BLASTX nr result

ID: Coptis25_contig00006463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006463
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533358.1| PREDICTED: probable receptor-like protein ki...    68   1e-09
ref|XP_002316043.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus c...    62   4e-08
ref|XP_002321485.1| predicted protein [Populus trichocarpa] gi|2...    61   9e-08
ref|XP_002321488.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-07

>ref|XP_003533358.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Glycine max]
          Length = 835

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
 Frame = +3

Query: 237 CPYGYAIQYPF--NYEDRNFRRRWGEGYPGLMIKCLDNRPFINISNHLYLVQEIRYDVQM 410
           C  G  I+YPF   YE   F      GYP   I C+D  P +  SN+ +LV++I Y    
Sbjct: 255 CGTGPPIKYPFWIPYEQEPFC-----GYPHFEITCMDKNPILRTSNYEFLVKDIYYSNSS 309

Query: 411 VTIVDADIERQDCPQPRRNFSLSDSTPYLRSNYLANVIFFYN 536
            T+ D D+    CP P  N++  D TP+  S+   N+ FFYN
Sbjct: 310 FTVADIDVYEDKCPVPLYNYTF-DQTPFTYSSENWNLSFFYN 350


>ref|XP_002316043.1| predicted protein [Populus trichocarpa] gi|222865083|gb|EEF02214.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
 Frame = +3

Query: 246 GYAIQYPFNYEDRNFRRRWGEGYPGLMIKCLDNRPFINISNHLYLVQEIRYDVQMVTIVD 425
           G  I YPF ++ + F      GYPG  I C D  P I +SN LY +  I +  + +T+  
Sbjct: 42  GITISYPFWHQSQQFEHC---GYPGFNISCSDQNPMIYLSNDLYPITNINHSSKSLTLHH 98

Query: 426 ADIERQDCPQPRRNFSLSDSTPYLRSNYLANVI--FFYN 536
             I R DCP+   +    +STP L ++ L N +  FFYN
Sbjct: 99  TKIRRADCPKAPHDTITVNSTPSLFNSTLGNKMLHFFYN 137


>ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus communis]
           gi|223535865|gb|EEF37526.1| hypothetical protein
           RCOM_0725500 [Ricinus communis]
          Length = 257

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = +3

Query: 237 CPYGYAIQYPFNYEDRNFRRRWGEGYPGLMIKCL-DNRPFINISNHLYLVQEIRYDVQMV 413
           C  G  I+YPF Y++ +   ++  GYP L + C  D+ P + + N  Y V+ I Y    +
Sbjct: 39  CGNGVTIKYPFWYKNNSTPDQYC-GYPKLGLSCSNDDEPVLGLPNDSYYVKNINYTDSTI 97

Query: 414 TIVDADIERQDCPQPRRNFSLSDSTPYLRSNYLANVIFFYN 536
           T+VD D+  Q CP+ R N +L D+ P   ++   N+ F++N
Sbjct: 98  TLVDIDVVGQTCPRARHNLTL-DNLPLNYTDLNLNLSFYFN 137


>ref|XP_002321485.1| predicted protein [Populus trichocarpa] gi|222868481|gb|EEF05612.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
 Frame = +3

Query: 237 CPYGYAIQYPF--NYEDRNFRRRWGEGYPGLMIKCLDNRPFINISNHLYLVQEIRYDVQM 410
           C  G  I YPF  + E   F      G+P  M+ C D RP + ISN +Y++++I Y    
Sbjct: 44  CGAGPNISYPFWLSQEQEPFC-----GHPNFMLTCSDKRPALTISNDVYIIKDISYATNS 98

Query: 411 VTIVDADIERQDCPQPRRNFSLSDSTPYLRSNYLANVIFFYN 536
           + + +A +  + CP    N SL D TP   S    N  FFYN
Sbjct: 99  MRVANAAVYEETCPPLLHNISL-DRTPLTISPGYTNFSFFYN 139


>ref|XP_002321488.1| predicted protein [Populus trichocarpa] gi|222868484|gb|EEF05615.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 28/76 (36%), Positives = 41/76 (53%)
 Frame = +3

Query: 309 GYPGLMIKCLDNRPFINISNHLYLVQEIRYDVQMVTIVDADIERQDCPQPRRNFSLSDST 488
           G+P  M+ C D RP + ISN +Y++++I Y    + + +A +  + CP    N SL D T
Sbjct: 65  GHPNFMLTCSDKRPALTISNDVYIIKDISYATNSMRVANAAVYEETCPPLLHNISL-DRT 123

Query: 489 PYLRSNYLANVIFFYN 536
           P   S    N  FFYN
Sbjct: 124 PLTISPGYTNFSFFYN 139


Top