BLASTX nr result
ID: Coptis25_contig00006493
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006493 (234 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004163937.1| PREDICTED: LOW QUALITY PROTEIN: dynamin-rela... 79 4e-13 ref|XP_004147508.1| PREDICTED: dynamin-related protein 3A-like [... 79 4e-13 ref|XP_002869201.1| hypothetical protein ARALYDRAFT_491315 [Arab... 78 7e-13 gb|AAM20619.1| dynamin-like protein [Arabidopsis thaliana] 78 9e-13 ref|NP_565363.2| dynamin-related protein 3B [Arabidopsis thalian... 78 9e-13 >ref|XP_004163937.1| PREDICTED: LOW QUALITY PROTEIN: dynamin-related protein 3A-like [Cucumis sativus] Length = 822 Score = 79.0 bits (193), Expect = 4e-13 Identities = 41/58 (70%), Positives = 46/58 (79%) Frame = +3 Query: 60 PAMGEEHKTSIGSSVIPIVNKLQDIFAPFGDLSKIKLPQVAVIGSQSSGKSSVLEALV 233 P++ +GSSVIPIVNKLQDIFA G S I+LPQVAV+GSQSSGKSSVLEALV Sbjct: 11 PSVSSSAAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSSVLEALV 68 >ref|XP_004147508.1| PREDICTED: dynamin-related protein 3A-like [Cucumis sativus] Length = 822 Score = 79.0 bits (193), Expect = 4e-13 Identities = 41/58 (70%), Positives = 46/58 (79%) Frame = +3 Query: 60 PAMGEEHKTSIGSSVIPIVNKLQDIFAPFGDLSKIKLPQVAVIGSQSSGKSSVLEALV 233 P++ +GSSVIPIVNKLQDIFA G S I+LPQVAV+GSQSSGKSSVLEALV Sbjct: 11 PSVSSSAAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSSVLEALV 68 >ref|XP_002869201.1| hypothetical protein ARALYDRAFT_491315 [Arabidopsis lyrata subsp. lyrata] gi|297315037|gb|EFH45460.1| hypothetical protein ARALYDRAFT_491315 [Arabidopsis lyrata subsp. lyrata] Length = 808 Score = 78.2 bits (191), Expect = 7e-13 Identities = 41/58 (70%), Positives = 45/58 (77%) Frame = +3 Query: 60 PAMGEEHKTSIGSSVIPIVNKLQDIFAPFGDLSKIKLPQVAVIGSQSSGKSSVLEALV 233 P+ + +GSSVIPIVNKLQDIFA G S I LPQVAV+GSQSSGKSSVLEALV Sbjct: 22 PSSSTANAAPLGSSVIPIVNKLQDIFAQLGSQSSIALPQVAVVGSQSSGKSSVLEALV 79 >gb|AAM20619.1| dynamin-like protein [Arabidopsis thaliana] Length = 780 Score = 77.8 bits (190), Expect = 9e-13 Identities = 41/50 (82%), Positives = 43/50 (86%) Frame = +3 Query: 84 TSIGSSVIPIVNKLQDIFAPFGDLSKIKLPQVAVIGSQSSGKSSVLEALV 233 T +GSSVIPIVNKLQDIFA G S I LPQVAV+GSQSSGKSSVLEALV Sbjct: 15 TPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVAVVGSQSSGKSSVLEALV 64 >ref|NP_565363.2| dynamin-related protein 3B [Arabidopsis thaliana] gi|330251189|gb|AEC06283.1| dynamin-related protein 3B [Arabidopsis thaliana] Length = 780 Score = 77.8 bits (190), Expect = 9e-13 Identities = 41/50 (82%), Positives = 43/50 (86%) Frame = +3 Query: 84 TSIGSSVIPIVNKLQDIFAPFGDLSKIKLPQVAVIGSQSSGKSSVLEALV 233 T +GSSVIPIVNKLQDIFA G S I LPQVAV+GSQSSGKSSVLEALV Sbjct: 15 TPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVAVVGSQSSGKSSVLEALV 64