RGQAETDETLRVKGHPR+FA+GDS++LRDS G++LPATAQ
Sbjct: 361  KPQLPQLEPCEWPHELPLNARGQAETDETLRVKGHPRIFAVGDSSSLRDSKGKLLPATAQ 420

Query: 1409 VAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAITPSFIEGLTLDGPIGHT 1588
            VAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAI+PSFIEGLTL+GPIGH 
Sbjct: 421  VAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAISPSFIEGLTLEGPIGHA 480

Query: 1589 ARKIAYLIRLPTDEHKVKVGLSWLTKSAVDSIASFQSNVTKVLSGS 1726
            ARK+AYLIRLPTDEH++KVG+SWLTKSA+DS+A+ QS+V KVLSGS
Sbjct: 481  ARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVAAVQSSVIKVLSGS 526


>ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|222852852|gb|EEE90399.1|
            predicted protein [Populus trichocarpa]
          Length = 553

 Score =  711 bits (1834), Expect = 0.0
 Identities = 360/470 (76%), Positives = 400/470 (85%)
 Frame = +2

Query: 317  PLPLYAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLVDQSDRFVFKPLLY 496
            P  +Y W D ++P+VCILGGGFGGLYTALRLESL+W DDKKPQVLLVDQS+RFVFKPLLY
Sbjct: 100  PQRIYTWPDNKKPKVCILGGGFGGLYTALRLESLIWADDKKPQVLLVDQSERFVFKPLLY 159

Query: 497  ELLSGEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKIGSTRLSCGGRVQLESG 676
            ELLSGEVDAWEIAPRF +LLANT +QF++DRVK+L P+DHLG  GST    GG V LESG
Sbjct: 160  ELLSGEVDAWEIAPRFSELLANTGIQFLRDRVKMLHPADHLGMNGSTGSCSGGTVVLESG 219

Query: 677  LCIEYDWLVLALGAEPKLDLVPGAAEFALPFSSLEDAFKVNTKLRTLEREKFGKDLSPIR 856
            L IEYDWLVL+LGA  KLD VPGAAEFA PFS+LEDA KV+ KL+ LER KFGKD S IR
Sbjct: 220  LLIEYDWLVLSLGAGAKLDTVPGAAEFAFPFSTLEDACKVDNKLKELERRKFGKD-SLIR 278

Query: 857  VAVVGCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREAAAKVLSSRNVQLF 1036
            VAVVGCGYSGVELAATVSERLQ RG VQAINV+TTILP APPGNREAA KVLSSR VQL 
Sbjct: 279  VAVVGCGYSGVELAATVSERLQDRGLVQAINVNTTILPTAPPGNREAALKVLSSRKVQLL 338

Query: 1037 LGYFVSCIRKSGKYEDSKLSVFERNNDIVSEQAHTELVLELQPAERGLKSQILESDLVLW 1216
            LGYFV CIRK    E               E    + +LELQPAERGL+SQILE+DLVLW
Sbjct: 339  LGYFVRCIRKESDLE---------------EHGSEKYILELQPAERGLQSQILEADLVLW 383

Query: 1217 TVGSKPLVPKVEFGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIGDSAALRDSAGRILP 1396
            TVGS+P +P++E  D+ H LP+NGRGQAETDETLRVKGHPR+FA+GDS+ALRD  GRILP
Sbjct: 384  TVGSQPPLPQLEPYDKTHELPLNGRGQAETDETLRVKGHPRIFALGDSSALRDMNGRILP 443

Query: 1397 ATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAITPSFIEGLTLDGP 1576
            ATAQVAFQQADF GWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAA++PSFIEGLTL+GP
Sbjct: 444  ATAQVAFQQADFTGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAALSPSFIEGLTLEGP 503

Query: 1577 IGHTARKIAYLIRLPTDEHKVKVGLSWLTKSAVDSIASFQSNVTKVLSGS 1726
            +GH ARKIAYLIRLPTDEH++KVG+SWLTKSAVDS+AS QS ++KVLSGS
Sbjct: 504  VGHAARKIAYLIRLPTDEHRLKVGISWLTKSAVDSVASIQSTLSKVLSGS 553


>ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus communis]
            gi|223532582|gb|EEF34369.1| NADH dehydrogenase, putative
            [Ricinus communis]
          Length = 536

 Score =  704 bits (1818), Expect = 0.0
 Identities = 353/467 (75%), Positives = 401/467 (85%), Gaps = 1/467 (0%)
 Frame = +2

Query: 326  LYAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLVDQSDRFVFKPLLYELL 505
            +Y W D ++PRVCILGGGFGGLYTALRLESLVW DDKKPQVLLVDQS  FVFKP+LYELL
Sbjct: 70   IYTWPDNKKPRVCILGGGFGGLYTALRLESLVWADDKKPQVLLVDQSAHFVFKPMLYELL 129

Query: 506  SGEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKIGSTRLSCGGRVQLESGLCI 685
            SGEVDAWEIAPRF DLLANT V F+QD+VK+LQPSDHLGK GS+  SCGG V L SGL I
Sbjct: 130  SGEVDAWEIAPRFSDLLANTGVLFLQDKVKLLQPSDHLGKNGSSGSSCGGTVLLASGLLI 189

Query: 686  EYDWLVLALGAEPKLDLVPGAAEFALPFSSLEDAFKVNTKLRTLEREKFGKDLSPIRVAV 865
            EYDWLVLALGAE +LD+VPGAA+ A PFS+LEDA +VN KL  LER  FGKD S IRVAV
Sbjct: 190  EYDWLVLALGAEARLDVVPGAAKCAFPFSTLEDACRVNHKLNALERRNFGKD-SLIRVAV 248

Query: 866  VGCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREAAAKVLSSRNVQLFLGY 1045
            VGCGYSGVELAAT+SERL+ RG +QAIN+ T I P APPGNREAA +VLSSR VQL LGY
Sbjct: 249  VGCGYSGVELAATISERLKERGVIQAINIDTNICPAAPPGNREAALRVLSSRKVQLLLGY 308

Query: 1046 FVSCIRKSGKYEDSKLSV-FERNNDIVSEQAHTELVLELQPAERGLKSQILESDLVLWTV 1222
            FV CI+ +   E S +S   + + +I SE +  +  LELQPAERGL+SQILE+DLVLWTV
Sbjct: 309  FVRCIQIANDLETSAMSAEVDASENIASEHSSEKYFLELQPAERGLQSQILEADLVLWTV 368

Query: 1223 GSKPLVPKVEFGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIGDSAALRDSAGRILPAT 1402
            GSKPL+ ++E   +   LP+N RGQAETDETLRVKGHPR+FA+GDS+ALRDS+GR+LPAT
Sbjct: 369  GSKPLLSQLESDYQSRELPLNARGQAETDETLRVKGHPRIFALGDSSALRDSSGRLLPAT 428

Query: 1403 AQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAITPSFIEGLTLDGPIG 1582
            AQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAA++PSFIEGLTL+GPIG
Sbjct: 429  AQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAALSPSFIEGLTLEGPIG 488

Query: 1583 HTARKIAYLIRLPTDEHKVKVGLSWLTKSAVDSIASFQSNVTKVLSG 1723
            H ARK+AYLIRLPTDEH++KVG+SWLTKSA+DS+AS QS + KVLSG
Sbjct: 489  HAARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVASMQSTLAKVLSG 535


>ref|XP_003525138.1| PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 544

 Score =  690 bits (1780), Expect = 0.0
 Identities = 346/468 (73%), Positives = 397/468 (84%), Gaps = 2/468 (0%)
 Frame = +2

Query: 329  YAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLVDQSDRFVFKPLLYELLS 508
            +AW D ++PRVCILGGGFGGLYTALRLESL W DDKKPQ++LVDQS+RFVFKP+LYELLS
Sbjct: 80   FAWPDNKKPRVCILGGGFGGLYTALRLESLEWPDDKKPQIVLVDQSERFVFKPMLYELLS 139

Query: 509  GEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKIGSTRLSCGGRVQLESGLCIE 688
            GEVD WEIAPRF DLLANT+VQF +DRVK+L PSDH G  GS   SCGG V LESGL IE
Sbjct: 140  GEVDEWEIAPRFSDLLANTSVQFFKDRVKVLNPSDHWGMNGSKASSCGGTVHLESGLLIE 199

Query: 689  YDWLVLALGAEPKLDLVPGAAEFALPFSSLEDAFKVNTKLRTLEREKFGKDLSPIRVAVV 868
            YDWLVLALGAE KLD+VPGA EFA+PFS+LEDA KVN KL  LER+ FG D   I VAVV
Sbjct: 200  YDWLVLALGAEAKLDVVPGAIEFAIPFSTLEDARKVNDKLTKLERKTFGTDFQ-ISVAVV 258

Query: 869  GCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREAAAKVLSSRNVQLFLGYF 1048
            GCGYSGVELAAT++ERLQ+RG V+AINV T I P APPGNRE A KVLSSR V+L LGYF
Sbjct: 259  GCGYSGVELAATLAERLQNRGIVRAINVETMICPNAPPGNREVALKVLSSRKVELLLGYF 318

Query: 1049 VSCIRKSGKYEDSK--LSVFERNNDIVSEQAHTELVLELQPAERGLKSQILESDLVLWTV 1222
            V CIR+    E S     V E + ++V +    + +LELQPAERG++S+I+E+DLVLWTV
Sbjct: 319  VRCIRRLSDLESSDPLTGVDENSTEVVPD--FEKYILELQPAERGMQSKIIEADLVLWTV 376

Query: 1223 GSKPLVPKVEFGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIGDSAALRDSAGRILPAT 1402
            G+KP +P++E  D P ++P+N RGQAETDETLRVKGHPR+FA+GDS+ALRDS GRILPAT
Sbjct: 377  GTKPPLPQLEPSDEPFVIPLNARGQAETDETLRVKGHPRIFALGDSSALRDSNGRILPAT 436

Query: 1403 AQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAITPSFIEGLTLDGPIG 1582
            AQVAFQQADF GWNLWAAIN RPLLPFRFQNLGEMMTLGRNDAAI+PSFI+GLTL+G IG
Sbjct: 437  AQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFIDGLTLEGSIG 496

Query: 1583 HTARKIAYLIRLPTDEHKVKVGLSWLTKSAVDSIASFQSNVTKVLSGS 1726
            HTARKIAYLIRLPTDEH++KVG+SWLTKSA+DS++S QS + KVLSGS
Sbjct: 497  HTARKIAYLIRLPTDEHRLKVGISWLTKSAIDSVSSLQSTLYKVLSGS 544