BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006495
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...   308   1e-81
gb|ABR16597.1| unknown [Picea sitchensis]                             295   9e-78
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...   295   1e-77
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...   294   3e-77
ref|XP_003573797.1| PREDICTED: general transcription factor IIE ...   272   1e-70

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
            vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
            product [Vitis vinifera]
          Length = 475

 Score =  308 bits (790), Expect = 1e-81
 Identities = 157/233 (67%), Positives = 178/233 (76%), Gaps = 2/233 (0%)
 Frame = +3

Query: 342  ETAKGAKIFSAAVAATADGLM-KEGEDKLKLHTHSYCCLDYAQXXXXXXXXXXXXXXXXX 518
            ETAKGAKI+SAA+AAT DG   KEG++K+KLHTHSYCCLDYAQ                 
Sbjct: 89   ETAKGAKIYSAAIAATGDGQQTKEGDEKIKLHTHSYCCLDYAQ----------------- 131

Query: 519  XXXXXXXXXIYDVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISPND 698
                     IYDVVRYR+HRMKKKLKDELE++NTVQEYICPNC +RY ALDALRLIS  D
Sbjct: 132  ---------IYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCGKRYNALDALRLISMED 182

Query: 699  EYFHCENCDTVLVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLARI 878
            EYFHCE+C+  LVA SDKLA+ EIGDGDDNAR RR EKLKD+LQKM+VQLKPLM+QL+R+
Sbjct: 183  EYFHCESCNGELVAESDKLASQEIGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLSRV 242

Query: 879  KDLPAPEFGSLQAWE-XXXXXXXXXNGDSSTNDPSKSSLGQGYGGTPMPYLGE 1034
            KDLP PEFGSLQAWE          NGDS+ ND SKSS G G+GGTPMP++GE
Sbjct: 243  KDLPVPEFGSLQAWEARANAAGRAANGDSNANDSSKSSQGLGFGGTPMPFVGE 295


>gb|ABR16597.1| unknown [Picea sitchensis]
          Length = 480

 Score =  295 bits (756), Expect = 9e-78
 Identities = 150/234 (64%), Positives = 177/234 (75%), Gaps = 3/234 (1%)
 Frame = +3

Query: 342  ETAKGAKIFSAAVAATADGLM--KEGEDKLKLHTHSYCCLDYAQXXXXXXXXXXXXXXXX 515
            ETAKGAK+F+AA+AATADG    KEGE+KLKLHTHSYCCLDYAQ                
Sbjct: 89   ETAKGAKVFNAAIAATADGQQNGKEGEEKLKLHTHSYCCLDYAQT--------------- 133

Query: 516  XXXXXXXXXXIYDVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISPN 695
                       YDVVRYR+HRMKK+LKDELE+RNT+QEYICPNCNRRY+ALDAL+LIS  
Sbjct: 134  -----------YDVVRYRIHRMKKRLKDELEDRNTLQEYICPNCNRRYSALDALQLISFT 182

Query: 696  DEYFHCENCDTVLVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLAR 875
            ++ FHCENC++ LVA SDKLAA+E GDG+DN R RR EKLK++L+KM+VQLKPLMEQL R
Sbjct: 183  EDSFHCENCNSELVAESDKLAAEEKGDGEDNGRRRRREKLKELLEKMEVQLKPLMEQLTR 242

Query: 876  IKDLPAPEFGSLQAWE-XXXXXXXXXNGDSSTNDPSKSSLGQGYGGTPMPYLGE 1034
            +KDLP PEFGSL  WE          +GD++ N+ SKSS GQG+GGTPMP+LGE
Sbjct: 243  VKDLPVPEFGSLLQWEARAIAAGRAVSGDTNANESSKSSQGQGFGGTPMPFLGE 296


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  295 bits (755), Expect = 1e-77
 Identities = 155/233 (66%), Positives = 172/233 (73%), Gaps = 2/233 (0%)
 Frame = +3

Query: 342  ETAKGAKIFSAAVAATADG-LMKEGEDKLKLHTHSYCCLDYAQXXXXXXXXXXXXXXXXX 518
            ETAK AK+ +AAVA T DG   KEG+DK+K+HTHSYCCLDYAQ                 
Sbjct: 89   ETAKAAKMHNAAVANTTDGHRTKEGDDKIKMHTHSYCCLDYAQ----------------- 131

Query: 519  XXXXXXXXXIYDVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISPND 698
                     IYDVVRYR+HRM+KKLKDELE++NTVQEY CPNC RRY ALDALRL+S  D
Sbjct: 132  ---------IYDVVRYRLHRMRKKLKDELEDKNTVQEYTCPNCGRRYNALDALRLMSLVD 182

Query: 699  EYFHCENCDTVLVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLARI 878
            EYFHCENCD  LVA SDKLAA E GDGDDNAR RR EKLKD+LQKM+VQLKPLM QL+R+
Sbjct: 183  EYFHCENCDGELVAESDKLAAQEGGDGDDNARRRRREKLKDMLQKMEVQLKPLMAQLSRV 242

Query: 879  KDLPAPEFGSLQAWE-XXXXXXXXXNGDSSTNDPSKSSLGQGYGGTPMPYLGE 1034
            KDLP PEFGSLQ W+          NGDSS NDPS+SS  QGYGGTPMP+LGE
Sbjct: 243  KDLPVPEFGSLQEWQIHASAAGRAANGDSSYNDPSRSS--QGYGGTPMPFLGE 293


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
            sativus]
          Length = 475

 Score =  294 bits (752), Expect = 3e-77
 Identities = 156/234 (66%), Positives = 175/234 (74%), Gaps = 3/234 (1%)
 Frame = +3

Query: 342  ETAKGAKIFSAAVAATADGL--MKEGEDKLKLHTHSYCCLDYAQXXXXXXXXXXXXXXXX 515
            ETAKGAKIFSAAVAATADG    KEG++K+K+HTHSYC LDYAQ                
Sbjct: 89   ETAKGAKIFSAAVAATADGPHHSKEGDEKIKMHTHSYCSLDYAQ---------------- 132

Query: 516  XXXXXXXXXXIYDVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISPN 695
                      +YDVVRYRMHRMKKKLKDELE++NTVQEYICPNC+RRYTALDALRLIS  
Sbjct: 133  ----------VYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISFE 182

Query: 696  DEYFHCENCDTVLVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLAR 875
            DEYFHCENC+  LVA SDKLAA +  DGDDN R RR EKLKD+LQKM+ QLKPL+EQL+R
Sbjct: 183  DEYFHCENCNGELVAESDKLAAVQGVDGDDNVRKRRHEKLKDMLQKMEAQLKPLVEQLSR 242

Query: 876  IKDLPAPEFGSLQAWE-XXXXXXXXXNGDSSTNDPSKSSLGQGYGGTPMPYLGE 1034
            +KDLP PEFG+L AWE          NGD + NDPSKSS  QGYGGTPMP++GE
Sbjct: 243  VKDLPVPEFGTLLAWEARASAAARGINGDLNGNDPSKSS--QGYGGTPMPFVGE 294


>ref|XP_003573797.1| PREDICTED: general transcription factor IIE subunit 1-like
            [Brachypodium distachyon]
          Length = 465

 Score =  272 bits (695), Expect = 1e-70
 Identities = 142/233 (60%), Positives = 166/233 (71%), Gaps = 2/233 (0%)
 Frame = +3

Query: 342  ETAKGAKIFSAAVAATADGLM--KEGEDKLKLHTHSYCCLDYAQXXXXXXXXXXXXXXXX 515
            E+AKGAKI+SAA AA  DG    KEGE+K+KLHTHSYCCLDYAQ                
Sbjct: 90   ESAKGAKIYSAAAAAAGDGQSGTKEGEEKVKLHTHSYCCLDYAQ---------------- 133

Query: 516  XXXXXXXXXXIYDVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISPN 695
                      I DVVRYR+HRMKK LKDEL++RNTVQ YICPNC +RY+A DAL+L+S  
Sbjct: 134  ----------ICDVVRYRIHRMKKTLKDELDSRNTVQHYICPNCKKRYSAFDALQLVSYT 183

Query: 696  DEYFHCENCDTVLVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLAR 875
            DEYFHCENC+  LVA SDKLA++E+GDGDDNAR RR EKL D+ Q++D QLKPL  QL R
Sbjct: 184  DEYFHCENCNGELVAESDKLASEEMGDGDDNARKRRREKLNDMQQRIDEQLKPLQAQLKR 243

Query: 876  IKDLPAPEFGSLQAWEXXXXXXXXXNGDSSTNDPSKSSLGQGYGGTPMPYLGE 1034
            +KDLPAPEFGSLQ+WE         +GD S  D S+++ GQ Y GTPMPYLGE
Sbjct: 244  VKDLPAPEFGSLQSWE-RLNIGAFAHGDPSAADSSRNAQGQ-YNGTPMPYLGE 294