BLASTX nr result

ID: Coptis25_contig00006493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006493
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163937.1| PREDICTED: LOW QUALITY PROTEIN: dynamin-rela...    79   4e-13
ref|XP_004147508.1| PREDICTED: dynamin-related protein 3A-like [...    79   4e-13
ref|XP_002869201.1| hypothetical protein ARALYDRAFT_491315 [Arab...    78   7e-13
gb|AAM20619.1| dynamin-like protein [Arabidopsis thaliana]             78   9e-13
ref|NP_565363.2| dynamin-related protein 3B [Arabidopsis thalian...    78   9e-13

>ref|XP_004163937.1| PREDICTED: LOW QUALITY PROTEIN: dynamin-related protein 3A-like
           [Cucumis sativus]
          Length = 822

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/58 (70%), Positives = 46/58 (79%)
 Frame = +3

Query: 60  PAMGEEHKTSIGSSVIPIVNKLQDIFAPFGDLSKIKLPQVAVIGSQSSGKSSVLEALV 233
           P++       +GSSVIPIVNKLQDIFA  G  S I+LPQVAV+GSQSSGKSSVLEALV
Sbjct: 11  PSVSSSAAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSSVLEALV 68


>ref|XP_004147508.1| PREDICTED: dynamin-related protein 3A-like [Cucumis sativus]
          Length = 822

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/58 (70%), Positives = 46/58 (79%)
 Frame = +3

Query: 60  PAMGEEHKTSIGSSVIPIVNKLQDIFAPFGDLSKIKLPQVAVIGSQSSGKSSVLEALV 233
           P++       +GSSVIPIVNKLQDIFA  G  S I+LPQVAV+GSQSSGKSSVLEALV
Sbjct: 11  PSVSSSAAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSSVLEALV 68


>ref|XP_002869201.1| hypothetical protein ARALYDRAFT_491315 [Arabidopsis lyrata subsp.
           lyrata] gi|297315037|gb|EFH45460.1| hypothetical protein
           ARALYDRAFT_491315 [Arabidopsis lyrata subsp. lyrata]
          Length = 808

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/58 (70%), Positives = 45/58 (77%)
 Frame = +3

Query: 60  PAMGEEHKTSIGSSVIPIVNKLQDIFAPFGDLSKIKLPQVAVIGSQSSGKSSVLEALV 233
           P+    +   +GSSVIPIVNKLQDIFA  G  S I LPQVAV+GSQSSGKSSVLEALV
Sbjct: 22  PSSSTANAAPLGSSVIPIVNKLQDIFAQLGSQSSIALPQVAVVGSQSSGKSSVLEALV 79


>gb|AAM20619.1| dynamin-like protein [Arabidopsis thaliana]
          Length = 780

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/50 (82%), Positives = 43/50 (86%)
 Frame = +3

Query: 84  TSIGSSVIPIVNKLQDIFAPFGDLSKIKLPQVAVIGSQSSGKSSVLEALV 233
           T +GSSVIPIVNKLQDIFA  G  S I LPQVAV+GSQSSGKSSVLEALV
Sbjct: 15  TPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVAVVGSQSSGKSSVLEALV 64


>ref|NP_565363.2| dynamin-related protein 3B [Arabidopsis thaliana]
           gi|330251189|gb|AEC06283.1| dynamin-related protein 3B
           [Arabidopsis thaliana]
          Length = 780

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/50 (82%), Positives = 43/50 (86%)
 Frame = +3

Query: 84  TSIGSSVIPIVNKLQDIFAPFGDLSKIKLPQVAVIGSQSSGKSSVLEALV 233
           T +GSSVIPIVNKLQDIFA  G  S I LPQVAV+GSQSSGKSSVLEALV
Sbjct: 15  TPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVAVVGSQSSGKSSVLEALV 64


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