BLASTX nr result
ID: Coptis25_contig00006447
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006447 (1216 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tre... 426 e-117 ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 426 e-117 ref|XP_004171505.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 425 e-116 ref|XP_004150128.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 425 e-116 ref|XP_002326399.1| predicted protein [Populus trichocarpa] gi|2... 424 e-116 >gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tremula var. glandulosa] Length = 492 Score = 426 bits (1096), Expect = e-117 Identities = 223/363 (61%), Positives = 274/363 (75%), Gaps = 7/363 (1%) Frame = -3 Query: 1070 ETKR-WGDVVDXXXXXXXXXXXXXXXXXXLESLKIEEDVKKENDFLEEAEDTNITAVTAE 894 ETKR W D VD +++L I+E+ K N FL+E ED+ I AVT Sbjct: 22 ETKRLWSDEVDDEEVQPSATEEKAVSELNVDALAIDENTKV-NKFLDEPEDSRIQAVTTG 80 Query: 893 DTLYSTAATFEDLNLSEELLRGLYVEMKFTRPSKIQSVSLPMILSPPYKNLIAQAHNGSG 714 DT Y++A+TFEDLNLS ELL+GLYVEMKF +PSKIQ++SLPMI++PPYK+LIAQAHNGSG Sbjct: 81 DTPYTSASTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMIMTPPYKDLIAQAHNGSG 140 Query: 713 KTTCFVLGMLSRVDPNLKSPQALCVCPTRELVVQNLEVLRKMGKYTGITSIPALPTKDGR 534 KTTCFVLGMLSRVDP L+ PQALC+CPTREL +QN+EVLRKMGKYTGI+S A+P + Sbjct: 141 KTTCFVLGMLSRVDPQLQRPQALCICPTRELSIQNMEVLRKMGKYTGISSECAVPIESRN 200 Query: 533 ------RGQVVDQVVIGTPGTIGRWFSYKTLSPRDLKILVFDEADHMLADSGFQEDSLKL 372 R + QVVIGTPGTI R S K L D+K+LVFDEADHMLA GFQ+DSL++ Sbjct: 201 NDRSKSRPPISAQVVIGTPGTIKRLMSQKKLGVTDMKVLVFDEADHMLAKDGFQDDSLRI 260 Query: 371 MRDIRKANRNIQILLFSATFNETVKSFAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDE 192 M+DI++ N + Q+LLFSATF+ETVK+F +K V D NQ+FVKKE+LSL+ +KQYKV PDE Sbjct: 261 MKDIQRFNSHCQVLLFSATFDETVKNFVSKVVKDYNQLFVKKEDLSLESLKQYKVILPDE 320 Query: 191 KAKLELIKDRIFELGEKLGQTIIFVNSKNSAKLLHEELGDYGYGCTTLHGNLDKEYRDKV 12 AK+ ++KDRI ELGE +GQ IIFVN+K SA +LH L D GY TT+HG L+ E RDK+ Sbjct: 321 LAKIGVVKDRILELGENIGQIIIFVNTKRSASMLHTSLVDLGYEVTTIHGALNLEDRDKI 380 Query: 11 VKE 3 VKE Sbjct: 381 VKE 383 >ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Vitis vinifera] gi|297740016|emb|CBI30198.3| unnamed protein product [Vitis vinifera] Length = 473 Score = 426 bits (1094), Expect = e-117 Identities = 221/358 (61%), Positives = 273/358 (76%), Gaps = 6/358 (1%) Frame = -3 Query: 1058 WGDVVDXXXXXXXXXXXXXXXXXXLESLKIEEDVKKENDFLEEAEDTNITAVTAEDTLYS 879 WGDV D ESL I ++ K E + L+E +D++I AVT+ DT Y+ Sbjct: 12 WGDVEDDPPSSSSTPAVDLPV----ESLTIHDEAK-EAESLDEPKDSSIQAVTSGDTPYT 66 Query: 878 TAATFEDLNLSEELLRGLYVEMKFTRPSKIQSVSLPMILSPPYKNLIAQAHNGSGKTTCF 699 +A+TFEDLNLS ELLRG+Y EMKF RPSKIQ++SLPMIL+PPYKNLIAQAHNGSGKTTCF Sbjct: 67 SASTFEDLNLSPELLRGIYSEMKFERPSKIQAISLPMILTPPYKNLIAQAHNGSGKTTCF 126 Query: 698 VLGMLSRVDPNLKSPQALCVCPTRELVVQNLEVLRKMGKYTGITSIPALP------TKDG 537 VLGMLSRVDP L+ PQALC+CPTREL +QNLEVLRKMGK+TGI S A+P T Sbjct: 127 VLGMLSRVDPKLQVPQALCICPTRELAIQNLEVLRKMGKHTGIESECAIPMDSANYTSIS 186 Query: 536 RRGQVVDQVVIGTPGTIGRWFSYKTLSPRDLKILVFDEADHMLADSGFQEDSLKLMRDIR 357 +R V QVVIGTPGT+ +W S++ L ++KILVFDEADHMLA+ GF++DSL++M+ I Sbjct: 187 QRPPVKAQVVIGTPGTVKKWMSHRKLGISNMKILVFDEADHMLAEDGFKDDSLRIMKAIE 246 Query: 356 KANRNIQILLFSATFNETVKSFAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDEKAKLE 177 K+ Q+LLFSATFN+TVK+F + V D NQMFVKKEELSL VKQYKV CPDE +K+ Sbjct: 247 KSGAQCQVLLFSATFNDTVKNFVTRIVKDYNQMFVKKEELSLQSVKQYKVKCPDELSKIL 306 Query: 176 LIKDRIFELGEKLGQTIIFVNSKNSAKLLHEELGDYGYGCTTLHGNLDKEYRDKVVKE 3 +IKD+IFE+G+KLGQTIIFV +KNSA +LH+ L D+GY TT+ G L +E RDK++KE Sbjct: 307 VIKDKIFEIGQKLGQTIIFVRTKNSAGMLHKALVDFGYEVTTIQGALRQEDRDKIIKE 364 >ref|XP_004171505.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis sativus] Length = 508 Score = 425 bits (1093), Expect = e-116 Identities = 216/333 (64%), Positives = 265/333 (79%), Gaps = 6/333 (1%) Frame = -3 Query: 983 ESLKIEEDVKKENDFLEEAEDTNITAVTAEDTLYSTAATFEDLNLSEELLRGLYVEMKFT 804 ESLKI++D LEE D+NITAVT DT YS+A+TFEDLNLS+ELL+GLYVEMKF Sbjct: 63 ESLKIQDDTN-----LEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFH 117 Query: 803 RPSKIQSVSLPMILSPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPNLKSPQALCVCPTRE 624 +PSKIQ++SLPMIL+PPYK+LIAQAHNGSGKTTCFVLGMLSRVD NLK+PQA C+CPTRE Sbjct: 118 KPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRE 177 Query: 623 LVVQNLEVLRKMGKYTGITSIPALPTKDG------RRGQVVDQVVIGTPGTIGRWFSYKT 462 L +QN+EVL+KMGKYTGITS A+P +R + QVVIGTPGTI +W S + Sbjct: 178 LAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRK 237 Query: 461 LSPRDLKILVFDEADHMLADSGFQEDSLKLMRDIRKANRNIQILLFSATFNETVKSFAAK 282 L +KILVFDEADHML + GFQ+DSL++MRDI +++ + Q+LLFSATF+E VK+F ++ Sbjct: 238 LGVSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSR 297 Query: 281 HVSDPNQMFVKKEELSLDVVKQYKVYCPDEKAKLELIKDRIFELGEKLGQTIIFVNSKNS 102 V D NQ+FVKKEELSL+ VKQYK+ CPDE K+ +IKDRIFEL +KLGQTIIFV ++NS Sbjct: 298 VVKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNS 357 Query: 101 AKLLHEELGDYGYGCTTLHGNLDKEYRDKVVKE 3 A +LH+ L D GY TT+ G L E RDK++KE Sbjct: 358 AGMLHKALVDLGYEVTTIQGALTTEIRDKIIKE 390 >ref|XP_004150128.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis sativus] Length = 508 Score = 425 bits (1092), Expect = e-116 Identities = 216/333 (64%), Positives = 265/333 (79%), Gaps = 6/333 (1%) Frame = -3 Query: 983 ESLKIEEDVKKENDFLEEAEDTNITAVTAEDTLYSTAATFEDLNLSEELLRGLYVEMKFT 804 ESLKI++D LEE D+NITAVT DT YS+A+TFEDLNLS+ELL+GLYVEMKF Sbjct: 63 ESLKIQDDTN-----LEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFH 117 Query: 803 RPSKIQSVSLPMILSPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPNLKSPQALCVCPTRE 624 +PSKIQ++SLPMIL+PPYK+LIAQAHNGSGKTTCFVLGMLSRVD NLK+PQA C+CPTRE Sbjct: 118 KPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRE 177 Query: 623 LVVQNLEVLRKMGKYTGITSIPALPTKDG------RRGQVVDQVVIGTPGTIGRWFSYKT 462 L +QN+EVL+KMGKYTGITS A+P +R + QVVIGTPGTI +W S + Sbjct: 178 LAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSGRK 237 Query: 461 LSPRDLKILVFDEADHMLADSGFQEDSLKLMRDIRKANRNIQILLFSATFNETVKSFAAK 282 L +KILVFDEADHML + GFQ+DSL++MRDI +++ + Q+LLFSATF+E VK+F ++ Sbjct: 238 LGVSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSR 297 Query: 281 HVSDPNQMFVKKEELSLDVVKQYKVYCPDEKAKLELIKDRIFELGEKLGQTIIFVNSKNS 102 V D NQ+FVKKEELSL+ VKQYK+ CPDE K+ +IKDRIFEL +KLGQTIIFV ++NS Sbjct: 298 VVKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNS 357 Query: 101 AKLLHEELGDYGYGCTTLHGNLDKEYRDKVVKE 3 A +LH+ L D GY TT+ G L E RDK++KE Sbjct: 358 AGMLHKALVDLGYEVTTIQGALTTEIRDKIIKE 390 >ref|XP_002326399.1| predicted protein [Populus trichocarpa] gi|222833592|gb|EEE72069.1| predicted protein [Populus trichocarpa] Length = 492 Score = 424 bits (1090), Expect = e-116 Identities = 221/363 (60%), Positives = 274/363 (75%), Gaps = 7/363 (1%) Frame = -3 Query: 1070 ETKR-WGDVVDXXXXXXXXXXXXXXXXXXLESLKIEEDVKKENDFLEEAEDTNITAVTAE 894 ETKR W D VD +++L I+E+ K N FL+E ED+ I AVT Sbjct: 22 ETKRLWSDEVDDEEVQPSATEEKAVLELNVDALAIDENTKV-NKFLDEPEDSRIQAVTTG 80 Query: 893 DTLYSTAATFEDLNLSEELLRGLYVEMKFTRPSKIQSVSLPMILSPPYKNLIAQAHNGSG 714 DT Y++A+TFEDLNLS ELL+GLYVEMKF +PSKIQ++SLPMI++PPYK+LIAQAHNGSG Sbjct: 81 DTPYTSASTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMIMTPPYKDLIAQAHNGSG 140 Query: 713 KTTCFVLGMLSRVDPNLKSPQALCVCPTRELVVQNLEVLRKMGKYTGITSIPALPTKDGR 534 KTTCFVLGMLSRVDP +SPQALC+CPTREL +QN+EVL+KMGKYTGI+S A+P + Sbjct: 141 KTTCFVLGMLSRVDPKQQSPQALCICPTRELSIQNMEVLQKMGKYTGISSECAVPIESRN 200 Query: 533 ------RGQVVDQVVIGTPGTIGRWFSYKTLSPRDLKILVFDEADHMLADSGFQEDSLKL 372 R + QVVIGTPGTI R S K L D+K+LVFDEADHMLA GFQ+DSL++ Sbjct: 201 NDRSRYRPPISAQVVIGTPGTIKRLMSQKKLGVNDMKVLVFDEADHMLAKDGFQDDSLRI 260 Query: 371 MRDIRKANRNIQILLFSATFNETVKSFAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDE 192 M+DI++ N + Q+LLFSATF+ETVK+F +K V D NQ+FVKKE+LSL+ +KQYKV PDE Sbjct: 261 MKDIQRFNSHCQVLLFSATFDETVKNFVSKVVKDYNQLFVKKEDLSLESLKQYKVILPDE 320 Query: 191 KAKLELIKDRIFELGEKLGQTIIFVNSKNSAKLLHEELGDYGYGCTTLHGNLDKEYRDKV 12 AK+ ++KDRI ELGE +GQ IIFVN+K SA +LH L + GY TT+HG L+ E RDK+ Sbjct: 321 LAKIRVVKDRILELGENIGQIIIFVNTKRSASMLHTSLVELGYEVTTIHGALNLEDRDKI 380 Query: 11 VKE 3 VKE Sbjct: 381 VKE 383