BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006487
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   444   e-123
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...   444   e-123
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   442   e-122
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   439   e-121
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   439   e-121

>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1197

 Score =  444 bits (1142), Expect = e-123
 Identities = 220/227 (96%), Positives = 226/227 (99%)
 Frame = +3

Query: 3    REQQQ*TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKTLTF 182
            REQQQ TMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDAYGKT+TF
Sbjct: 470  REQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITF 529

Query: 183  GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 362
            GQRSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR
Sbjct: 530  GQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 589

Query: 363  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREI 542
            GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREI
Sbjct: 590  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 649

Query: 543  LIDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVQRRPELRLIVTS 683
            L+DENLSQYSVIMLDEAHERTIHTDVLFGLLKQLV+RRPELRLIVTS
Sbjct: 650  LVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTS 696


>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1203

 Score =  444 bits (1142), Expect = e-123
 Identities = 220/227 (96%), Positives = 226/227 (99%)
 Frame = +3

Query: 3    REQQQ*TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKTLTF 182
            REQQQ TMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDAYGKT+TF
Sbjct: 476  REQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITF 535

Query: 183  GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 362
            GQRSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR
Sbjct: 536  GQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 595

Query: 363  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREI 542
            GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREI
Sbjct: 596  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 655

Query: 543  LIDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVQRRPELRLIVTS 683
            L+DENLSQYSVIMLDEAHERTIHTDVLFGLLKQLV+RRPELRLIVTS
Sbjct: 656  LVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTS 702


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  442 bits (1138), Expect = e-122
 Identities = 221/227 (97%), Positives = 225/227 (99%)
 Frame = +3

Query: 3    REQQQ*TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKTLTF 182
            REQQQ TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK LTF
Sbjct: 450  REQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTF 509

Query: 183  GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 362
            GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR
Sbjct: 510  GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 569

Query: 363  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREI 542
            GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREI
Sbjct: 570  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 629

Query: 543  LIDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVQRRPELRLIVTS 683
            LIDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLV+RRP+LRLIVTS
Sbjct: 630  LIDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTS 676


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  439 bits (1130), Expect = e-121
 Identities = 219/227 (96%), Positives = 224/227 (98%)
 Frame = +3

Query: 3    REQQQ*TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKTLTF 182
            REQQQ TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK LTF
Sbjct: 445  REQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTF 504

Query: 183  GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 362
            GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR
Sbjct: 505  GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 564

Query: 363  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREI 542
            GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREI
Sbjct: 565  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 624

Query: 543  LIDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVQRRPELRLIVTS 683
            LID+NLSQYSVIMLDEAHERTIHTDVLFGLLK LV+RRP+LRLIVTS
Sbjct: 625  LIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKHLVKRRPDLRLIVTS 671


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  439 bits (1130), Expect = e-121
 Identities = 219/227 (96%), Positives = 224/227 (98%)
 Frame = +3

Query: 3    REQQQ*TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKTLTF 182
            REQQQ TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK LTF
Sbjct: 448  REQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTF 507

Query: 183  GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 362
            GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR
Sbjct: 508  GQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 567

Query: 363  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREI 542
            GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREI
Sbjct: 568  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 627

Query: 543  LIDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVQRRPELRLIVTS 683
            LID+NLSQYSVIMLDEAHERTIHTDVLFGLLK LV+RRP+LRLIVTS
Sbjct: 628  LIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKHLVKRRPDLRLIVTS 674