BLASTX nr result

ID: Coptis25_contig00006489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006489
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83570.1| hypothetical protein VITISV_041707 [Vitis vinifera]   257   4e-66
ref|XP_002282225.1| PREDICTED: GATA transcription factor 9-like ...   256   1e-65
ref|XP_003548758.1| PREDICTED: GATA transcription factor 9-like ...   235   1e-59
ref|XP_002319169.1| predicted protein [Populus trichocarpa] gi|2...   234   3e-59
ref|XP_003619010.1| GATA transcription factor [Medicago truncatu...   171   3e-40

>emb|CAN83570.1| hypothetical protein VITISV_041707 [Vitis vinifera]
          Length = 620

 Score =  257 bits (657), Expect = 4e-66
 Identities = 157/309 (50%), Positives = 179/309 (57%)
 Frame = -2

Query: 1048 VMDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXSLDDLFPIQNTEGDVSLEWL 869
            VMDF R VSVSG    EY  EQV S   SKL G        LDDLF  QNTE DVSLEWL
Sbjct: 321  VMDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWL 373

Query: 868  SAFVEDCLSSSGNCIAAAPVISHEQIXXXXXXXXXXXXPSEKTLTSQVPSPFQEFSIPGK 689
            S FVEDCLSS+GNC+ A   ++ +               S +    +  SP Q   IPGK
Sbjct: 374  SIFVEDCLSSTGNCLPAPKNVASDS----ATPKPSKPLQSMQKPQQKPSSPLQNLVIPGK 429

Query: 688  ARTKRKRSPTNPTTKLSTTFSHLHTKNQPSFHHVISSDPPLLHQEYWLADSELINVPKKM 509
            AR+KRKR+ T  TT  S    HL+ +NQ    H+ SSDPPLL Q YWLADSELI VPKK 
Sbjct: 430  ARSKRKRA-TTITTSFSNWVHHLNPENQNL--HITSSDPPLLQQAYWLADSELI-VPKKE 485

Query: 508  KEDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKMIMXXXXXXXXXXXXXXXX 329
            +  S+                                   ++ +                
Sbjct: 486  ESSSN---NNNNNNSMVKEEEEVEEEEEEEEEEEETREEVEVEVEKGNKERWGNLEGSNG 542

Query: 328  QPRRCTHCLSQKTPQWRAGPLGPKTLCNACGVRFKSGRLLPEYRPAKSPTFVSYMHSNSH 149
            QPRRCTHCL+Q+TPQWRAGPLGPKTLCNACGVR+KSGRLLPEYRPAKSPTFVSY HSNSH
Sbjct: 543  QPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYKHSNSH 602

Query: 148  KKVLEMRMS 122
            KKV+EMRM+
Sbjct: 603  KKVMEMRMA 611


>ref|XP_002282225.1| PREDICTED: GATA transcription factor 9-like [Vitis vinifera]
          Length = 299

 Score =  256 bits (653), Expect = 1e-65
 Identities = 156/308 (50%), Positives = 178/308 (57%)
 Frame = -2

Query: 1045 MDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXSLDDLFPIQNTEGDVSLEWLS 866
            MDF R VSVSG    EY  EQV S   SKL G        LDDLF  QNTE DVSLEWLS
Sbjct: 1    MDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWLS 53

Query: 865  AFVEDCLSSSGNCIAAAPVISHEQIXXXXXXXXXXXXPSEKTLTSQVPSPFQEFSIPGKA 686
             FVEDCLSS+GNC+ A   ++ +               S +    +  SP Q   IPGKA
Sbjct: 54   IFVEDCLSSTGNCLPAPKNVASDS----ATPKPSKPLQSMQKPQQKPSSPLQNLVIPGKA 109

Query: 685  RTKRKRSPTNPTTKLSTTFSHLHTKNQPSFHHVISSDPPLLHQEYWLADSELINVPKKMK 506
            R+KRKR+ T  TT  S    HL+ +NQ    H+ SSDPPLL Q YWLADSELI VPKK +
Sbjct: 110  RSKRKRA-TTITTSFSNWVHHLNPENQNL--HITSSDPPLLQQAYWLADSELI-VPKKEE 165

Query: 505  EDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKMIMXXXXXXXXXXXXXXXXQ 326
              S+                                   ++ +                Q
Sbjct: 166  SSSN---NNNNNNSMVKEEEEVEEEEEEEEEEEETREEVEVEVEKGNKERWGNLEGSNGQ 222

Query: 325  PRRCTHCLSQKTPQWRAGPLGPKTLCNACGVRFKSGRLLPEYRPAKSPTFVSYMHSNSHK 146
            PRRCTHCL+Q+TPQWRAGPLGPKTLCNACGVR+KSGRLLPEYRPAKSPTFVSY HSNSHK
Sbjct: 223  PRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYKHSNSHK 282

Query: 145  KVLEMRMS 122
            KV+EMRM+
Sbjct: 283  KVMEMRMA 290


>ref|XP_003548758.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 281

 Score =  235 bits (600), Expect = 1e-59
 Identities = 146/310 (47%), Positives = 165/310 (53%), Gaps = 2/310 (0%)
 Frame = -2

Query: 1045 MDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXSLDDLFPIQNTEGDVSLEWLS 866
            MD C+NVSVSG    E Q  QV +P+ S           SLDDLF  QNTE DV LEWLS
Sbjct: 3    MDMCQNVSVSG----ECQQVQVFAPSCSS----------SLDDLFSAQNTEVDVELEWLS 48

Query: 865  AFVEDCLSSSGNCIAAAPVISHEQIXXXXXXXXXXXXPSEKTLTSQVPSPFQEFSIPGKA 686
             FVEDC SS  +C+     +                  S K    Q   P Q F++PGKA
Sbjct: 49   EFVEDCFSSPPSCVLVPVGVKTTSTKSTSTSINP----SLKRPQQQNEPPLQNFAVPGKA 104

Query: 685  RTKRKRSPTNPTTK--LSTTFSHLHTKNQPSFHHVISSDPPLLHQEYWLADSELINVPKK 512
            R+KRKR     T K  LS    HL+ +N+      + SDPPLL Q YWLADSELI    K
Sbjct: 105  RSKRKRLSAPRTNKDPLSIWSHHLNPQNE-----ALCSDPPLLKQAYWLADSELIMPKPK 159

Query: 511  MKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKMIMXXXXXXXXXXXXXXX 332
             KE+                                     K I                
Sbjct: 160  DKEEQQEEVVIMAKEDEEKVIINVS----------------KEISFGDSELDEGSNGQQQ 203

Query: 331  XQPRRCTHCLSQKTPQWRAGPLGPKTLCNACGVRFKSGRLLPEYRPAKSPTFVSYMHSNS 152
              PRRCTHCL+Q+TPQWRAGPLGPKTLCNACGVR+KSGRLLPEYRPAKSPTFVSY+HSNS
Sbjct: 204  PMPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNS 263

Query: 151  HKKVLEMRMS 122
            HKKV+EMRMS
Sbjct: 264  HKKVMEMRMS 273


>ref|XP_002319169.1| predicted protein [Populus trichocarpa] gi|222857545|gb|EEE95092.1|
            predicted protein [Populus trichocarpa]
          Length = 295

 Score =  234 bits (597), Expect = 3e-59
 Identities = 144/314 (45%), Positives = 179/314 (57%), Gaps = 6/314 (1%)
 Frame = -2

Query: 1045 MDFCRNVSVSGGLPSEY-QPEQVIS--PAYSKLNGXXXXXXXS---LDDLFPIQNTEGDV 884
            MDFCRNV+VS    +EY Q E+V++  P  SKL         +   LDD F  QNTE D 
Sbjct: 1    MDFCRNVTVS----TEYHQQEKVLASPPPCSKLGAAAAALTATTSPLDDPFSAQNTEVDF 56

Query: 883  SLEWLSAFVEDCLSSSGNCIAAAPVISHEQIXXXXXXXXXXXXPSEKTLTSQVPSPFQEF 704
            S EWLS FVEDCLSS+GNC+ A  V + +                 K    + PS  ++ 
Sbjct: 57   SSEWLSVFVEDCLSSTGNCLPAPTVEAQKP----NTEENPPKNWQRKPQDQEDPSSLKKL 112

Query: 703  SIPGKARTKRKRSPTNPTTKLSTTFSHLHTKNQPSFHHVISSDPPLLHQEYWLADSELIN 524
             IPGK+R+KR+R P + T    T++ + +     +F+++ SSDPPLL Q YWLADSELI 
Sbjct: 113  VIPGKSRSKRRRLPGDKTRNPLTSWCYTNQ----AFNNLTSSDPPLLQQTYWLADSELI- 167

Query: 523  VPKKMKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKMIMXXXXXXXXXXX 344
                +KEDS+                                  + +             
Sbjct: 168  --MPIKEDSNNTDMDNEVQEESGVGVHDEDIGKVVAVVGSNGSKDSL--------GVLES 217

Query: 343  XXXXXQPRRCTHCLSQKTPQWRAGPLGPKTLCNACGVRFKSGRLLPEYRPAKSPTFVSYM 164
                 QPRRCTHCL+Q+TPQWRAGPLGPKTLCNACGVR+KSGRLLPEYRPAKSPTFVSY+
Sbjct: 218  NNGQQQPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYL 277

Query: 163  HSNSHKKVLEMRMS 122
            HSNSHKKV+EMRM+
Sbjct: 278  HSNSHKKVMEMRMA 291


>ref|XP_003619010.1| GATA transcription factor [Medicago truncatula]
           gi|355494025|gb|AES75228.1| GATA transcription factor
           [Medicago truncatula]
          Length = 217

 Score =  171 bits (433), Expect = 3e-40
 Identities = 101/204 (49%), Positives = 117/204 (57%)
 Frame = -2

Query: 730 QVPSPFQEFSIPGKARTKRKRSPTNPTTKLSTTFSHLHTKNQPSFHHVISSDPPLLHQEY 551
           Q  S  Q F +PGKAR+KRKR    P+T +   +SH H  +  +    + SDPPLL Q Y
Sbjct: 36  QNQSYLQNFVVPGKARSKRKRLSA-PSTNI---WSHSHLISDGN----LISDPPLLKQAY 87

Query: 550 WLADSELINVPKKMKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKMIMXX 371
           WLADSELI  PK  ++ S+                                    +I   
Sbjct: 88  WLADSELI-APKNEQKVSAVAYGDQKEAKRRVKKESYEVG---------------IIQVK 131

Query: 370 XXXXXXXXXXXXXXQPRRCTHCLSQKTPQWRAGPLGPKTLCNACGVRFKSGRLLPEYRPA 191
                           RRCTHCLSQ+TPQWRAGPLGPKTLCNACGVR+KSGRLLPEYRPA
Sbjct: 132 NSENVNDDDEEHIPNARRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPA 191

Query: 190 KSPTFVSYMHSNSHKKVLEMRMST 119
           KSPTFVSY+HSNSHKKVLEMRM +
Sbjct: 192 KSPTFVSYLHSNSHKKVLEMRMQS 215


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