BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006513
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||JC2510 beta-tubulin R1623 - rice                                 416   e-114
ref|NP_001042761.1| Os01g0282800 [Oryza sativa Japonica Group] g...   416   e-114
sp|Q9ZPN9.1|TBB2_ELEIN RecName: Full=Tubulin beta-2 chain; AltNa...   416   e-114
sp|Q41785.1|TBB8_MAIZE RecName: Full=Tubulin beta-8 chain; AltNa...   416   e-114
tpg|DAA57202.1| TPA: beta tubulin6 [Zea mays]                         416   e-114

>pir||JC2510 beta-tubulin R1623 - rice
          Length = 446

 Score =  416 bits (1070), Expect = e-114
 Identities = 204/205 (99%), Positives = 205/205 (100%)
 Frame = +3

Query: 3   LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 182
           LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246

Query: 183 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 362
           NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPR
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306

Query: 363 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 542
           HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST
Sbjct: 307 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 366

Query: 543 FIGNSTSIQEMFRRVSEQFTAMFRR 617
           FIGNSTSIQEMFRRVSEQFTAMFRR
Sbjct: 367 FIGNSTSIQEMFRRVSEQFTAMFRR 391


>ref|NP_001042761.1| Os01g0282800 [Oryza sativa Japonica Group]
           gi|74053560|sp|Q43594.2|TBB1_ORYSJ RecName: Full=Tubulin
           beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|13486716|dbj|BAB39951.1| putative tubulin beta-4
           chain [Oryza sativa Japonica Group]
           gi|15408819|dbj|BAB64211.1| putative beta-tubulin 4
           [Oryza sativa Japonica Group]
           gi|113532292|dbj|BAF04675.1| Os01g0282800 [Oryza sativa
           Japonica Group] gi|125525429|gb|EAY73543.1| hypothetical
           protein OsI_01426 [Oryza sativa Indica Group]
           gi|215768577|dbj|BAH00806.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 447

 Score =  416 bits (1070), Expect = e-114
 Identities = 204/205 (99%), Positives = 205/205 (100%)
 Frame = +3

Query: 3   LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 182
           LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246

Query: 183 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 362
           NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPR
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306

Query: 363 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 542
           HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST
Sbjct: 307 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 366

Query: 543 FIGNSTSIQEMFRRVSEQFTAMFRR 617
           FIGNSTSIQEMFRRVSEQFTAMFRR
Sbjct: 367 FIGNSTSIQEMFRRVSEQFTAMFRR 391


>sp|Q9ZPN9.1|TBB2_ELEIN RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
           gi|4415992|gb|AAD20179.1| beta-tubulin 2 [Eleusine
           indica]
          Length = 448

 Score =  416 bits (1070), Expect = e-114
 Identities = 204/205 (99%), Positives = 205/205 (100%)
 Frame = +3

Query: 3   LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 182
           LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246

Query: 183 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 362
           NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPR
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306

Query: 363 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 542
           HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST
Sbjct: 307 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 366

Query: 543 FIGNSTSIQEMFRRVSEQFTAMFRR 617
           FIGNSTSIQEMFRRVSEQFTAMFRR
Sbjct: 367 FIGNSTSIQEMFRRVSEQFTAMFRR 391


>sp|Q41785.1|TBB8_MAIZE RecName: Full=Tubulin beta-8 chain; AltName: Full=Beta-8-tubulin
           gi|416151|gb|AAA19709.1| beta-8 tubulin [Zea mays]
          Length = 445

 Score =  416 bits (1070), Expect = e-114
 Identities = 204/205 (99%), Positives = 205/205 (100%)
 Frame = +3

Query: 3   LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 182
           LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246

Query: 183 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 362
           NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPR
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306

Query: 363 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 542
           HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST
Sbjct: 307 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 366

Query: 543 FIGNSTSIQEMFRRVSEQFTAMFRR 617
           FIGNSTSIQEMFRRVSEQFTAMFRR
Sbjct: 367 FIGNSTSIQEMFRRVSEQFTAMFRR 391


>tpg|DAA57202.1| TPA: beta tubulin6 [Zea mays]
          Length = 488

 Score =  416 bits (1070), Expect = e-114
 Identities = 204/205 (99%), Positives = 205/205 (100%)
 Frame = +3

Query: 3   LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 182
           LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 229 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 288

Query: 183 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 362
           NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPR
Sbjct: 289 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 348

Query: 363 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 542
           HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST
Sbjct: 349 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 408

Query: 543 FIGNSTSIQEMFRRVSEQFTAMFRR 617
           FIGNSTSIQEMFRRVSEQFTAMFRR
Sbjct: 409 FIGNSTSIQEMFRRVSEQFTAMFRR 433