BLASTX nr result

ID: Coptis25_contig00006504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006504
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21297.3| unnamed protein product [Vitis vinifera]              153   2e-47
ref|XP_002274525.1| PREDICTED: translocon-associated protein sub...   153   2e-47
ref|XP_004145695.1| PREDICTED: translocon-associated protein sub...   151   2e-47
ref|XP_002274610.2| PREDICTED: translocon-associated protein sub...   153   2e-47
ref|NP_001238351.1| uncharacterized protein LOC100306406 precurs...   159   3e-47

>emb|CBI21297.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  153 bits (386), Expect(2) = 2e-47
 Identities = 71/93 (76%), Positives = 81/93 (87%)
 Frame = +3

Query: 312 TAYDVMLTDDSWPSDAFEVVSGKTSTSWERLDAGSIVAHSFTLESKVKGLFHGSPAIIKF 491
           TAYDV LTDDSW  D F +VSG TSTSWERLDAG +++H+F LESKV+G+F+G+PA+I F
Sbjct: 58  TAYDVSLTDDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITF 117

Query: 492 RIPTKAALQEAYSTPILPLDILADRPAEKKFEW 590
           RIPT AALQEAYSTPILPLDILA RP EKKFEW
Sbjct: 118 RIPTTAALQEAYSTPILPLDILAVRPPEKKFEW 150



 Score = 61.6 bits (148), Expect(2) = 2e-47
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 124 VFASSSDSQQQLPFIVAHKKVGLTKLKSGSEKVSVSIDIYNQGS 255
           +  SS+     +PFIVAHKK  LT+LKSG+E+VSVSIDIYNQGS
Sbjct: 13  ILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 56


>ref|XP_002274525.1| PREDICTED: translocon-associated protein subunit beta isoform 1
           [Vitis vinifera]
          Length = 191

 Score =  153 bits (386), Expect(2) = 2e-47
 Identities = 71/93 (76%), Positives = 81/93 (87%)
 Frame = +3

Query: 312 TAYDVMLTDDSWPSDAFEVVSGKTSTSWERLDAGSIVAHSFTLESKVKGLFHGSPAIIKF 491
           TAYDV LTDDSW  D F +VSG TSTSWERLDAG +++H+F LESKV+G+F+G+PA+I F
Sbjct: 58  TAYDVSLTDDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITF 117

Query: 492 RIPTKAALQEAYSTPILPLDILADRPAEKKFEW 590
           RIPT AALQEAYSTPILPLDILA RP EKKFEW
Sbjct: 118 RIPTTAALQEAYSTPILPLDILAVRPPEKKFEW 150



 Score = 61.6 bits (148), Expect(2) = 2e-47
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 124 VFASSSDSQQQLPFIVAHKKVGLTKLKSGSEKVSVSIDIYNQGS 255
           +  SS+     +PFIVAHKK  LT+LKSG+E+VSVSIDIYNQGS
Sbjct: 13  ILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 56


>ref|XP_004145695.1| PREDICTED: translocon-associated protein subunit beta-like isoform
           1 [Cucumis sativus] gi|449455916|ref|XP_004145696.1|
           PREDICTED: translocon-associated protein subunit
           beta-like isoform 2 [Cucumis sativus]
           gi|449492917|ref|XP_004159140.1| PREDICTED:
           translocon-associated protein subunit beta-like isoform
           1 [Cucumis sativus] gi|449492920|ref|XP_004159141.1|
           PREDICTED: translocon-associated protein subunit
           beta-like isoform 2 [Cucumis sativus]
          Length = 190

 Score =  151 bits (382), Expect(2) = 2e-47
 Identities = 69/93 (74%), Positives = 80/93 (86%)
 Frame = +3

Query: 312 TAYDVMLTDDSWPSDAFEVVSGKTSTSWERLDAGSIVAHSFTLESKVKGLFHGSPAIIKF 491
           TAYDV L D SWP D F++VSG+TS SWERLDAG  V+HSF LE+K +G+FHGSPA+I F
Sbjct: 58  TAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITF 117

Query: 492 RIPTKAALQEAYSTPILPLDILADRPAEKKFEW 590
           R+PTK+ALQEA STPILPLD+LADRP EKKFEW
Sbjct: 118 RVPTKSALQEALSTPILPLDVLADRPPEKKFEW 150



 Score = 63.2 bits (152), Expect(2) = 2e-47
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = +1

Query: 124 VFASSSDSQQQLPFIVAHKKVGLTKLKSGSEKVSVSIDIYNQGS 255
           +F SS+ +   +PFIVAHKK  LT+LKSG+E+VSVSIDIYNQGS
Sbjct: 13  LFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 56


>ref|XP_002274610.2| PREDICTED: translocon-associated protein subunit beta isoform 2
           [Vitis vinifera]
          Length = 189

 Score =  153 bits (386), Expect(2) = 2e-47
 Identities = 71/93 (76%), Positives = 81/93 (87%)
 Frame = +3

Query: 312 TAYDVMLTDDSWPSDAFEVVSGKTSTSWERLDAGSIVAHSFTLESKVKGLFHGSPAIIKF 491
           TAYDV LTDDSW  D F +VSG TSTSWERLDAG +++H+F LESKV+G+F+G+PA+I F
Sbjct: 58  TAYDVSLTDDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITF 117

Query: 492 RIPTKAALQEAYSTPILPLDILADRPAEKKFEW 590
           RIPT AALQEAYSTPILPLDILA RP EKKFEW
Sbjct: 118 RIPTTAALQEAYSTPILPLDILAVRPPEKKFEW 150



 Score = 61.6 bits (148), Expect(2) = 2e-47
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 124 VFASSSDSQQQLPFIVAHKKVGLTKLKSGSEKVSVSIDIYNQGS 255
           +  SS+     +PFIVAHKK  LT+LKSG+E+VSVSIDIYNQGS
Sbjct: 13  ILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 56


>ref|NP_001238351.1| uncharacterized protein LOC100306406 precursor [Glycine max]
           gi|255628433|gb|ACU14561.1| unknown [Glycine max]
          Length = 194

 Score =  159 bits (403), Expect(2) = 3e-47
 Identities = 72/93 (77%), Positives = 84/93 (90%)
 Frame = +3

Query: 312 TAYDVMLTDDSWPSDAFEVVSGKTSTSWERLDAGSIVAHSFTLESKVKGLFHGSPAIIKF 491
           TAYDV L+DDSWPSDAF+V+SG TS SWERLDAG I++H+F LE+K KG+F G PA+IKF
Sbjct: 62  TAYDVSLSDDSWPSDAFDVISGSTSKSWERLDAGGIISHTFELEAKSKGVFAGEPAVIKF 121

Query: 492 RIPTKAALQEAYSTPILPLDILADRPAEKKFEW 590
           R+PTKAALQEAYSTPILPLD+L+DRP EKKFEW
Sbjct: 122 RVPTKAALQEAYSTPILPLDVLSDRPPEKKFEW 154



 Score = 54.7 bits (130), Expect(2) = 3e-47
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = +1

Query: 145 SQQQLPFIVAHKKVGLTKLKSGSEKVSVSIDIYNQGS 255
           +   +PFIVAHKK  L +LKSG+E+VSV+IDIYNQG+
Sbjct: 24  ASSDVPFIVAHKKASLNRLKSGAERVSVTIDIYNQGT 60


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