BLASTX nr result

ID: Coptis25_contig00006481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006481
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|2...   233   9e-60
ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-li...   232   2e-59
ref|NP_177760.1| golgi nucleotide sugar transporter 3 [Arabidops...   232   3e-59
ref|XP_002889076.1| integral membrane family protein [Arabidopsi...   232   3e-59
ref|XP_003592258.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mann...   230   8e-59

>ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|222863584|gb|EEF00715.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  233 bits (595), Expect = 9e-60
 Identities = 114/130 (87%), Positives = 122/130 (93%)
 Frame = -1

Query: 390 IAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLHFLTM 211
           IAAGYCISASLLSIINKWA+MKFPYPGALTALQYFTSAAGVL+ G  K+LEHDSL  LTM
Sbjct: 43  IAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLVCGWCKVLEHDSLDLLTM 102

Query: 210 WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSGVPIFVAIGEALYLHQPWPSIRTWLS 31
           WRFLPAA++FYLSLFTNSELLLHANVDTFIVFRS VPIFVAIGE L+LHQPWPS++TWLS
Sbjct: 103 WRFLPAAIMFYLSLFTNSELLLHANVDTFIVFRSLVPIFVAIGETLFLHQPWPSLKTWLS 162

Query: 30  LSTIFAGSVL 1
           LSTIF GSVL
Sbjct: 163 LSTIFGGSVL 172


>ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-like [Glycine max]
          Length = 382

 Score =  232 bits (592), Expect = 2e-59
 Identities = 111/130 (85%), Positives = 122/130 (93%)
 Frame = -1

Query: 390 IAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLHFLTM 211
           +AAGYC+SASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFG+LK+LEHD L  +TM
Sbjct: 50  VAAGYCLSASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGRLKLLEHDPLDLMTM 109

Query: 210 WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSGVPIFVAIGEALYLHQPWPSIRTWLS 31
           W+FLPAA+IFYLSLFTNSELLLHANVDTFIVFRS VP+FVA+GE L+LHQPWPS +TW S
Sbjct: 110 WQFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSVVPLFVAVGETLFLHQPWPSGKTWAS 169

Query: 30  LSTIFAGSVL 1
           L TIFAGSVL
Sbjct: 170 LGTIFAGSVL 179


>ref|NP_177760.1| golgi nucleotide sugar transporter 3 [Arabidopsis thaliana]
           gi|75198562|sp|Q9S845.1|GONS3_ARATH RecName:
           Full=GDP-mannose transporter GONST3; AltName:
           Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3
           gi|6554485|gb|AAF16667.1|AC012394_16 unknown protein;
           69155-70273 [Arabidopsis thaliana]
           gi|6573714|gb|AAF17634.1|AC009978_10 T23E18.26
           [Arabidopsis thaliana] gi|29329821|emb|CAD83087.1|
           GONST3 Golgi Nucleotide sugar transporter [Arabidopsis
           thaliana] gi|332197705|gb|AEE35826.1| golgi nucleotide
           sugar transporter 3 [Arabidopsis thaliana]
          Length = 372

 Score =  232 bits (591), Expect = 3e-59
 Identities = 109/130 (83%), Positives = 123/130 (94%)
 Frame = -1

Query: 390 IAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLHFLTM 211
           +AAGYC+SASLLSIINKWA+MKFPYPGALTA+QYFTSAAGVLL  ++K++EHDSL+ LTM
Sbjct: 38  VAAGYCLSASLLSIINKWAIMKFPYPGALTAMQYFTSAAGVLLCAQMKLIEHDSLNLLTM 97

Query: 210 WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSGVPIFVAIGEALYLHQPWPSIRTWLS 31
           WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRS VPIFVAIGE L+LHQPWPS++TW S
Sbjct: 98  WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWGS 157

Query: 30  LSTIFAGSVL 1
           L+TIF GS+L
Sbjct: 158 LATIFGGSLL 167


>ref|XP_002889076.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334917|gb|EFH65335.1| integral membrane family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 372

 Score =  232 bits (591), Expect = 3e-59
 Identities = 109/130 (83%), Positives = 122/130 (93%)
 Frame = -1

Query: 390 IAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLHFLTM 211
           +AAGYC+SASLLSIINKWA+MKFPYPGALTA+QYFTSAAGV L  ++K++EHDSL+ LTM
Sbjct: 38  VAAGYCLSASLLSIINKWAIMKFPYPGALTAMQYFTSAAGVFLCAQMKLIEHDSLNLLTM 97

Query: 210 WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSGVPIFVAIGEALYLHQPWPSIRTWLS 31
           WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRS VPIFVAIGE LYLHQPWPS++TW S
Sbjct: 98  WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLYLHQPWPSVKTWGS 157

Query: 30  LSTIFAGSVL 1
           L+TIF GS+L
Sbjct: 158 LATIFGGSLL 167


>ref|XP_003592258.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
           [Medicago truncatula] gi|355481306|gb|AES62509.1|
           UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose
           transporter [Medicago truncatula]
          Length = 404

 Score =  230 bits (587), Expect = 8e-59
 Identities = 109/130 (83%), Positives = 122/130 (93%)
 Frame = -1

Query: 390 IAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLHFLTM 211
           +AAGYC+SASLLSIINKWA+MKFPYPGALTALQYFTSAAGVLL G LK++EHD L  +TM
Sbjct: 73  VAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGWLKVVEHDKLDLMTM 132

Query: 210 WRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSGVPIFVAIGEALYLHQPWPSIRTWLS 31
           WRFLPAA+IFYLSLFTNSELLLHANVDTFIVFRS VPIFVAIGE+++LH+PWPS++TW S
Sbjct: 133 WRFLPAAVIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGESVFLHRPWPSLKTWAS 192

Query: 30  LSTIFAGSVL 1
           L TIFAGSVL
Sbjct: 193 LGTIFAGSVL 202


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