BLASTX nr result
ID: Coptis25_contig00006497
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006497
(2055 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 39 3e-07
gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi... 39 3e-07
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 40 3e-07
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 37 4e-07
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo... 37 5e-07
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 39.3 bits (90), Expect(3) = 3e-07
Identities = 33/130 (25%), Positives = 48/130 (36%), Gaps = 8/130 (6%)
Frame = +2
Query: 1097 VDPVCYLCAGASETHLHLFESCPFARAIWFGLNLTKAINATRNDDFLTWLSDMFSTLART 1276
VD C +C +E HLF C + +W LNL + L M
Sbjct: 1339 VDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEE-------------LRSMLEQQTSG 1385
Query: 1277 NNHIHCFVLFPMN--------LWIIWLERNKYRFQTTYAPPNPINLIRQIQNQTQELLQL 1432
N + P N LW W ERN+ R P +P L I +Q E +++
Sbjct: 1386 KNVLQSIYCRPENERTSAIVCLWQWWKERNEVR--EGGIPRSPAELSHLIMSQAGEFVRM 1443
Query: 1433 HRRPRDLTTG 1462
+ + + TG
Sbjct: 1444 NVKEKSPRTG 1453
Score = 33.5 bits (75), Expect(3) = 3e-07
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 1014 YKKIWKLLVPYKIRFFLWQM 1073
+KK+WKL VP KI+ FLW+M
Sbjct: 1302 WKKLWKLGVPGKIKHFLWRM 1321
Score = 29.3 bits (64), Expect(3) = 3e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 1504 PLNFLKFNVDGSSLGNSGPAGAG*VLRNAYGGFM 1605
PLNF+K N DG+ N G G V+++ G +
Sbjct: 1462 PLNFVKINTDGAYSSNMKQGGWGFVIKDQTGAVL 1495
>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
Length = 561
Score = 39.3 bits (90), Expect(3) = 3e-07
Identities = 31/122 (25%), Positives = 52/122 (42%)
Frame = +2
Query: 1097 VDPVCYLCAGASETHLHLFESCPFARAIWFGLNLTKAINATRNDDFLTWLSDMFSTLART 1276
VD C +C +E HLF C + +W LNL + + + + + + S R
Sbjct: 279 VDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSMLKQQ--TSGKNVLQSIYCRP 336
Query: 1277 NNHIHCFVLFPMNLWIIWLERNKYRFQTTYAPPNPINLIRQIQNQTQELLQLHRRPRDLT 1456
N ++ LW W ERN+ R P +P L I +Q E ++++ + +
Sbjct: 337 ENERTSAIVC---LWQWWKERNEVR--EGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPR 391
Query: 1457 TG 1462
TG
Sbjct: 392 TG 393
Score = 33.5 bits (75), Expect(3) = 3e-07
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 1014 YKKIWKLLVPYKIRFFLWQM 1073
+KK+WKL VP KI+ FLW+M
Sbjct: 242 WKKLWKLGVPGKIKHFLWRM 261
Score = 29.3 bits (64), Expect(3) = 3e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 1504 PLNFLKFNVDGSSLGNSGPAGAG*VLRNAYGGFM 1605
PLNF+K N DG+ N G G V+++ G +
Sbjct: 402 PLNFVKINTDGAYSSNMKQGGWGFVIKDQTGAVL 435
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 40.4 bits (93), Expect(3) = 3e-07
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 1/136 (0%)
Frame = +2
Query: 1100 DPVCYLCAGASETHLHLFESCPFARAIWFGLNLTKAINATRNDDFLTWLSDMFSTLARTN 1279
DP C +C E H+ CP AR +W L + N + +W++ S A T
Sbjct: 1082 DPRCLVCGEVEENTDHILRRCPVARILWRKLGMLGEHN-REEINLGSWITKNLS--ADTM 1138
Query: 1280 NHIHCFVLFPMNLWIIWLERNKYRFQTTYAPPNPINLIRQIQNQTQELLQ-LHRRPRDLT 1456
+F ++ W +W RN F P PI+ + I + +E+ + + R + +
Sbjct: 1139 MGSEWLRVFAVSCWWLWRWRNDRCFNRN--PSIPIDQVSFIFARVKEIKEAMDRNDTNKS 1196
Query: 1457 TGLTVPASILVFWHSP 1504
ILV W P
Sbjct: 1197 QHSGRRKEILVRWQCP 1212
Score = 33.5 bits (75), Expect(3) = 3e-07
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 1513 FLKFNVDGSSLGNSGPAGAG*VLRNAYG 1596
++K N DG+S GN GPAG G ++R G
Sbjct: 1216 WVKLNTDGASKGNPGPAGGGGLIRGPRG 1243
Score = 27.7 bits (60), Expect(3) = 3e-07
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 1014 YKKIWKLLVPYKIRFFLW 1067
+ +WK+ P ++RFF+W
Sbjct: 1044 WSAVWKIPTPQRVRFFIW 1061
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 37.4 bits (85), Expect(3) = 4e-07
Identities = 33/137 (24%), Positives = 50/137 (36%), Gaps = 8/137 (5%)
Frame = +2
Query: 1076 LAAKSFRVDPVCYLCAGASETHLHLFESCPFARAIWFGLNLTKAINATRNDDFLTWLSDM 1255
L + VD C +C +E HLF C + +W LNL + L M
Sbjct: 1305 LQHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEE-------------LRSM 1351
Query: 1256 FSTLARTNNHIHCFVLFP--------MNLWIIWLERNKYRFQTTYAPPNPINLIRQIQNQ 1411
N + P + LW W ERN+ R P +P L I +Q
Sbjct: 1352 LEQQTSGKNVLQSIYCRPEIERTSAIVCLWQWWKERNEVR--EGGIPRSPAELSHLIMSQ 1409
Query: 1412 TQELLQLHRRPRDLTTG 1462
E ++++ + + TG
Sbjct: 1410 AGEFVRMNVKEKSPRTG 1426
Score = 33.5 bits (75), Expect(3) = 4e-07
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 1014 YKKIWKLLVPYKIRFFLWQM 1073
+KK+WKL VP KI+ FLW+M
Sbjct: 1275 WKKLWKLGVPGKIKHFLWRM 1294
Score = 30.4 bits (67), Expect(3) = 4e-07
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 1504 PLNFLKFNVDGSSLGNSGPAGAG*VLRNAYGGFM 1605
PLNF+K N DG+ N G G V+R+ G +
Sbjct: 1435 PLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVL 1468
>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
Length = 639
Score = 37.4 bits (85), Expect(3) = 5e-07
Identities = 33/137 (24%), Positives = 50/137 (36%), Gaps = 8/137 (5%)
Frame = +2
Query: 1076 LAAKSFRVDPVCYLCAGASETHLHLFESCPFARAIWFGLNLTKAINATRNDDFLTWLSDM 1255
L + VD C +C +E HLF C + +W LNL + L M
Sbjct: 272 LQHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEE-------------LRSM 318
Query: 1256 FSTLARTNNHIHCFVLFP--------MNLWIIWLERNKYRFQTTYAPPNPINLIRQIQNQ 1411
N + P + LW W ERN+ R P +P L I +Q
Sbjct: 319 LEQQTSGKNVLQSIYCRPEIERTSAIVCLWQWWKERNEVR--EGGIPRSPAELSHLIMSQ 376
Query: 1412 TQELLQLHRRPRDLTTG 1462
E ++++ + + TG
Sbjct: 377 AGEFVRMNVKEKSPRTG 393
Score = 33.5 bits (75), Expect(3) = 5e-07
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 1014 YKKIWKLLVPYKIRFFLWQM 1073
+KK+WKL VP KI+ FLW+M
Sbjct: 242 WKKLWKLGVPGKIKHFLWRM 261
Score = 30.4 bits (67), Expect(3) = 5e-07
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 1504 PLNFLKFNVDGSSLGNSGPAGAG*VLRNAYGGFM 1605
PLNF+K N DG+ N G G V+R+ G +
Sbjct: 402 PLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVL 435