BLASTX nr result

ID: Coptis25_contig00006482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006482
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-62
ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-li...   241   4e-62
emb|CBI39009.3| unnamed protein product [Vitis vinifera]              241   4e-62
ref|XP_002271444.1| PREDICTED: GDP-mannose transporter GONST3-li...   241   4e-62
gb|ACD56609.1| putative integral membrane protein [Gossypioides ...   241   6e-62

>ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|222863584|gb|EEF00715.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  242 bits (618), Expect = 2e-62
 Identities = 118/137 (86%), Positives = 127/137 (92%)
 Frame = -1

Query: 412 IAAGYCILASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHD*LDFLTM 233
           IAAGYCI ASLLSIINKWA+MKFPYPGALTALQYFTSAAGVL+ G  K+LEHD LD LTM
Sbjct: 43  IAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLVCGWCKVLEHDSLDLLTM 102

Query: 232 WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLRQPWPSIRTWLS 53
           WRFLPAA++FYLSLFTNSELLLHANVDTFIVFRS VPIFVA+GE L+L QPWPS++TWLS
Sbjct: 103 WRFLPAAIMFYLSLFTNSELLLHANVDTFIVFRSLVPIFVAIGETLFLHQPWPSLKTWLS 162

Query: 52  LSTIFSGSVLYVLTDYQ 2
           LSTIF GSVLYVLTDYQ
Sbjct: 163 LSTIFGGSVLYVLTDYQ 179


>ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-like [Glycine max]
          Length = 382

 Score =  241 bits (615), Expect = 4e-62
 Identities = 115/137 (83%), Positives = 128/137 (93%)
 Frame = -1

Query: 412 IAAGYCILASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHD*LDFLTM 233
           +AAGYC+ ASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFG+LK+LEHD LD +TM
Sbjct: 50  VAAGYCLSASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGRLKLLEHDPLDLMTM 109

Query: 232 WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLRQPWPSIRTWLS 53
           W+FLPAA+IFYLSLFTNSELLLHANVDTFIVFRS VP+FVA+GE L+L QPWPS +TW S
Sbjct: 110 WQFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSVVPLFVAVGETLFLHQPWPSGKTWAS 169

Query: 52  LSTIFSGSVLYVLTDYQ 2
           L TIF+GSVLYV+TDYQ
Sbjct: 170 LGTIFAGSVLYVVTDYQ 186


>emb|CBI39009.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  241 bits (615), Expect = 4e-62
 Identities = 118/137 (86%), Positives = 128/137 (93%)
 Frame = -1

Query: 412 IAAGYCILASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHD*LDFLTM 233
           IAAGYCI ASLLSIINKWAVMKFPYPGALTALQYFTSAAGV++ G  KI+EHD LD  TM
Sbjct: 57  IAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVVICGWFKIIEHDPLDRSTM 116

Query: 232 WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLRQPWPSIRTWLS 53
           WRFLPAA+IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA+GE LYL+QPWP+++TWLS
Sbjct: 117 WRFLPAAVIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLYLKQPWPTMKTWLS 176

Query: 52  LSTIFSGSVLYVLTDYQ 2
           L+TIF GSVLYVLTDYQ
Sbjct: 177 LATIFGGSVLYVLTDYQ 193


>ref|XP_002271444.1| PREDICTED: GDP-mannose transporter GONST3-like [Vitis vinifera]
          Length = 374

 Score =  241 bits (615), Expect = 4e-62
 Identities = 118/137 (86%), Positives = 128/137 (93%)
 Frame = -1

Query: 412 IAAGYCILASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHD*LDFLTM 233
           IAAGYCI ASLLSIINKWAVMKFPYPGALTALQYFTSAAGV++ G  KI+EHD LD  TM
Sbjct: 42  IAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVVICGWFKIIEHDPLDRSTM 101

Query: 232 WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLRQPWPSIRTWLS 53
           WRFLPAA+IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA+GE LYL+QPWP+++TWLS
Sbjct: 102 WRFLPAAVIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLYLKQPWPTMKTWLS 161

Query: 52  LSTIFSGSVLYVLTDYQ 2
           L+TIF GSVLYVLTDYQ
Sbjct: 162 LATIFGGSVLYVLTDYQ 178


>gb|ACD56609.1| putative integral membrane protein [Gossypioides kirkii]
          Length = 371

 Score =  241 bits (614), Expect = 6e-62
 Identities = 117/137 (85%), Positives = 126/137 (91%)
 Frame = -1

Query: 412 IAAGYCILASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHD*LDFLTM 233
           +AAGYCI ASLLSIINKWAVMKFPYPGALTALQY TSAAGV+L G  K+LEHD LD LTM
Sbjct: 39  VAAGYCISASLLSIINKWAVMKFPYPGALTALQYLTSAAGVVLCGWFKVLEHDRLDLLTM 98

Query: 232 WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLRQPWPSIRTWLS 53
           WRFLPAA+IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA+GE L+L QPWPS++TW+S
Sbjct: 99  WRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLSQPWPSLKTWIS 158

Query: 52  LSTIFSGSVLYVLTDYQ 2
           L TIF GSVLYVLTDYQ
Sbjct: 159 LGTIFGGSVLYVLTDYQ 175


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