BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006518
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29340.3| unnamed protein product [Vitis vinifera]              175   3e-42
ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi...   175   3e-42
ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|2...   157   9e-37
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   145   3e-33

>emb|CBI29340.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  175 bits (444), Expect = 3e-42
 Identities = 84/105 (80%), Positives = 92/105 (87%)
 Frame = -1

Query: 322 TFGNVEMAERASRALLEMGSNSDGDFVLLSNTYAAHERWDDVGRVREAMRSRDVKKVPGF 143
           T+GNVEMAE ASR L+EMGSNS GDFVLLSN YAA ERW+DVGRVREAM+SRDV+KVPGF
Sbjct: 318 TYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVREAMKSRDVRKVPGF 377

Query: 142 SFIEVEGAIHKFFNGDQSHPGWREIYRKLDEIGFRV*EYGYVPET 8
           S+IEVEG IHKF NGDQSHP WREIY KLDEI FR+  +GYV ET
Sbjct: 378 SYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIKAFGYVAET 422


>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Vitis vinifera]
          Length = 573

 Score =  175 bits (444), Expect = 3e-42
 Identities = 84/105 (80%), Positives = 92/105 (87%)
 Frame = -1

Query: 322 TFGNVEMAERASRALLEMGSNSDGDFVLLSNTYAAHERWDDVGRVREAMRSRDVKKVPGF 143
           T+GNVEMAE ASR L+EMGSNS GDFVLLSN YAA ERW+DVGRVREAM+SRDV+KVPGF
Sbjct: 382 TYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVREAMKSRDVRKVPGF 441

Query: 142 SFIEVEGAIHKFFNGDQSHPGWREIYRKLDEIGFRV*EYGYVPET 8
           S+IEVEG IHKF NGDQSHP WREIY KLDEI FR+  +GYV ET
Sbjct: 442 SYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIKAFGYVAET 486


>ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|222856179|gb|EEE93726.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  157 bits (397), Expect = 9e-37
 Identities = 77/107 (71%), Positives = 85/107 (79%)
 Frame = -1

Query: 322 TFGNVEMAERASRALLEMGSNSDGDFVLLSNTYAAHERWDDVGRVREAMRSRDVKKVPGF 143
           T  NVE+AE  SR L+EMGSN  GDFVLLSN YAA ERW DVGRVREAM++RDVKKVPG 
Sbjct: 387 THRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPGL 446

Query: 142 SFIEVEGAIHKFFNGDQSHPGWREIYRKLDEIGFRV*EYGYVPETCY 2
           S+IE  G IHKF+N D+SH  WREIY KLDEI FRV EYGYV ET +
Sbjct: 447 SYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETSF 493


>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/105 (68%), Positives = 84/105 (80%)
 Frame = -1

Query: 322 TFGNVEMAERASRALLEMGSNSDGDFVLLSNTYAAHERWDDVGRVREAMRSRDVKKVPGF 143
           T+G+VEMAE ASR L+EMG  S GDFVLLSN YAA +RWDDVGRVR+AMR RDVKK PGF
Sbjct: 385 TYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGF 444

Query: 142 SFIEVEGAIHKFFNGDQSHPGWREIYRKLDEIGFRV*EYGYVPET 8
           S+IE++G ++KF NGDQSH   REIY KLDEI  R+  YGY  +T
Sbjct: 445 SYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADT 489


>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/105 (67%), Positives = 83/105 (79%)
 Frame = -1

Query: 322 TFGNVEMAERASRALLEMGSNSDGDFVLLSNTYAAHERWDDVGRVREAMRSRDVKKVPGF 143
           T+G+VEMAE ASR L+EMG  S G FVLLSN YAA +RWDDVGRVR+AMR RDVKK PGF
Sbjct: 385 TYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGF 444

Query: 142 SFIEVEGAIHKFFNGDQSHPGWREIYRKLDEIGFRV*EYGYVPET 8
           S+IE++G ++KF NGDQSH   REIY KLDEI  R+  YGY  +T
Sbjct: 445 SYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADT 489