BLASTX nr result
ID: Coptis25_contig00006434
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006434 (842 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826... 119 1e-24 ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group] g... 115 9e-24 gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indi... 115 9e-24 dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica ... 115 9e-24 ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group] g... 114 3e-23 >ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium distachyon] Length = 295 Score = 119 bits (297), Expect = 1e-24 Identities = 72/166 (43%), Positives = 88/166 (53%) Frame = -3 Query: 840 EPRGFAFVQFVDGYDAAEAQYHMNRQLFGGREITVVLAAETRKRPEEMRSRAXXXXXXXX 661 EPRGFAFV+FVD YDA+EAQYHMNRQ+F GREITVVLAAE+RKRPE+MRSR Sbjct: 104 EPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRPEDMRSRTRIRGYSGG 163 Query: 660 XXXXXXXXXXXXXXXXXXXXXXXRYTXXXXXXXXXXXXXXXXRQRDDYSVSPRGRAMDHS 481 R+RDDYS SPRGR + Sbjct: 164 QEGRRSSHYGRSRSRSRSLS-----PRPRGGRPRSRSYSPAPRRRDDYSASPRGRESHRT 218 Query: 480 RSPRDHLQERESGHVRRRSFSPGYDSADNHEADNGHAKKPVYDDTE 343 +SP H +E E G +RRS+SP D +ADN + K+ D++ Sbjct: 219 KSPIRHPKENEEG--KRRSYSPAGRDGDQRDADNDYEKRSPPPDSD 262 >ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group] gi|77556878|gb|ABA99674.1| RNA recognition motif family protein, expressed [Oryza sativa Japonica Group] gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa Japonica Group] gi|215694562|dbj|BAG89555.1| unnamed protein product [Oryza sativa Japonica Group] gi|222617335|gb|EEE53467.1| hypothetical protein OsJ_36595 [Oryza sativa Japonica Group] Length = 263 Score = 115 bits (289), Expect = 9e-24 Identities = 77/197 (39%), Positives = 96/197 (48%) Frame = -3 Query: 840 EPRGFAFVQFVDGYDAAEAQYHMNRQLFGGREITVVLAAETRKRPEEMRSRAXXXXXXXX 661 EPRGFAFV+FVD YDA+EAQYHMNRQ+F GREITVVLAAE+RKRPEEMRSRA Sbjct: 76 EPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGN 135 Query: 660 XXXXXXXXXXXXXXXXXXXXXXXRYTXXXXXXXXXXXXXXXXRQRDDYSVSPRGRAMDHS 481 + R+RDDYS SP + + Sbjct: 136 EGRRSSYYGRSRSRSR---------SPHYRGRPRSRSYSPAPRRRDDYSASPPRKDTHPT 186 Query: 480 RSPRDHLQERESGHVRRRSFSPGYDSADNHEADNGHAKKPVYDDTEEGRPEWXXXXXXXX 301 +SPR +E + +RRS+SP D +ADNG+ K+ D++ P Sbjct: 187 KSPRRQPKEHDE-EKKRRSYSPASRDGDPRDADNGYEKRSPPPDSDGSPPHRRSPRHSSG 245 Query: 300 XXXXXXXXXADLSPRRS 250 AD+SP RS Sbjct: 246 SPPGSRSRSADVSPARS 262 >gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group] Length = 263 Score = 115 bits (289), Expect = 9e-24 Identities = 77/197 (39%), Positives = 96/197 (48%) Frame = -3 Query: 840 EPRGFAFVQFVDGYDAAEAQYHMNRQLFGGREITVVLAAETRKRPEEMRSRAXXXXXXXX 661 EPRGFAFV+FVD YDA+EAQYHMNRQ+F GREITVVLAAE+RKRPEEMRSRA Sbjct: 76 EPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGN 135 Query: 660 XXXXXXXXXXXXXXXXXXXXXXXRYTXXXXXXXXXXXXXXXXRQRDDYSVSPRGRAMDHS 481 + R+RDDYS SP + + Sbjct: 136 EGRRSSYYGRSRSRSR---------SPRYRGRPRSRSYSPAPRRRDDYSASPPRKDTHPT 186 Query: 480 RSPRDHLQERESGHVRRRSFSPGYDSADNHEADNGHAKKPVYDDTEEGRPEWXXXXXXXX 301 +SPR +E + +RRS+SP D +ADNG+ K+ D++ P Sbjct: 187 KSPRRQPKEHDE-EKKRRSYSPASRDGDPRDADNGYEKRSPPPDSDGSPPHRRSPRHSSG 245 Query: 300 XXXXXXXXXADLSPRRS 250 AD+SP RS Sbjct: 246 SPPGSRSRSADVSPARS 262 >dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group] Length = 232 Score = 115 bits (289), Expect = 9e-24 Identities = 77/197 (39%), Positives = 96/197 (48%) Frame = -3 Query: 840 EPRGFAFVQFVDGYDAAEAQYHMNRQLFGGREITVVLAAETRKRPEEMRSRAXXXXXXXX 661 EPRGFAFV+FVD YDA+EAQYHMNRQ+F GREITVVLAAE+RKRPEEMRSRA Sbjct: 45 EPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGN 104 Query: 660 XXXXXXXXXXXXXXXXXXXXXXXRYTXXXXXXXXXXXXXXXXRQRDDYSVSPRGRAMDHS 481 + R+RDDYS SP + + Sbjct: 105 EGRRSSYYGRSRSRSR---------SPHYRGRPRSRSYSPAPRRRDDYSASPPRKDTHPT 155 Query: 480 RSPRDHLQERESGHVRRRSFSPGYDSADNHEADNGHAKKPVYDDTEEGRPEWXXXXXXXX 301 +SPR +E + +RRS+SP D +ADNG+ K+ D++ P Sbjct: 156 KSPRRQPKEHDE-EKKRRSYSPASRDGDPRDADNGYEKRSPPPDSDGSPPHRRSPRHSSG 214 Query: 300 XXXXXXXXXADLSPRRS 250 AD+SP RS Sbjct: 215 SPPGSRSRSADVSPARS 231 >ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group] gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa] gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group] gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group] Length = 265 Score = 114 bits (285), Expect = 3e-23 Identities = 71/170 (41%), Positives = 89/170 (52%) Frame = -3 Query: 840 EPRGFAFVQFVDGYDAAEAQYHMNRQLFGGREITVVLAAETRKRPEEMRSRAXXXXXXXX 661 EPRGFAFV+FVD YDA+EAQYHMNRQ+ GREITVVLAAE+RKRPEEMRSRA Sbjct: 76 EPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLAAESRKRPEEMRSRARVRGYSDH 135 Query: 660 XXXXXXXXXXXXXXXXXXXXXXXRYTXXXXXXXXXXXXXXXXRQRDDYSVSPRGRAMDHS 481 + R+RDDYS SP+ + + Sbjct: 136 EGRRSSHYGRSRSRSRSR-------SPRYRGRPRSRSYSPAPRRRDDYSASPQRKDTHRA 188 Query: 480 RSPRDHLQERESGHVRRRSFSPGYDSADNHEADNGHAKKPVYDDTEEGRP 331 +SPR +E E +RRS+SP D +ADNG+ K+ D++ P Sbjct: 189 KSPRRQPKEHEVDK-KRRSYSPANKDGDRRDADNGYEKRSPPADSDGSPP 237