BLASTX nr result

ID: Coptis25_contig00006485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006485
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG56413.1| MDR-like ABC transporter [Catharanthus roseus]         204   1e-50
ref|XP_004155533.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   202   4e-50
ref|XP_004134559.1| PREDICTED: ABC transporter B family member 9...   202   4e-50
ref|XP_002870073.1| P-glycoprotein 9 [Arabidopsis lyrata subsp. ...   202   7e-50
ref|NP_193539.6| P-glycoprotein 9 [Arabidopsis thaliana] gi|3784...   202   7e-50

>gb|ABG56413.1| MDR-like ABC transporter [Catharanthus roseus]
          Length = 1266

 Score =  204 bits (520), Expect = 1e-50
 Identities = 103/125 (82%), Positives = 116/125 (92%)
 Frame = -2

Query: 650  HSFISGLPNGYNTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDSESERLV 471
            HSFIS LPNGY+TSVGERGVQLSGGQKQRIAIARAILKDP+ILLLDEATSALD+ESER+V
Sbjct: 1142 HSFISSLPNGYDTSVGERGVQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIV 1201

Query: 470  QDALDEVMINRTTIVVAHRLSAIKGADTIAVVKNGLITENGSHEELMKIDEGAYASLVSL 291
            QDALD+VM+NRTT+VVAHRLS IKGAD IAVVKNG+I+E G H+ELMK++ G YASLVSL
Sbjct: 1202 QDALDKVMVNRTTVVVAHRLSTIKGADVIAVVKNGVISEKGRHDELMKMENGVYASLVSL 1261

Query: 290  HMSAS 276
              SA+
Sbjct: 1262 QSSAA 1266



 Score =  159 bits (401), Expect = 7e-37
 Identities = 81/122 (66%), Positives = 97/122 (79%)
 Frame = -2

Query: 644 FISGLPNGYNTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDSESERLVQD 465
           FI  LP G +T VGE G QLSGGQKQRIAIARAILK+P+ILLLDEATSALD+ESER+VQD
Sbjct: 482 FIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQD 541

Query: 464 ALDEVMINRTTIVVAHRLSAIKGADTIAVVKNGLITENGSHEELMKIDEGAYASLVSLHM 285
           ALD VM NRTT+VVAHRLS I+ A  IAVV++G + E G+H EL+K   GAY+ L+ +  
Sbjct: 542 ALDNVMSNRTTVVVAHRLSTIRNAHLIAVVQSGKLVEQGTHAELIKDPNGAYSQLIRMQQ 601

Query: 284 SA 279
            +
Sbjct: 602 GS 603


>ref|XP_004155533.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
            9-like [Cucumis sativus]
          Length = 1268

 Score =  202 bits (515), Expect = 4e-50
 Identities = 102/125 (81%), Positives = 115/125 (92%)
 Frame = -2

Query: 650  HSFISGLPNGYNTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDSESERLV 471
            H+FIS LP GY TSVGERGVQLSGGQKQRIAIARAILK+PKILLLDEATSALD+ESER+V
Sbjct: 1142 HNFISSLPEGYETSVGERGVQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERVV 1201

Query: 470  QDALDEVMINRTTIVVAHRLSAIKGADTIAVVKNGLITENGSHEELMKIDEGAYASLVSL 291
            QDALD VM+NRTT+VVAHRL+ I+GAD IAVVKNG+I E GSHEELMKI +GAYASLV+L
Sbjct: 1202 QDALDRVMVNRTTVVVAHRLTTIRGADIIAVVKNGVIAEKGSHEELMKISDGAYASLVAL 1261

Query: 290  HMSAS 276
            H ++S
Sbjct: 1262 HSTSS 1266



 Score =  156 bits (394), Expect = 4e-36
 Identities = 80/118 (67%), Positives = 96/118 (81%)
 Frame = -2

Query: 644 FISGLPNGYNTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDSESERLVQD 465
           FI  LP G +T VGE G QLSGGQKQRIAI+RAILK+P+ILLLDEATSALDSESER+VQ+
Sbjct: 484 FIDKLPKGLDTMVGEHGTQLSGGQKQRIAISRAILKNPRILLLDEATSALDSESERIVQE 543

Query: 464 ALDEVMINRTTIVVAHRLSAIKGADTIAVVKNGLITENGSHEELMKIDEGAYASLVSL 291
           AL  VM NRTT+VVAHRL+ I+ +D IAVV  G + E G+H+EL+K  +GAY+ LV L
Sbjct: 544 ALVRVMANRTTVVVAHRLTTIRNSDNIAVVHQGKLLEQGTHDELIKNPDGAYSQLVRL 601


>ref|XP_004134559.1| PREDICTED: ABC transporter B family member 9-like [Cucumis sativus]
          Length = 1270

 Score =  202 bits (515), Expect = 4e-50
 Identities = 102/125 (81%), Positives = 115/125 (92%)
 Frame = -2

Query: 650  HSFISGLPNGYNTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDSESERLV 471
            H+FIS LP GY TSVGERGVQLSGGQKQRIAIARAILK+PKILLLDEATSALD+ESER+V
Sbjct: 1144 HNFISSLPEGYETSVGERGVQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERVV 1203

Query: 470  QDALDEVMINRTTIVVAHRLSAIKGADTIAVVKNGLITENGSHEELMKIDEGAYASLVSL 291
            QDALD VM+NRTT+VVAHRL+ I+GAD IAVVKNG+I E GSHEELMKI +GAYASLV+L
Sbjct: 1204 QDALDRVMVNRTTVVVAHRLTTIRGADIIAVVKNGVIAEKGSHEELMKISDGAYASLVAL 1263

Query: 290  HMSAS 276
            H ++S
Sbjct: 1264 HSTSS 1268



 Score =  156 bits (394), Expect = 4e-36
 Identities = 80/118 (67%), Positives = 96/118 (81%)
 Frame = -2

Query: 644 FISGLPNGYNTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDSESERLVQD 465
           FI  LP G +T VGE G QLSGGQKQRIAI+RAILK+P+ILLLDEATSALDSESER+VQ+
Sbjct: 484 FIDKLPKGLDTMVGEHGTQLSGGQKQRIAISRAILKNPRILLLDEATSALDSESERIVQE 543

Query: 464 ALDEVMINRTTIVVAHRLSAIKGADTIAVVKNGLITENGSHEELMKIDEGAYASLVSL 291
           AL  VM NRTT+VVAHRL+ I+ +D IAVV  G + E G+H+EL+K  +GAY+ LV L
Sbjct: 544 ALVRVMANRTTVVVAHRLTTIRNSDNIAVVHQGKLLEQGTHDELIKNPDGAYSQLVRL 601


>ref|XP_002870073.1| P-glycoprotein 9 [Arabidopsis lyrata subsp. lyrata]
            gi|297315909|gb|EFH46332.1| P-glycoprotein 9 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1239

 Score =  202 bits (513), Expect = 7e-50
 Identities = 103/125 (82%), Positives = 113/125 (90%)
 Frame = -2

Query: 650  HSFISGLPNGYNTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDSESERLV 471
            H+FIS LP GY+TSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALD+ESER+V
Sbjct: 1115 HNFISSLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVV 1174

Query: 470  QDALDEVMINRTTIVVAHRLSAIKGADTIAVVKNGLITENGSHEELMKIDEGAYASLVSL 291
            QDALD VM+NRTT+VVAHRL+ IK AD IAVVKNG+I E G HE LMKI  GAYASLV+L
Sbjct: 1175 QDALDRVMVNRTTVVVAHRLTTIKNADVIAVVKNGVIAEKGRHETLMKISGGAYASLVTL 1234

Query: 290  HMSAS 276
            HMSA+
Sbjct: 1235 HMSAN 1239



 Score =  155 bits (391), Expect = 1e-35
 Identities = 79/118 (66%), Positives = 96/118 (81%)
 Frame = -2

Query: 644 FISGLPNGYNTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDSESERLVQD 465
           FI  LP G +T VGE G Q+SGGQKQR+AIARAILK+PKILLLDEATSALD+ESER+VQD
Sbjct: 475 FIDKLPQGLDTMVGEHGTQMSGGQKQRLAIARAILKNPKILLLDEATSALDAESERIVQD 534

Query: 464 ALDEVMINRTTIVVAHRLSAIKGADTIAVVKNGLITENGSHEELMKIDEGAYASLVSL 291
           AL  +M NRTT+VVAHRL+ I+ AD IAVV  G I E G+H+++++  EGAY+ LV L
Sbjct: 535 ALVNLMSNRTTVVVAHRLTTIRTADVIAVVHQGKIVEKGTHDDMIQNPEGAYSQLVRL 592


>ref|NP_193539.6| P-glycoprotein 9 [Arabidopsis thaliana]
            gi|378405145|sp|Q9M0M2.2|AB9B_ARATH RecName: Full=ABC
            transporter B family member 9; Short=ABC transporter
            ABCB.9; Short=AtABCB9; AltName: Full=Multidrug resistance
            protein 9; AltName: Full=P-glycoprotein 9
            gi|332658588|gb|AEE83988.1| P-glycoprotein 9 [Arabidopsis
            thaliana]
          Length = 1236

 Score =  202 bits (513), Expect = 7e-50
 Identities = 103/125 (82%), Positives = 113/125 (90%)
 Frame = -2

Query: 650  HSFISGLPNGYNTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDSESERLV 471
            H+FIS LP GY+TSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALD+ESER+V
Sbjct: 1112 HNFISSLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVV 1171

Query: 470  QDALDEVMINRTTIVVAHRLSAIKGADTIAVVKNGLITENGSHEELMKIDEGAYASLVSL 291
            QDALD VM+NRTT+VVAHRL+ IK AD IAVVKNG+I E G HE LMKI  GAYASLV+L
Sbjct: 1172 QDALDRVMVNRTTVVVAHRLTTIKNADVIAVVKNGVIAEKGRHETLMKISGGAYASLVTL 1231

Query: 290  HMSAS 276
            HMSA+
Sbjct: 1232 HMSAN 1236



 Score =  156 bits (394), Expect = 4e-36
 Identities = 80/118 (67%), Positives = 96/118 (81%)
 Frame = -2

Query: 644 FISGLPNGYNTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDSESERLVQD 465
           FI  LP G +T VGE G Q+SGGQKQR+AIARAILK+PKILLLDEATSALD+ESER+VQD
Sbjct: 475 FIDKLPQGLDTMVGEHGTQMSGGQKQRLAIARAILKNPKILLLDEATSALDAESERIVQD 534

Query: 464 ALDEVMINRTTIVVAHRLSAIKGADTIAVVKNGLITENGSHEELMKIDEGAYASLVSL 291
           AL  +M NRTT+VVAHRL+ I+ AD IAVV  G I E G+H+E+++  EGAY+ LV L
Sbjct: 535 ALVNLMSNRTTVVVAHRLTTIRTADVIAVVHQGKIVEKGTHDEMIQDPEGAYSQLVRL 592


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