BLASTX nr result

ID: Coptis25_contig00006492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006492
         (1433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511089.1| nucleotide binding protein, putative [Ricinu...   595   e-167
ref|XP_002318173.1| predicted protein [Populus trichocarpa] gi|2...   593   e-167
gb|ABK95770.1| unknown [Populus trichocarpa]                          593   e-167
ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotei...   592   e-167
ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798...   592   e-167

>ref|XP_002511089.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223550204|gb|EEF51691.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 752

 Score =  595 bits (1533), Expect = e-167
 Identities = 291/393 (74%), Positives = 332/393 (84%)
 Frame = +1

Query: 1    ASFSTNSNGVTKIKGESSYRPSDDLEVIEVQDKGTKRKFEEKEHKELISLIRSSSSPHTI 180
            +S S ++N V K+KGE + R S + EV   + +GTKRK E+KEHKELI LIRSSSSP TI
Sbjct: 154  SSPSRHTNTVPKLKGEKNCRSSPEAEV---EARGTKRKLEQKEHKELIPLIRSSSSPSTI 210

Query: 181  RCQNGVLISSQHKRKLRSLALCPTNDQLFVTSALDGIVNLWEVQAKGSGASLLSSTECMS 360
             C     ISSQHKRKLRSL LCP NDQLF TSALDG+VNLW++Q++GS ASLLS T+C+S
Sbjct: 211  DCYASNNISSQHKRKLRSLILCPVNDQLFATSALDGVVNLWQIQSRGSSASLLSGTDCLS 270

Query: 361  TKQRRWPEDITWHPHGDKLFSVYTADGGDSQISIMNLNTTQKGKRVMYLEESPHVKGIIN 540
             K RRWPED+ WHP G+ LF  Y+ADGGDSQISI+NLN  Q   R+ YLE+ PHVKGIIN
Sbjct: 271  PKDRRWPEDLAWHPLGNSLFCTYSADGGDSQISILNLNKIQGRARITYLEDKPHVKGIIN 330

Query: 541  NIVFMPWEDLCFVTGGSDHAVVFWNEKNGGSSWKCKALHRNLHSSAVMGVAGLQQKNIVL 720
            +I FMPWE+ CF TGGSDHAVVFWNEK+    WK K LHRNLHSSAVMGVAGLQQK+IVL
Sbjct: 331  SISFMPWENACFATGGSDHAVVFWNEKDNEYLWKPKTLHRNLHSSAVMGVAGLQQKHIVL 390

Query: 721  SAGADKRIVGFDVMAGRADFKHQIECKCMSVLPNPSDFNLFMVQTGAHERQLRLFDIRLR 900
            SAGAD+RI+GFDV +GRADFKHQ++ KCMSV+PNP DFNLFMVQTG  E+QLRLFDIRLR
Sbjct: 391  SAGADRRIIGFDVQSGRADFKHQLDNKCMSVVPNPCDFNLFMVQTGIPEKQLRLFDIRLR 450

Query: 901  QTEIHSFGWKQESSESQSALINQAWSPDGLYITSGSADPMIHVFDIRYNSHRPSQSVKAH 1080
            QTE+HSFG+KQESS+SQSALINQAWSPDGLY+TSGS DPMIHVFDIRYNSH+PSQSV+AH
Sbjct: 451  QTELHSFGFKQESSDSQSALINQAWSPDGLYLTSGSVDPMIHVFDIRYNSHKPSQSVRAH 510

Query: 1081 NKRVFKAVWLQSLPLLVSISSDLNVGLHKIA*K 1179
            NKRVFKAVW  SLPLL+SISSDL +GLHKI  K
Sbjct: 511  NKRVFKAVWHSSLPLLISISSDLLIGLHKITVK 543


>ref|XP_002318173.1| predicted protein [Populus trichocarpa] gi|222858846|gb|EEE96393.1|
            predicted protein [Populus trichocarpa]
          Length = 493

 Score =  593 bits (1530), Expect = e-167
 Identities = 282/384 (73%), Positives = 328/384 (85%)
 Frame = +1

Query: 19   SNGVTKIKGESSYRPSDDLEVIEVQDKGTKRKFEEKEHKELISLIRSSSSPHTIRCQNGV 198
            SN   K+K E  +R S D+EV+E+QD+G KRK E+KEHKELI L+  SS+P T+ C    
Sbjct: 110  SNSAVKVKMEKCHRSSSDVEVVEIQDRGNKRKIEQKEHKELIPLVSRSSAPCTVHCHTSN 169

Query: 199  LISSQHKRKLRSLALCPTNDQLFVTSALDGIVNLWEVQAKGSGASLLSSTECMSTKQRRW 378
             ISSQHKRKLRS+A+CP NDQLFV+SALDG++NLW++QA+GSGASLLS+T+ +S  QRRW
Sbjct: 170  HISSQHKRKLRSVAVCPVNDQLFVSSALDGMINLWQLQARGSGASLLSTTDSVSPVQRRW 229

Query: 379  PEDITWHPHGDKLFSVYTADGGDSQISIMNLNTTQKGKRVMYLEESPHVKGIINNIVFMP 558
            PEDI WHP G+ LFS YTAD GD+QIS++NLN TQ   RV +LE+ PH+KGIIN I FMP
Sbjct: 230  PEDIAWHPLGNSLFSAYTADSGDAQISVLNLNKTQGRARVTFLEDKPHIKGIINGIEFMP 289

Query: 559  WEDLCFVTGGSDHAVVFWNEKNGGSSWKCKALHRNLHSSAVMGVAGLQQKNIVLSAGADK 738
            WE+ CFVTGGSDH VV WNEK+  +SWK KALHRN+HSSAVMGVAG+QQK IVLSAGADK
Sbjct: 290  WENTCFVTGGSDHGVVLWNEKDEENSWKPKALHRNMHSSAVMGVAGMQQKQIVLSAGADK 349

Query: 739  RIVGFDVMAGRADFKHQIECKCMSVLPNPSDFNLFMVQTGAHERQLRLFDIRLRQTEIHS 918
            RIVGFDV  GRADFKHQ++ +CMSVLPNP DFNLFMVQTG   +QLRLFDIRLRQTEIHS
Sbjct: 350  RIVGFDVQVGRADFKHQLDSRCMSVLPNPCDFNLFMVQTGTLGKQLRLFDIRLRQTEIHS 409

Query: 919  FGWKQESSESQSALINQAWSPDGLYITSGSADPMIHVFDIRYNSHRPSQSVKAHNKRVFK 1098
            FG+KQESS+SQSALINQAWSPDGLY+TSGS DP+IHVFDIRYN H+PSQS+KAH KRVFK
Sbjct: 410  FGFKQESSDSQSALINQAWSPDGLYLTSGSVDPVIHVFDIRYNYHKPSQSIKAHQKRVFK 469

Query: 1099 AVWLQSLPLLVSISSDLNVGLHKI 1170
            AVW  SLPLL+SISSDL++GLHKI
Sbjct: 470  AVWHYSLPLLISISSDLHIGLHKI 493


>gb|ABK95770.1| unknown [Populus trichocarpa]
          Length = 468

 Score =  593 bits (1530), Expect = e-167
 Identities = 282/384 (73%), Positives = 328/384 (85%)
 Frame = +1

Query: 19   SNGVTKIKGESSYRPSDDLEVIEVQDKGTKRKFEEKEHKELISLIRSSSSPHTIRCQNGV 198
            SN   K+K E  +R S D+EV+E+QD+G KRK E+KEHKELI L+  SS+P T+ C    
Sbjct: 84   SNSAVKVKMEKCHRSSSDVEVVEIQDRGNKRKIEQKEHKELIPLVSRSSAPCTVHCHTSN 143

Query: 199  LISSQHKRKLRSLALCPTNDQLFVTSALDGIVNLWEVQAKGSGASLLSSTECMSTKQRRW 378
             ISSQHKRKLRS+A+CP NDQLFV+SALDG++NLW++QA+GSGASLLS+T+ +S  QRRW
Sbjct: 144  HISSQHKRKLRSVAVCPVNDQLFVSSALDGMINLWQLQARGSGASLLSTTDSVSPVQRRW 203

Query: 379  PEDITWHPHGDKLFSVYTADGGDSQISIMNLNTTQKGKRVMYLEESPHVKGIINNIVFMP 558
            PEDI WHP G+ LFS YTAD GD+QIS++NLN TQ   RV +LE+ PH+KGIIN I FMP
Sbjct: 204  PEDIAWHPLGNSLFSAYTADSGDAQISVLNLNKTQGRARVTFLEDKPHIKGIINGIEFMP 263

Query: 559  WEDLCFVTGGSDHAVVFWNEKNGGSSWKCKALHRNLHSSAVMGVAGLQQKNIVLSAGADK 738
            WE+ CFVTGGSDH VV WNEK+  +SWK KALHRN+HSSAVMGVAG+QQK IVLSAGADK
Sbjct: 264  WENTCFVTGGSDHGVVLWNEKDEENSWKPKALHRNMHSSAVMGVAGMQQKQIVLSAGADK 323

Query: 739  RIVGFDVMAGRADFKHQIECKCMSVLPNPSDFNLFMVQTGAHERQLRLFDIRLRQTEIHS 918
            RIVGFDV  GRADFKHQ++ +CMSVLPNP DFNLFMVQTG   +QLRLFDIRLRQTEIHS
Sbjct: 324  RIVGFDVQVGRADFKHQLDSRCMSVLPNPCDFNLFMVQTGTLGKQLRLFDIRLRQTEIHS 383

Query: 919  FGWKQESSESQSALINQAWSPDGLYITSGSADPMIHVFDIRYNSHRPSQSVKAHNKRVFK 1098
            FG+KQESS+SQSALINQAWSPDGLY+TSGS DP+IHVFDIRYN H+PSQS+KAH KRVFK
Sbjct: 384  FGFKQESSDSQSALINQAWSPDGLYLTSGSVDPVIHVFDIRYNYHKPSQSIKAHQKRVFK 443

Query: 1099 AVWLQSLPLLVSISSDLNVGLHKI 1170
            AVW  SLPLL+SISSDL++GLHKI
Sbjct: 444  AVWHYSLPLLISISSDLHIGLHKI 467


>ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            [Glycine max]
          Length = 533

 Score =  592 bits (1527), Expect = e-167
 Identities = 280/386 (72%), Positives = 331/386 (85%), Gaps = 2/386 (0%)
 Frame = +1

Query: 19   SNGVTKIKGESSY--RPSDDLEVIEVQDKGTKRKFEEKEHKELISLIRSSSSPHTIRCQN 192
            + G ++ K + S+  R S + +  EV++KGTKRKFE+KEHKELI LIR SSSP  + CQ 
Sbjct: 147  TGGSSRGKSDKSHSNRLSSEQQKTEVKEKGTKRKFEQKEHKELIPLIRKSSSPSLVTCQT 206

Query: 193  GVLISSQHKRKLRSLALCPTNDQLFVTSALDGIVNLWEVQAKGSGASLLSSTECMSTKQR 372
               ISSQHKRKLRS+ALCP NDQLFVTSALDG+VN W+VQAKG+GAS LS+T+C S KQR
Sbjct: 207  SNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVNFWQVQAKGAGASRLSTTDCASQKQR 266

Query: 373  RWPEDITWHPHGDKLFSVYTADGGDSQISIMNLNTTQKGKRVMYLEESPHVKGIINNIVF 552
            RWPED+ WHP G+ LFSVY+ADGGDSQ+SI NLN    G+RV +LE+ PHVKGIIN IVF
Sbjct: 267  RWPEDLAWHPEGNSLFSVYSADGGDSQVSITNLNKGPGGERVKFLEDKPHVKGIINGIVF 326

Query: 553  MPWEDLCFVTGGSDHAVVFWNEKNGGSSWKCKALHRNLHSSAVMGVAGLQQKNIVLSAGA 732
            MPWE+ CFVTGGSDHAV+ W+E++    WK KALHRNLHSSAVMGVAG+Q K +VLS GA
Sbjct: 327  MPWENTCFVTGGSDHAVILWSEQDD-EKWKPKALHRNLHSSAVMGVAGMQHKQMVLSVGA 385

Query: 733  DKRIVGFDVMAGRADFKHQIECKCMSVLPNPSDFNLFMVQTGAHERQLRLFDIRLRQTEI 912
            D+RI G+DV AGRADFKHQ++ KCMSVLPNPSDFNLFMVQTG HERQLRLFDIRLR TE+
Sbjct: 386  DRRIFGYDVRAGRADFKHQVDSKCMSVLPNPSDFNLFMVQTGTHERQLRLFDIRLRNTEL 445

Query: 913  HSFGWKQESSESQSALINQAWSPDGLYITSGSADPMIHVFDIRYNSHRPSQSVKAHNKRV 1092
            H+FGWKQESS+SQSALINQAWSPDGLYITSGSADP+IH+FDIRY +H+PSQS++ H KRV
Sbjct: 446  HAFGWKQESSDSQSALINQAWSPDGLYITSGSADPVIHIFDIRYTAHKPSQSIRVHQKRV 505

Query: 1093 FKAVWLQSLPLLVSISSDLNVGLHKI 1170
            F+A+WLQS+PL++SISSDLN+GLHK+
Sbjct: 506  FRAMWLQSIPLVISISSDLNIGLHKV 531


>ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798141 [Glycine max]
          Length = 1494

 Score =  592 bits (1527), Expect = e-167
 Identities = 280/386 (72%), Positives = 327/386 (84%)
 Frame = +1

Query: 13   TNSNGVTKIKGESSYRPSDDLEVIEVQDKGTKRKFEEKEHKELISLIRSSSSPHTIRCQN 192
            T  +   K     S R S + +  EV++KGTKRKFE+K HKELI L+R SSSP  + CQ 
Sbjct: 147  TGGSSRGKSDKSQSNRLSSEQQKTEVKEKGTKRKFEQKGHKELIPLVRKSSSPSLVTCQT 206

Query: 193  GVLISSQHKRKLRSLALCPTNDQLFVTSALDGIVNLWEVQAKGSGASLLSSTECMSTKQR 372
               ISSQHKRKLRS+ALCP NDQLFVTSALDG+VN W+VQAKG+GAS LS+T+C S KQR
Sbjct: 207  SNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVNFWQVQAKGAGASRLSTTDCASQKQR 266

Query: 373  RWPEDITWHPHGDKLFSVYTADGGDSQISIMNLNTTQKGKRVMYLEESPHVKGIINNIVF 552
            RWPED+ WHP G+ LFSVY+ADGGDSQ+SI NLN  Q G+RV +LE+ PHVKGIIN IVF
Sbjct: 267  RWPEDLAWHPEGNSLFSVYSADGGDSQVSITNLNKGQGGERVKFLEDKPHVKGIINGIVF 326

Query: 553  MPWEDLCFVTGGSDHAVVFWNEKNGGSSWKCKALHRNLHSSAVMGVAGLQQKNIVLSAGA 732
            MPWE+ CFVTGGSDHAV+ WNE++    WK KALHRNLHSSAVMGVAG+QQK +VLS GA
Sbjct: 327  MPWENTCFVTGGSDHAVILWNEQDD-EKWKPKALHRNLHSSAVMGVAGMQQKQMVLSVGA 385

Query: 733  DKRIVGFDVMAGRADFKHQIECKCMSVLPNPSDFNLFMVQTGAHERQLRLFDIRLRQTEI 912
            D+RI G+DV  GRADFKHQ++ KCMSVLPNPSDFNLFMVQTG HERQLRLFDIRLR TE+
Sbjct: 386  DRRIFGYDVRVGRADFKHQVDSKCMSVLPNPSDFNLFMVQTGTHERQLRLFDIRLRNTEL 445

Query: 913  HSFGWKQESSESQSALINQAWSPDGLYITSGSADPMIHVFDIRYNSHRPSQSVKAHNKRV 1092
            H+FGWKQESS+SQSALINQAWSPDG YITSGSADP+IH+FDIRY +H+PSQS++AH KRV
Sbjct: 446  HAFGWKQESSDSQSALINQAWSPDGHYITSGSADPVIHIFDIRYTAHKPSQSIRAHQKRV 505

Query: 1093 FKAVWLQSLPLLVSISSDLNVGLHKI 1170
            F+A+WLQS+PL++SISSDLN+GLHK+
Sbjct: 506  FRAMWLQSIPLVISISSDLNIGLHKV 531


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