BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006523
         (2686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   442   e-121
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi...   433   e-118
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   428   e-117
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   426   e-116
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   424   e-116

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  442 bits (1137), Expect = e-121
 Identities = 257/796 (32%), Positives = 407/796 (51%), Gaps = 11/796 (1%)
 Frame = +2

Query: 2    LTNVSYKIIAKIIVKRMRPILQRIIGPQQSAFLQGRSIHDNALLAHEAFHVIKNR-ANVN 178
            L  V YKI++K +  R++ IL  II P QSAF+  R I DNAL+A E FH +K + AN N
Sbjct: 512  LCTVLYKILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVAFEIFHAMKRKDANKN 571

Query: 179  AKRFALKLDMHKAYDKIEWPFLEEVLTRFGFGENWIRKVMFCVKSPTFSILLNGSTFGFF 358
                ALKLDM KAYD++EW FLE V+ + GF + WI +VM C+ S +F+  +NG   G  
Sbjct: 572  GV-CALKLDMSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFNVNGVVEGSL 630

Query: 359  SPTRGLRQGDPMSPFLFVLCAEVLSLNLNKLQLQGLVHGIKLSRNNSPITHLMYADDTII 538
            SP+RGLRQGDP+SP+LF+LCA+  S  L+K   +  +HG ++ R    ++HL +ADD+I+
Sbjct: 631  SPSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSIL 690

Query: 539  FGKGSVQEADEISRCLDRYCEASGQSINKTKSQFLHHKGLPGTEIRIFHRIFGTPCTHNF 718
            F K SVQE   ++  + +Y  ASGQ +N +K++ +  + +          + G       
Sbjct: 691  FTKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQ 750

Query: 719  PTYLGIPPVFNGKNKRSHFLPLIQKFNNRLASWKASLLSKGGRLTLINSVLSALPTHIMA 898
              YLG+P +  G++K+  F  + ++   +L  WK  LLS+ G+  LI SV  A+PT++M+
Sbjct: 751  EKYLGLPTII-GRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMS 809

Query: 899  CIQIPMNIIEDMDKIRRNFLWAHEPGERKMHYFGWDLACTPIQFGGLGIKDLQMQNLALL 1078
               +P  +I+++  +   F W      RKMH+  WD  C P   GGLG +DL   N +LL
Sbjct: 810  VFSLPSGLIDEIHSLLARFWWGSSDTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFNQSLL 869

Query: 1079 GKKAWELC-NPRSLWATQMKDKYFKNQHFMHAHLSTGASRTWRSMYYLRNMLVIGRRWKV 1255
             K+AW LC   ++L    ++ +YFK+   + A      S TWRS++  +++L+ G +W V
Sbjct: 870  AKQAWRLCTGDQTLLYRLLQARYFKSSELLEARRGYNPSFTWRSIWGSKSLLLEGLKWCV 929

Query: 1256 GDGISIRAWRDNWIPGTPIKMPLMSKPNGCFMERVCDFIDPVQRQWNTSLIREFWPDEYA 1435
            G G  IR W D WI G    M    + +     +VCD ID  +  WN   +++ + +E  
Sbjct: 930  GSGERIRVWEDAWILGEGAHMVPTPQADSNLDLKVCDLIDVARGAWNIESVQQTFVEEEW 989

Query: 1436 KRIISIPLTITAKEDSTFWWPNKYGRYDVKSAY------NMMQNYCDPNKEKVPIFSKIW 1597
            + ++SIPL+    +D  +WWP++ G + V+S Y       +        + +  ++ ++W
Sbjct: 990  ELVLSIPLSRFLPDDHRYWWPSRNGIFSVRSCYWLGRLGPVRTWQLQHGERETELWRRVW 1049

Query: 1598 KLNLPQKVRFFLWQLTHQMIPTADFLSHRGFQVEARXXXXXXXXXXXKHLFFQCPFARAV 1777
            +L  P K+  FLW+     +     L  R   V+A             H  F C FARA+
Sbjct: 1050 QLQGPPKLSHFLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFARAI 1109

Query: 1778 WLGLGLSVSIAHFDFNQMSEGLIHMMKCLGSADGSRTWITTLGAGLWYIWLARNGKKF-T 1954
            W   G +  + +   +  SE L  + K       ++    T+ + +W  W  RN   F  
Sbjct: 1110 WQVSGFASLMMNAPLSSFSERLEWLAK-----HATKEEFRTMCSFMWAGWFCRNKLIFEN 1164

Query: 1955 DTKQFPLASVIKAKRMVVTMEQINGENKPNDHNLMEIRVKWDCPPRGWFKLNTDGSSHGN 2134
            +    PL +  +  ++V    +  G               W  PP G FK+N D     N
Sbjct: 1165 ELSDAPLVAK-RFSKLVADYCEYAGSVFRGSGGGCGSSALWSPPPTGMFKVNFDAHLSPN 1223

Query: 2135 PGAAGAGCVLRGDNGNF-ILAIAVPIAFESAFMAETVALRMGIKAVKELNLANVVVETDC 2311
             G  G G V+R ++G   +L +    A  +A MAE +A    ++    L    +V+E D 
Sbjct: 1224 -GEVGLGVVIRANDGGIKMLGVKRVAARWTAVMAEAMAALFAVEVAHRLGFGRIVLEGDA 1282

Query: 2312 RLLHQIVTNK-DSLAP 2356
             ++   V +K + +AP
Sbjct: 1283 MMVINAVKHKCEGVAP 1298


>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
          Length = 1300

 Score =  433 bits (1113), Expect = e-118
 Identities = 271/844 (32%), Positives = 427/844 (50%), Gaps = 38/844 (4%)
 Frame = +2

Query: 2    LTNVSYKIIAKIIVKRMRPILQRIIGPQQSAFLQGRSIHDNALLAHEAFHVIKNRANVNA 181
            L NV YK+++K +V RMRPIL  ++ P QSAF+ GR I DNALLA E FH I+   + N 
Sbjct: 431  LCNVLYKVVSKCLVNRMRPILDEVVSPNQSAFVPGRLITDNALLAFECFHFIQKNRSPNN 490

Query: 182  KRFALKLDMHKAYDKIEWPFLEEVLTRFGFGENWIRKVMFCVKSPTFSILLNGSTFGFFS 361
               A KLD+ KAYD+++W FLE+ + + GF   W+  +M C+ +  ++I  NG+    F+
Sbjct: 491  AACAYKLDLSKAYDRVDWRFLEQAMYKMGFAHRWVSWIMSCITTVRYAIKFNGTLLSTFA 550

Query: 362  PTRGLRQGDPMSPFLFVLCAEVLSLNLNKLQLQGLVHGIKLSRNNSPITHLMYADDTIIF 541
            PTRGLRQGDP+SPFLF+  A+ LSL L +   QG +  +++ R    I+HL++ADDT++F
Sbjct: 551  PTRGLRQGDPLSPFLFLFVADGLSLLLEEKVNQGAISPVRICRRAPGISHLLFADDTLLF 610

Query: 542  GKGSVQEADEISRCLDRYCEASGQSINKTKSQFLHHKGLPGTE-------IRIFHRIFGT 700
             K + ++A+ I+  L  Y  ++GQ +N +K   +  +  P +E       ++I + +F  
Sbjct: 611  LKSNKEQAEIINSVLGDYAASTGQLVNPSKCSIMFGEATPLSEQTDIKATLQITNNVFE- 669

Query: 701  PCTHNFPTYLGIPPVFNGKNKRSHFLPLIQKFNNRLASWKASLLSKGGRLTLINSVLSAL 880
                    YLG P   +G+  +  F  L ++   R+  W  + LS GG+  LI SV+ AL
Sbjct: 670  ------DKYLGFPTP-DGRMHKGKFQSLHERVWKRIIQWGENFLSSGGKEVLIKSVMQAL 722

Query: 881  PTHIMACIQIPMNIIEDMDKIRRNFLWAHEPGERKMHYFGWDLACTPIQFGGLGIKDLQM 1060
            P ++M   ++P ++ ED+ K  RNF W    G+R+ H+  WD    P Q GG+G +D ++
Sbjct: 723  PVYVMGIFKLPDSVCEDLSKAVRNFWWGAGDGKRRTHWRAWDSLTKPKQCGGMGFRDFRL 782

Query: 1061 QNLALLGKKAWELCN-PRSLWATQMKDKYFKNQHFMHAHLSTGASRTWRSMYYLRNMLVI 1237
             N ALL +++W +   P SL A  +K KYF N   +    S  AS  WR + Y   +L  
Sbjct: 783  FNQALLARQSWRILEFPESLCARVLKAKYFPNGSLIDTSFSGNASPGWRGIEYGLELLKQ 842

Query: 1238 GRRWKVGDGISIRAWRDNWIPGTPIKMPLMSKPNGCFMERVCDFIDPVQRQWNTSLIREF 1417
            G  W+VG+G +IR WRD WIP    + P+  K     ++ V + +D    +W++  I++ 
Sbjct: 843  GIIWRVGNGRTIRIWRDPWIPRDFSRRPITHKGTS-RVKWVSELLDQ-NGEWDSHKIQQI 900

Query: 1418 WPDEYAKRIISIPLTITAKEDSTFWWPNKYGRYDVKSAY-------NMMQNYCDPNKEKV 1576
            +     ++I+SI  +   + D   W  +K GR+ V+SAY       N++ +     +E  
Sbjct: 901  FLPIDVEKILSIHTSRFHENDFVAWHSDKLGRFSVRSAYHLALSLSNVVASSSSSGQELS 960

Query: 1577 PIFSKIWKLNLPQKVRFFLWQLTHQMIPTADFLSHRGFQVEARXXXXXXXXXXXKHLFFQ 1756
              ++++W  ++PQKVR F+W+     + T      +  +  +             H   +
Sbjct: 961  KAWNQLWSCHVPQKVRIFIWRAASNSLATMVNKKKKRLEHCSMCSICGTEEEDVAHALCR 1020

Query: 1757 CPFARAVWLGLGLSVSI-AHFDFNQMSEGLIHMMKCLGSADGSRTWITTLGAGLWYIWLA 1933
            CP A+ +W  +  + +I    D N      I  +    S   S+    TL   LW IW  
Sbjct: 1021 CPHAKYLWEVMRRAKAITVQADRNWTGADWIFDI----SERISKEERPTLLMMLWRIWYV 1076

Query: 1934 RN----GK-----------------KFTDTKQFPLASVIKAKRMVVTMEQINGENKPNDH 2050
            RN    GK                    + +QFP A++ K K ++         N P   
Sbjct: 1077 RNEITHGKAAVPAEVSQRFISSYITSLLEIRQFPDANLCKGKHVIRCAAAGAQVNHP--- 1133

Query: 2051 NLMEIRVKWDCPPRGWFKLNTDGSSHGNPGAAGAGCVLRGDNGNFILAIAVPIAFE-SAF 2227
             +  + V+W  P  GW KLN DGS     G+ G G VLR   G  I A    +    SA 
Sbjct: 1134 RVNSVPVRWVRPQAGWMKLNVDGSYDPRDGSGGIGAVLRNSEGKLIFAACGSMCRPVSAL 1193

Query: 2228 MAETVALRMGIKAVKELNLANVVVETDCRLLHQIVTNKDSLAPAEVQELIMEIRDWMKDG 2407
             AE VA + GI    +     ++VETDC  L ++V  +  +  +++  LI EI+D +K  
Sbjct: 1194 EAELVACKEGIILALQWTFLPIIVETDCLELVKLVAEQGKVM-SDLGFLIREIKDLVKGN 1252

Query: 2408 NFIM 2419
              I+
Sbjct: 1253 REIV 1256


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  428 bits (1101), Expect = e-117
 Identities = 259/823 (31%), Positives = 410/823 (49%), Gaps = 23/823 (2%)
 Frame = +2

Query: 2    LTNVSYKIIAKIIVKRMRPILQRIIGPQQSAFLQGRSIHDNALLAHEAFHVIKNRANVNA 181
            L NV YK+I K++  R++ IL  +I   Q+AF++GR I DN L+AHE  H + +    + 
Sbjct: 509  LCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELLHALSSNNKCSE 568

Query: 182  KRFALKLDMHKAYDKIEWPFLEEVLTRFGFGENWIRKVMFCVKSPTFSILLNGSTFGFFS 361
            +  A+K D+ KAYD++EWPFLE+ +   GF ++WIR +M CVKS  + +L+NG+  G   
Sbjct: 569  EFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEII 628

Query: 362  PTRGLRQGDPMSPFLFVLCAEVLSLNLNKLQLQGLVHGIKLSRNNSPITHLMYADDTIIF 541
            P+RGLRQGDP+SP+LFV+C E+L   L   + +  + G+K++R   PI+HL++ADD++ +
Sbjct: 629  PSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFY 688

Query: 542  GKGSVQEADEISRCLDRYCEASGQSINKTKSQFLHHKGLPGTEIRIFHRIFGTPCTHNFP 721
             K + +   +I R ++ Y  ASGQ +N  KS     K +      +  R  G        
Sbjct: 689  CKVNDEALGQIIRIIEEYSLASGQRVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEG 748

Query: 722  TYLGIPPVFNGKNKRSHFLPLIQKFNNRLASWKASLLSKGGRLTLINSVLSALPTHIMAC 901
             YLG+P  F G +K +    L  +   ++  W+++ LS GG+  L+ +V  ALPT+ M+C
Sbjct: 749  VYLGLPESFQG-SKVATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSC 807

Query: 902  IQIPMNIIEDMDKIRRNFLWAHEPGERKMHYFGWDLACTPIQFGGLGIKDLQMQNLALLG 1081
             +IP  I + ++ +   F W ++   R +H+  W     P   GGLG K+++  N+ALLG
Sbjct: 808  FKIPKTICQQIESVMAEFWWKNKKEGRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLG 867

Query: 1082 KKAWELCNPR-SLWATQMKDKYFKNQHFMHAHLSTGASRTWRSMYYLRNMLVIGRRWKVG 1258
            K+ W +   + SL A   K +YF     ++A L +  S  W+S+Y  + ++  G R  +G
Sbjct: 868  KQLWRMITEKDSLMAKVFKSRYFSKSDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIG 927

Query: 1259 DGISIRAWRDNWIPGTPIKMP-------LMSKPNGCFMERVCDFIDPVQRQWNTSLIREF 1417
            +G +I  W D WI   P K         L+S+     +  V D + P  R WN +L+   
Sbjct: 928  NGETINVWTDPWIGAKPAKAAQAVKRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLL 987

Query: 1418 WPDEYAKRIISIPLTITAKEDSTFWWPNKYGRYDVKSAYNMMQNYCDP--NKEKV----- 1576
            +PD   + I+++        D   W  ++ G Y VKS Y +M    +   N ++V     
Sbjct: 988  FPDNTQENILALRPGGKETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSL 1047

Query: 1577 -PIFSKIWKLNLPQKVRFFLWQLTHQMIPTADFLSHRGFQVEARXXXXXXXXXXXKHLFF 1753
             PIF +IWKL++P K+  FLW+  +  +  A  L++R    E              HL F
Sbjct: 1048 DPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLF 1107

Query: 1754 QCPFARAVWLGLGLSVSIAHFDFNQMSEGLIHMMKCLGSADGSRTWITTLGAGLWYIWLA 1933
            +CPFAR  W    L           +   + H++    S          +   LW +W  
Sbjct: 1108 KCPFARLTWAISPLPAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKN 1167

Query: 1934 RNGKKFTDTKQFPLASVIKAKRMVVTMEQINGENKPNDHNLMEIR---VKWDCPPRGWFK 2104
            RN   F   ++F    VI   +    M+  N   +P        R   VKW  P  GW K
Sbjct: 1168 RNDLVFKG-REFTAPQVI--LKATEDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHGWVK 1224

Query: 2105 LNTDGSSHGNPGAAGAGCVLRGDNGNFI-LAIAVPIAFESAFMAETVALRMGIKAVKELN 2281
             NTDG+   + G  G G VLR   G  + L +    + +S    E  ALR  + ++   N
Sbjct: 1225 CNTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLSRFN 1284

Query: 2282 LANVVVETDCRLLHQIVTNK---DSLAPAEVQELIMEIRDWMK 2401
               V+ E+D + L  ++ N+    SLAP      I +IR+ ++
Sbjct: 1285 YRRVIFESDSQYLVSLIQNEMDIPSLAPR-----IQDIRNLLR 1322


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  426 bits (1095), Expect = e-116
 Identities = 259/785 (32%), Positives = 401/785 (51%), Gaps = 5/785 (0%)
 Frame = +2

Query: 2    LTNVSYKIIAKIIVKRMRPILQRIIGPQQSAFLQGRSIHDNALLAHEAFHVIKNRANVNA 181
            L NV YK+++K +V R++  L R++   QSAF+ GR I DNAL+A E FH +K+R     
Sbjct: 513  LCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNALIAMEVFHSMKHRNRSRK 572

Query: 182  KRFALKLDMHKAYDKIEWPFLEEVLTRFGFGENWIRKVMFCVKSPTFSILLNGSTFGFFS 361
               A+KLDM KAYD++EW FL ++L   GF   W+  +M CV S ++S ++NG   G  +
Sbjct: 573  GTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSYSFIINGGVCGSVT 632

Query: 362  PTRGLRQGDPMSPFLFVLCAEVLSLNLNKLQLQGLVHGIKLSRNNSPITHLMYADDTIIF 541
            P RGLR GDP+SP+LF+L A+  S  + K   +  +HG K SR+   I+HL +AD +++F
Sbjct: 633  PARGLRHGDPLSPYLFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLF 692

Query: 542  GKGSVQEADEISRCLDRYCEASGQSINKTKSQFLHHKGLPGTEIRIFHRIFGTPCTHNFP 721
             + S QE   I   L+ Y +ASGQ IN  KS+    KG+   +      I          
Sbjct: 693  TRASRQECAIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHM 752

Query: 722  TYLGIPPVFNGKNKRSHFLPLIQKFNNRLASWKASLLSKGGRLTLINSVLSALPTHIMAC 901
             YLGIP +  G+++ + F  L+ +   +L  WK  LLS+ G+  L+ SV+ A+PT++M  
Sbjct: 753  KYLGIPSI-TGRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGV 811

Query: 902  IQIPMNIIEDMDKIRRNFLWAHEPGERKMHYFGWDLACTPIQFGGLGIKDLQMQNLALLG 1081
             ++P +II+ +      F W     +R++H+  WD  CT   FGG+G +DL++ N ALLG
Sbjct: 812  YKLPCSIIQKIHSAMARFWWGSSDTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFNDALLG 871

Query: 1082 KKAWELC-NPRSLWATQMKDKYFKNQHFMHAHLSTGASRTWRSMYYLRNMLVIGRRWKVG 1258
            ++AW L   P SL A  MK KY+ N  F+ A L    S +WRS++  + +L  G  W++G
Sbjct: 872  RQAWRLVREPHSLLARVMKAKYYSNHDFLDAPLGVSTSYSWRSIWSSKALLKEGMVWRIG 931

Query: 1259 DGISIRAWRDNWIPGTPIKMPLMSKPNGCFMERVCDFIDPVQRQWNTSLIREFWPDEYAK 1438
            +G ++R W D W+    +   + S+ +G  +  V + ID  + +W  SLI   + +   K
Sbjct: 932  NGTNVRIWEDPWVL-DELGRFITSEKHG-NLNMVSELIDFDRMEWKVSLIETVFNERDIK 989

Query: 1439 RIISIPLTITAKEDSTFWWPNKYGRYDVKSAYNMMQNYCDPNKEKVPIFSKIWKLNLPQK 1618
             I+SIPL+    +D   W   K   Y VK+AY + +     +  +  I   IW + +  K
Sbjct: 990  CILSIPLSSLPLKDELTWAFTKNAHYSVKTAYMLGKGGNLDSFHQAWI--DIWSMEVSPK 1047

Query: 1619 VRFFLWQLTHQMIPTADFLSHRGFQVEARXXXXXXXXXXXKHLFFQCPFARAVWLGLGLS 1798
            V+ FLW+L    +P    L HR    +              H  F CPF R +W+  G  
Sbjct: 1048 VKHFLWRLGTNTLPVRSLLKHRHMLDDDLCPRGCGEPESQFHAIFGCPFIRDLWVDSGCD 1107

Query: 1799 VSIAHFDFNQMSEGLIHMMKCLGSADGSRTWITTLGAGL-WYIWLARNGKKFTDTKQFPL 1975
               A      M+E L+       ++ G    + T GA + W +W  RN   F  +   P 
Sbjct: 1108 NFRALTTDTAMTEALV-------NSHGLDASVRTKGAFMAWVLWSERNSIVFNQSSTPPH 1160

Query: 1976 ASVIKAKRMVVTMEQINGENKPNDH--NLMEIRVKWDCPPRGWFKLNTDGSSHGNPGAAG 2149
              + +  R+V           PN +   +   RV W  PP    KLN D +S  + G  G
Sbjct: 1161 ILLARVSRLVEEHGTYTARIYPNRNCCAIPSARV-WAAPPPEVIKLNVD-ASLASAGWVG 1218

Query: 2150 AGCVLRGDNGNFILAIAVPIAFE-SAFMAETVALRMGIKAVKELNLANVVVETDCRLLHQ 2326
               + R  +G  + A    +  + SA +AE  A+ M ++  +    A ++VE+DC    Q
Sbjct: 1219 LSVIARDSHGTVLFAAVRKVRAQWSAEIAEAKAIEMALRLGRRYGFAAIIVESDC----Q 1274

Query: 2327 IVTNK 2341
            +V N+
Sbjct: 1275 VVVNR 1279


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  424 bits (1089), Expect = e-116
 Identities = 262/812 (32%), Positives = 410/812 (50%), Gaps = 16/812 (1%)
 Frame = +2

Query: 2    LTNVSYKIIAKIIVKRMRPILQRIIGPQQSAFLQGRSIHDNALLAHEAFHVIKNRANVNA 181
            L NV YK+++K++  R++ IL  +I P QSAF+ GR I DN L+A E  H ++N+ +   
Sbjct: 765  LCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQV 824

Query: 182  KRFALKLDMHKAYDKIEWPFLEEVLTRFGFGENWIRKVMFCVKSPTFSILLNGSTFGFFS 361
               A KLDM KAYD++EW FL +++ + GF  +W+  +M CV + T+ I +NG     FS
Sbjct: 825  GYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFS 884

Query: 362  PTRGLRQGDPMSPFLFVLCAEVLSLNLNKLQLQGLVHGIKLSRNNSPITHLMYADDTIIF 541
            P RGLRQGDP+SP+LF+LCAE  S  L+K + +G +HGI++ +    ++HL++ADD++I 
Sbjct: 885  PGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLIL 944

Query: 542  GKGSVQEADEISRCLDRYCEASGQSINKTKSQFLHHKGLPGTEIRIFHRIFGTPCTHNFP 721
             + +  EA ++   L  Y E SGQ INK KS  +        E R               
Sbjct: 945  CRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNE 1004

Query: 722  TYLGIPPVFNGKNKRSHFLPLIQKFNNRLASWKASLLSKGGRLTLINSVLSALPTHIMAC 901
             YLG+ PVF G+++   F  L ++   R+  WK  LLS+ G+  LI +V  A+PT  M C
Sbjct: 1005 RYLGL-PVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGC 1063

Query: 902  IQIPMNIIEDMDKIRRNFLWAHEPGERKMHYFGWDLACTPIQFGGLGIKDLQMQNLALLG 1081
             ++  ++ + + K+   + W+++  + KMH+  W+    P   GGLG +D+ + NLA+L 
Sbjct: 1064 FELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLA 1123

Query: 1082 KKAWELC-NPRSLWATQMKDKYFKNQHFMHAHLSTGASRTWRSMYYLRNMLVIGRRWKVG 1258
            K+ W L  +P SL +  ++ KYF          ++  S TWRS+     +L  G  W+VG
Sbjct: 1124 KQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVG 1183

Query: 1259 DGISIRAWRDNWIPGTPIKMPLMSKPNGC-FMERVCDFIDPVQRQWNTSLIRE-FWPDEY 1432
            DG  I  W D WIP    + P+   P G   + +V + IDP    W+  L+ + FW ++ 
Sbjct: 1184 DGSKINIWADPWIPRGWSRKPM--TPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDV 1241

Query: 1433 AKRIISIPLTITAKEDSTFWWPNKYGRYDVKSAYNMM--------QNYCD--PNKEK--V 1576
            A  I SIP+ +   ED   W  +  G + VKSAY +         +N C    N E    
Sbjct: 1242 A-AIKSIPVHV-EMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDD 1299

Query: 1577 PIFSKIWKLNLPQKVRFFLWQLTHQMIPTADFLSHRGFQVEARXXXXXXXXXXXKHLFFQ 1756
              + K+WKL +P K++ FLW++ H  +     L HRG  V+ R            HLFF+
Sbjct: 1300 DFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFK 1359

Query: 1757 CPFARAVWLGLGLSVSIAHFDFNQMSEGLIHMMKCLGSADGSRTWITTLGAGLWYIWLAR 1936
            C   + VW  L L    +  +     + ++  + C    + +   +      LW  W  R
Sbjct: 1360 CKPVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPENERTSAIVC-----LWQWWKER 1414

Query: 1937 NGKKFTDTKQFPLASVIKAKRMVVTMEQINGENKPNDHNLMEIRVKWDCPPRGWFKLNTD 2116
            N  +     + P  + +    M    E +    K       E  V W  PP  + K+NTD
Sbjct: 1415 NEVREGGIPRSP--AELSHLIMSQAGEFVRMNVKEKSPRTGECAV-WRRPPLNFVKINTD 1471

Query: 2117 GSSHGNPGAAGAGCVLRGDNGNFILAIAVPIAF-ESAFMAETVALRMGIKAVKELNLANV 2293
            G+   N    G G V++   G  + A A P A+ + AF AE VA    IK   E  ++ +
Sbjct: 1472 GAYSSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRI 1531

Query: 2294 VVETDCRLLHQIVTNKDSLAPAEVQELIMEIR 2389
             +ETD  +L   + + +S   + +  +I+EI+
Sbjct: 1532 ELETDSMMLRYAIQD-NSFNLSSLGGVILEIK 1562