BLASTX nr result

ID: Coptis25_contig00006515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006515
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE44289.1| beta-tubulin [Dimocarpus longan]                       436   e-120
gb|AAA32886.1| beta-8 tubulin [Arabidopsis thaliana]                  436   e-120
gb|ABA46773.1| unknown [Solanum tuberosum]                            436   e-120
gb|ABA46752.1| unknown [Solanum tuberosum]                            436   e-120
sp|Q40106.1|TBB2_LUPAL RecName: Full=Tubulin beta-2 chain; AltNa...   436   e-120

>gb|AGE44289.1| beta-tubulin [Dimocarpus longan]
          Length = 446

 Score =  436 bits (1120), Expect = e-120
 Identities = 211/211 (100%), Positives = 211/211 (100%)
 Frame = -3

Query: 634 CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 455
           CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI
Sbjct: 199 CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 258

Query: 454 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 275
           PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR
Sbjct: 259 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 318

Query: 274 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 95
           GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF
Sbjct: 319 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 378

Query: 94  RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 2
           RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409


>gb|AAA32886.1| beta-8 tubulin [Arabidopsis thaliana]
          Length = 449

 Score =  436 bits (1120), Expect = e-120
 Identities = 211/211 (100%), Positives = 211/211 (100%)
 Frame = -3

Query: 634 CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 455
           CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI
Sbjct: 199 CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 258

Query: 454 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 275
           PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR
Sbjct: 259 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 318

Query: 274 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 95
           GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF
Sbjct: 319 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 378

Query: 94  RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 2
           RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409


>gb|ABA46773.1| unknown [Solanum tuberosum]
          Length = 447

 Score =  436 bits (1120), Expect = e-120
 Identities = 211/211 (100%), Positives = 211/211 (100%)
 Frame = -3

Query: 634 CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 455
           CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI
Sbjct: 199 CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 258

Query: 454 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 275
           PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR
Sbjct: 259 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 318

Query: 274 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 95
           GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF
Sbjct: 319 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 378

Query: 94  RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 2
           RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409


>gb|ABA46752.1| unknown [Solanum tuberosum]
          Length = 447

 Score =  436 bits (1120), Expect = e-120
 Identities = 211/211 (100%), Positives = 211/211 (100%)
 Frame = -3

Query: 634 CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 455
           CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI
Sbjct: 199 CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 258

Query: 454 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 275
           PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR
Sbjct: 259 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 318

Query: 274 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 95
           GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF
Sbjct: 319 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 378

Query: 94  RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 2
           RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409


>sp|Q40106.1|TBB2_LUPAL RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
           gi|1399450|gb|AAB03267.1| beta-tubulin 2 [Lupinus albus]
          Length = 448

 Score =  436 bits (1120), Expect = e-120
 Identities = 211/211 (100%), Positives = 211/211 (100%)
 Frame = -3

Query: 634 CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 455
           CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI
Sbjct: 199 CMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 258

Query: 454 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 275
           PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR
Sbjct: 259 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 318

Query: 274 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 95
           GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF
Sbjct: 319 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 378

Query: 94  RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 2
           RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409


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