BLASTX nr result

ID: Coptis25_contig00006521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006521
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532015.1| ATP-binding cassette transporter, putative [...   348   6e-94
emb|CBI30263.3| unnamed protein product [Vitis vinifera]              344   1e-92
emb|CAN77838.1| hypothetical protein VITISV_025837 [Vitis vinifera]   344   2e-92
ref|XP_002326416.1| predicted protein [Populus trichocarpa] gi|2...   343   3e-92
emb|CBI40238.3| unnamed protein product [Vitis vinifera]              337   1e-90

>ref|XP_002532015.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223528327|gb|EEF30370.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1211

 Score =  348 bits (894), Expect = 6e-94
 Identities = 179/273 (65%), Positives = 206/273 (75%)
 Frame = -2

Query: 820  FFRQFLAFVSINQTALALFRFIAALGRTLVVANXXXXXXXXXXXXXXXFMISKDDLGPWM 641
            FF+QFLAF S++Q AL+LFRFIAA+GRT VVAN               F++++DD+ PWM
Sbjct: 441  FFKQFLAFFSVHQMALSLFRFIAAIGRTEVVANTLGTFTLLVVFVLGGFIVARDDIEPWM 500

Query: 640  IWGYYVSPMMYGQNAIAINEFLDERWSTPIVDPVTREPTVGKALLRSRGLFVEEYWYWIC 461
            IWGYY+SPMMYGQNAI INEFLDERWS P  DP   +PTVGK LL+ RG+F+EEYWYWI 
Sbjct: 501  IWGYYISPMMYGQNAIVINEFLDERWSAPNNDPTFSQPTVGKVLLKMRGMFLEEYWYWIS 560

Query: 460  IAALTGFSLLFNICFVMALTYLNPLGGSKSAILDEDAEDTKNSSSREDYRSVSAMASSTF 281
            +AAL GFSLLFNI FV ALTYL+PLG SKS IL++D    K SS+    RS    + ST 
Sbjct: 561  VAALVGFSLLFNILFVWALTYLDPLGDSKSIILEDDESKKKMSSTGHKTRSTEMTSLST- 619

Query: 280  EGIDMAVRKAPDIIVEQSIRKGMVLPFQPLSLAFNHVNYYVDMPAEMSSQGIDETRLQLL 101
                     AP       +++GMVLPFQPLSLAF+HVNYYVDMPAEM SQGI+E RLQLL
Sbjct: 620  ---------APLYEEHAPMKRGMVLPFQPLSLAFSHVNYYVDMPAEMKSQGIEEDRLQLL 670

Query: 100  RDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR 2
            RDVSGAFRPG+LTALVGVSGAGKTTLMDVLAGR
Sbjct: 671  RDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGR 703


>emb|CBI30263.3| unnamed protein product [Vitis vinifera]
          Length = 1357

 Score =  344 bits (883), Expect = 1e-92
 Identities = 176/275 (64%), Positives = 210/275 (76%), Gaps = 2/275 (0%)
 Frame = -2

Query: 820  FFRQFLAFVSINQTALALFRFIAALGRTLVVANXXXXXXXXXXXXXXXFMISKDDLGPWM 641
            FFRQFLAF  I+Q AL+LFRFIAA+GRT VVAN               F+ISK+D+ P+M
Sbjct: 552  FFRQFLAFFGIHQMALSLFRFIAAVGRTQVVANTLGTFTLLMVFVLGGFIISKNDIEPFM 611

Query: 640  IWGYYVSPMMYGQNAIAINEFLDERWSTPIVDPVTREPTVGKALLRSRGLFVEEYWYWIC 461
            IWGYY+SPMMYGQNAI +NEFLD+RW+ P  D    EPTVGK LL+SRG FV+EYW+WIC
Sbjct: 612  IWGYYISPMMYGQNAIVMNEFLDKRWAAPNTDSRFNEPTVGKVLLKSRGFFVDEYWFWIC 671

Query: 460  IAALTGFSLLFNICFVMALTYLNPLGGSKSAILDEDAEDTKNSSSREDYRSVSAMASSTF 281
            + AL  FSLLFN+ FV ALT+LNPLG +K+AIL+E+ +  KN +S   + +         
Sbjct: 672  VVALLAFSLLFNVLFVAALTFLNPLGDTKNAILNEEDDKNKNKASSGQHST--------- 722

Query: 280  EGIDMAVRKAPDII--VEQSIRKGMVLPFQPLSLAFNHVNYYVDMPAEMSSQGIDETRLQ 107
            EG DMAV  + +I+   E + ++GMVLPFQPLSLAF HVNY+VDMPAEM SQG++E RLQ
Sbjct: 723  EGTDMAVINSSEIVGSAENAPKRGMVLPFQPLSLAFEHVNYFVDMPAEMKSQGVEEDRLQ 782

Query: 106  LLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR 2
            LLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR
Sbjct: 783  LLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR 817


>emb|CAN77838.1| hypothetical protein VITISV_025837 [Vitis vinifera]
          Length = 1456

 Score =  344 bits (882), Expect = 2e-92
 Identities = 176/275 (64%), Positives = 210/275 (76%), Gaps = 2/275 (0%)
 Frame = -2

Query: 820  FFRQFLAFVSINQTALALFRFIAALGRTLVVANXXXXXXXXXXXXXXXFMISKDDLGPWM 641
            FFRQFLAF  I+Q AL+LFRFIAA+GRT VVAN               F+ISK+D+ P+M
Sbjct: 651  FFRQFLAFFGIHQMALSLFRFIAAVGRTQVVANTLGTFTLLMVFVLGGFIISKNDIEPFM 710

Query: 640  IWGYYVSPMMYGQNAIAINEFLDERWSTPIVDPVTREPTVGKALLRSRGLFVEEYWYWIC 461
            IWGYY+SPMMYGQNAI +NEFLD+RW+ P  D    EPTVGK LL+SRG FV+EYW+WIC
Sbjct: 711  IWGYYISPMMYGQNAIVMNEFLDKRWAAPNTDSRFNEPTVGKVLLKSRGFFVDEYWFWIC 770

Query: 460  IAALTGFSLLFNICFVMALTYLNPLGGSKSAILDEDAEDTKNSSSREDYRSVSAMASSTF 281
            + AL  FSLLFN+ FV ALT+LNPLG +K+AIL+E+ +  KN +S   + +         
Sbjct: 771  VXALLAFSLLFNVLFVAALTFLNPLGDTKNAILNEEDDKNKNKASSGQHST--------- 821

Query: 280  EGIDMAVRKAPDII--VEQSIRKGMVLPFQPLSLAFNHVNYYVDMPAEMSSQGIDETRLQ 107
            EG DMAV  + +I+   E + ++GMVLPFQPLSLAF HVNY+VDMPAEM SQG++E RLQ
Sbjct: 822  EGTDMAVINSSEIVGSAENAPKRGMVLPFQPLSLAFEHVNYFVDMPAEMKSQGVEEDRLQ 881

Query: 106  LLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR 2
            LLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR
Sbjct: 882  LLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR 916


>ref|XP_002326416.1| predicted protein [Populus trichocarpa] gi|222833609|gb|EEE72086.1|
            predicted protein [Populus trichocarpa]
          Length = 1463

 Score =  343 bits (879), Expect = 3e-92
 Identities = 177/275 (64%), Positives = 205/275 (74%), Gaps = 2/275 (0%)
 Frame = -2

Query: 820  FFRQFLAFVSINQTALALFRFIAALGRTLVVANXXXXXXXXXXXXXXXFMISKDDLGPWM 641
            FFRQFLAF  I+Q ALALFRFIAA+GRT VVAN               F+++KDD+ PWM
Sbjct: 658  FFRQFLAFFCIHQMALALFRFIAAVGRTQVVANTLGTFTLLLVFVLGGFIVAKDDIEPWM 717

Query: 640  IWGYYVSPMMYGQNAIAINEFLDERWSTPIVDPVTREPTVGKALLRSRGLFVEEYWYWIC 461
            IWGYY SPMMYGQNAI +NEFLDERWS    D      TVGK LL++RG F ++YW+WIC
Sbjct: 718  IWGYYSSPMMYGQNAIVMNEFLDERWSVNNTDSNFAGETVGKVLLKARGFFTDDYWFWIC 777

Query: 460  IAALTGFSLLFNICFVMALTYLNPLGGSKSAILDEDAEDTKNSSSREDYRSVSAMASSTF 281
            I AL GFSLLFN+ F++ALT+LNPLG SK+ ++D+DA+  K +SS               
Sbjct: 778  IGALFGFSLLFNVLFIVALTFLNPLGDSKAVVVDDDAKKNKKTSS----------GQQRA 827

Query: 280  EGIDMAVRKAPDI--IVEQSIRKGMVLPFQPLSLAFNHVNYYVDMPAEMSSQGIDETRLQ 107
            EGI MA R + +I   V+ S ++GMVLPFQPLSLAFNHV+YYVDMP EM SQGIDE RLQ
Sbjct: 828  EGIPMATRNSTEIGGAVDNSTKRGMVLPFQPLSLAFNHVSYYVDMPDEMKSQGIDEERLQ 887

Query: 106  LLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR 2
            LLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR
Sbjct: 888  LLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR 922


>emb|CBI40238.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score =  337 bits (865), Expect = 1e-90
 Identities = 175/286 (61%), Positives = 210/286 (73%), Gaps = 13/286 (4%)
 Frame = -2

Query: 820  FFRQFLAFVSINQTALALFRFIAALGRTLVVANXXXXXXXXXXXXXXXFMISKDDLGPWM 641
            FFRQ LAF  ++Q AL+LFRFIAALGRT +VAN               F+++KDD+ PWM
Sbjct: 632  FFRQLLAFFGVHQMALSLFRFIAALGRTQIVANTLGTFTLLLVFVLGGFIVAKDDIEPWM 691

Query: 640  IWGYYVSPMMYGQNAIAINEFLDERWSTPIVDPVTREPTVGKALLRSRGLFVEEYWYWIC 461
            IWGYY SPM YGQNA+ INEFLD+RWS P +D    EPTVGKALL++RG+FV+ YWYWIC
Sbjct: 692  IWGYYASPMTYGQNALVINEFLDDRWSAPNIDQRIPEPTVGKALLKARGMFVDGYWYWIC 751

Query: 460  IAALTGFSLLFNICFVMALTYLNPLGGSKSAILDEDAEDTKN----SSSREDYRSV--SA 299
            + AL GFSLLFNICF++ALTYL+PLG SKS I+DE+ E+       S+ + D  +   ++
Sbjct: 752  VGALMGFSLLFNICFIVALTYLDPLGDSKSVIIDEENEEKSEKQFFSNKQHDLTTPERNS 811

Query: 298  MASSTFEGIDMAVRKAPD---IIVEQS----IRKGMVLPFQPLSLAFNHVNYYVDMPAEM 140
              +   EGIDM VRK  +    +V+ +     ++GMVLPFQPLSLAF HVNYYVDMPA M
Sbjct: 812  ATAPMSEGIDMEVRKTRESTKSVVKDANHTPTKRGMVLPFQPLSLAFEHVNYYVDMPAGM 871

Query: 139  SSQGIDETRLQLLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGR 2
             SQGI+  RLQLLRD SGAFRPGI  ALVGVSGAGKTTLMDVLAGR
Sbjct: 872  KSQGIEADRLQLLRDASGAFRPGIQIALVGVSGAGKTTLMDVLAGR 917


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