BLASTX nr result

ID: Coptis25_contig00006501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006501
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525964.1| Proteasome maturation protein, putative [Ric...   213   3e-53
ref|XP_004141496.1| PREDICTED: cyclin-B1-2-like [Cucumis sativus]     212   3e-53
gb|AFK46972.1| unknown [Lotus japonicus]                              206   2e-51
ref|XP_002283197.1| PREDICTED: cyclin-B1-2 [Vitis vinifera] gi|2...   204   9e-51
ref|NP_001190435.1| protein acclimation of photosynthesis to env...   201   8e-50

>ref|XP_002525964.1| Proteasome maturation protein, putative [Ricinus communis]
           gi|223534696|gb|EEF36388.1| Proteasome maturation
           protein, putative [Ricinus communis]
          Length = 142

 Score =  213 bits (541), Expect = 3e-53
 Identities = 104/141 (73%), Positives = 121/141 (85%), Gaps = 1/141 (0%)
 Frame = -2

Query: 578 MESSKKTIEHEIGGIQNDALRFGLNGVKSDILEVHPVQTANQSVKKTEAEIKRMILENTY 399
           ME+SK TI HE GGIQNDALRFGL+GVKSDILE HP+++A QS +KT+ E++  IL NTY
Sbjct: 1   MEASKTTISHETGGIQNDALRFGLHGVKSDILESHPLESAYQSARKTQEEMRTKILGNTY 60

Query: 398 GSAFPLKMDLDRQILARFQRPPGALPSAMLGYEALTGSLDDFGFEDFSN-PQDSETYRPV 222
           GSAFPLKMD +RQIL+RFQRPPG +PS+MLG EALTGSLDDFGFED+ N P++SET R  
Sbjct: 61  GSAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESETIRTP 120

Query: 221 DMHHGMEVRLGLSKGPVAPSF 159
           DMHH MEVR+GLSKGPV PSF
Sbjct: 121 DMHHAMEVRVGLSKGPVCPSF 141


>ref|XP_004141496.1| PREDICTED: cyclin-B1-2-like [Cucumis sativus]
          Length = 141

 Score =  212 bits (540), Expect = 3e-53
 Identities = 104/141 (73%), Positives = 123/141 (87%), Gaps = 1/141 (0%)
 Frame = -2

Query: 578 MESSKKTIEHEIGGIQNDALRFGLNGVKSDILEVHPVQTANQSVKKTEAEIKRMILENTY 399
           MESSK  I HEIGGIQNDALRFGL GVKSD++  HPV++  ++ ++T+ E+KR +L NTY
Sbjct: 1   MESSK-AIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTY 59

Query: 398 GSAFPLKMDLDRQILARFQRPPGALPSAMLGYEALTGSLDDFGFEDFSN-PQDSETYRPV 222
           GSAFPLKMDLDRQIL+RFQRPPG +PS+MLG EALTGSLDDFGFED+ N P++SE+ RP+
Sbjct: 60  GSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPL 119

Query: 221 DMHHGMEVRLGLSKGPVAPSF 159
           DMHHGMEVRLGLSKGPV PSF
Sbjct: 120 DMHHGMEVRLGLSKGPVCPSF 140


>gb|AFK46972.1| unknown [Lotus japonicus]
          Length = 142

 Score =  206 bits (524), Expect = 2e-51
 Identities = 100/141 (70%), Positives = 118/141 (83%), Gaps = 1/141 (0%)
 Frame = -2

Query: 578 MESSKKTIEHEIGGIQNDALRFGLNGVKSDILEVHPVQTANQSVKKTEAEIKRMILENTY 399
           ME + K+I H+IGGIQNDALRFGL GVKSDI+  HP+Q+A +S  K    +KR  + N Y
Sbjct: 1   MEEAAKSIAHQIGGIQNDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLY 60

Query: 398 GSAFPLKMDLDRQILARFQRPPGALPSAMLGYEALTGSLDDFGFEDF-SNPQDSETYRPV 222
           G+AFPLKMDLDRQIL+RFQRP GA+PS+MLG EA TGSLDDFGFED+ S+P++SET RP+
Sbjct: 61  GAAFPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFTGSLDDFGFEDYLSDPRESETIRPL 120

Query: 221 DMHHGMEVRLGLSKGPVAPSF 159
           DMHHGMEVRLGLSKGPV PSF
Sbjct: 121 DMHHGMEVRLGLSKGPVCPSF 141


>ref|XP_002283197.1| PREDICTED: cyclin-B1-2 [Vitis vinifera]
           gi|298204380|emb|CBI16860.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  204 bits (519), Expect = 9e-51
 Identities = 98/136 (72%), Positives = 118/136 (86%), Gaps = 1/136 (0%)
 Frame = -2

Query: 563 KTIEHEIGGIQNDALRFGLNGVKSDILEVHPVQTANQSVKKTEAEIKRMILENTYGSAFP 384
           KTI HEIGG++NDALRFGL GVKSDI+  HP+++A QS ++ +  +KR IL NTYG+AFP
Sbjct: 5   KTIAHEIGGVRNDALRFGLQGVKSDIVGSHPLESAYQSQREIQEGMKRKILANTYGTAFP 64

Query: 383 LKMDLDRQILARFQRPPGALPSAMLGYEALTGSLDDFGFEDF-SNPQDSETYRPVDMHHG 207
           LKMDLD QIL+RFQRPPGA+PS+MLG EALTGSLD+FGFED+ S+P DSET+RP DMHHG
Sbjct: 65  LKMDLDAQILSRFQRPPGAIPSSMLGLEALTGSLDNFGFEDYLSDPCDSETFRPADMHHG 124

Query: 206 MEVRLGLSKGPVAPSF 159
           MEVR G+SKGP+ PSF
Sbjct: 125 MEVRHGISKGPICPSF 140


>ref|NP_001190435.1| protein acclimation of photosynthesis to environment [Arabidopsis
           thaliana] gi|332006963|gb|AED94346.1| protein
           acclimation of photosynthesis to environment
           [Arabidopsis thaliana]
          Length = 431

 Score =  201 bits (511), Expect = 8e-50
 Identities = 97/142 (68%), Positives = 122/142 (85%), Gaps = 1/142 (0%)
 Frame = -2

Query: 581 KMESSKKTIEHEIGGIQNDALRFGLNGVKSDILEVHPVQTANQSVKKTEAEIKRMILENT 402
           +MES KK I HEIGG++NDALRFGL+GVKSDIL  HP++TA +S K+++ E+KR ++ +T
Sbjct: 290 EMESQKK-IAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHT 348

Query: 401 YGSAFPLKMDLDRQILARFQRPPGALPSAMLGYEALTGSLDDFGFEDFSN-PQDSETYRP 225
           YG+A PLKMDLDRQIL+RFQRPPG +PS+MLG E  TG+LD+FGFED+ N P++SET +P
Sbjct: 349 YGAALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKP 408

Query: 224 VDMHHGMEVRLGLSKGPVAPSF 159
           VD HHGMEVRLGLSKGP +PSF
Sbjct: 409 VDFHHGMEVRLGLSKGPASPSF 430


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