BLASTX nr result
ID: Coptis25_contig00006425
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006425 (1378 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003518027.1| PREDICTED: succinate dehydrogenase [ubiquino... 622 e-176 ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus c... 622 e-176 ref|XP_003631879.1| PREDICTED: succinate dehydrogenase [ubiquino... 616 e-174 ref|XP_002269407.1| PREDICTED: succinate dehydrogenase [ubiquino... 616 e-174 ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|2... 615 e-174 >ref|XP_003518027.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial-like [Glycine max] Length = 634 Score = 622 bits (1603), Expect = e-176 Identities = 310/384 (80%), Positives = 324/384 (84%) Frame = -2 Query: 1377 HPTGIYGVGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGR 1198 HPTGIYG GCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGR Sbjct: 285 HPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGR 344 Query: 1197 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 1018 GVGPLKDHIYLHLNHLPP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT Sbjct: 345 GVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 404 Query: 1017 NYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGANSLLDIVVFGRACANRVAEI 838 N+HGEV+ IKGDDPD++VPGLMAAGE ACASVHG+NRLGANSLLDIVVFGRACANRV+EI Sbjct: 405 NHHGEVITIKGDDPDAVVPGLMAAGETACASVHGANRLGANSLLDIVVFGRACANRVSEI 464 Query: 837 SRPGQKQKPLEADAGEKTIAWLDKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLDKIR 658 RPG+KQKPLE DAG KTIAWL DK+R Sbjct: 465 QRPGEKQKPLEKDAGMKTIAWL----------------------------------DKLR 490 Query: 657 RSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDRSLIWXX 478 SNGSLPT KIRL+MQRIMQNNAAVFRT+ETLEEGCQLIDKAWESFHDVKLKDRSLIW Sbjct: 491 NSNGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDRSLIWNS 550 Query: 477 XXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENGKIRL 298 NACITMHSAEARKESRGAHAREDFTKRDDE WMKHTLGYW+N K+RL Sbjct: 551 DLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWMKHTLGYWDNEKVRL 610 Query: 297 DYRPVHMNTLDDEVEPFPPKARVY 226 DYRPVHMNTLDDEVE FPPKARVY Sbjct: 611 DYRPVHMNTLDDEVESFPPKARVY 634 >ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus communis] gi|223529979|gb|EEF31905.1| succinate dehydrogenase, putative [Ricinus communis] Length = 622 Score = 622 bits (1603), Expect = e-176 Identities = 310/384 (80%), Positives = 325/384 (84%) Frame = -2 Query: 1377 HPTGIYGVGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGR 1198 HPTGIYG GCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGR Sbjct: 273 HPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGR 332 Query: 1197 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 1018 GVGPLKDHIYLHLNHLPP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT Sbjct: 333 GVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 392 Query: 1017 NYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGANSLLDIVVFGRACANRVAEI 838 NYHGEVV +KG+DPDS+VPGLMAAGEAACASVHG+NRLGANSLLDIVVFGRACANRVAEI Sbjct: 393 NYHGEVVTVKGNDPDSVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI 452 Query: 837 SRPGQKQKPLEADAGEKTIAWLDKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLDKIR 658 RPG+KQKPLE DAGE+TIAWL DK+R Sbjct: 453 QRPGEKQKPLEKDAGERTIAWL----------------------------------DKLR 478 Query: 657 RSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDRSLIWXX 478 SNGSLPT KIRL+MQR MQNNAAVFRT+ETLEEGCQLIDKAWESFHDVKLKDRSLIW Sbjct: 479 NSNGSLPTSKIRLNMQRTMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDRSLIWNS 538 Query: 477 XXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENGKIRL 298 NACITMHSAEARKESRGAHAREDFTKRDD++WMKHTLGYWEN K+RL Sbjct: 539 DLIETVELENLLINACITMHSAEARKESRGAHAREDFTKRDDKDWMKHTLGYWENEKVRL 598 Query: 297 DYRPVHMNTLDDEVEPFPPKARVY 226 DYRPVHMNTLDDE+E PPKARVY Sbjct: 599 DYRPVHMNTLDDEMETIPPKARVY 622 >ref|XP_003631879.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial isoform 2 [Vitis vinifera] Length = 622 Score = 616 bits (1589), Expect = e-174 Identities = 305/384 (79%), Positives = 325/384 (84%) Frame = -2 Query: 1377 HPTGIYGVGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGR 1198 HPTGIYG GCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGR Sbjct: 273 HPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGR 332 Query: 1197 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 1018 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT Sbjct: 333 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 392 Query: 1017 NYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGANSLLDIVVFGRACANRVAEI 838 NYHGEV+ IKG+DPD++VPGLMAAGEAACASVHG+NRLGANSLLDIVVFGRACANRVAEI Sbjct: 393 NYHGEVLTIKGNDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI 452 Query: 837 SRPGQKQKPLEADAGEKTIAWLDKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLDKIR 658 +PG+KQKPLE D+GEKTIAWL DK+R Sbjct: 453 HKPGEKQKPLEKDSGEKTIAWL----------------------------------DKLR 478 Query: 657 RSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDRSLIWXX 478 SNGS+PT KIRL+MQR+MQNNAAVFRT+ETLEEGC+LIDKAWESFHDV+LKDRSLIW Sbjct: 479 NSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDKAWESFHDVQLKDRSLIWNS 538 Query: 477 XXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENGKIRL 298 NACITMHSAEARKESRGAHAREDFTKRDDENW++HTLGYWEN K+RL Sbjct: 539 DLSETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWIRHTLGYWENEKVRL 598 Query: 297 DYRPVHMNTLDDEVEPFPPKARVY 226 DYRPVHMN LDDE+E PPKARVY Sbjct: 599 DYRPVHMNPLDDEIESIPPKARVY 622 >ref|XP_002269407.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial isoform 1 [Vitis vinifera] gi|297735168|emb|CBI17530.3| unnamed protein product [Vitis vinifera] Length = 670 Score = 616 bits (1589), Expect = e-174 Identities = 305/384 (79%), Positives = 325/384 (84%) Frame = -2 Query: 1377 HPTGIYGVGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGR 1198 HPTGIYG GCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGR Sbjct: 321 HPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGR 380 Query: 1197 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 1018 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT Sbjct: 381 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 440 Query: 1017 NYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGANSLLDIVVFGRACANRVAEI 838 NYHGEV+ IKG+DPD++VPGLMAAGEAACASVHG+NRLGANSLLDIVVFGRACANRVAEI Sbjct: 441 NYHGEVLTIKGNDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI 500 Query: 837 SRPGQKQKPLEADAGEKTIAWLDKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLDKIR 658 +PG+KQKPLE D+GEKTIAWL DK+R Sbjct: 501 HKPGEKQKPLEKDSGEKTIAWL----------------------------------DKLR 526 Query: 657 RSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDRSLIWXX 478 SNGS+PT KIRL+MQR+MQNNAAVFRT+ETLEEGC+LIDKAWESFHDV+LKDRSLIW Sbjct: 527 NSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDKAWESFHDVQLKDRSLIWNS 586 Query: 477 XXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENGKIRL 298 NACITMHSAEARKESRGAHAREDFTKRDDENW++HTLGYWEN K+RL Sbjct: 587 DLSETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWIRHTLGYWENEKVRL 646 Query: 297 DYRPVHMNTLDDEVEPFPPKARVY 226 DYRPVHMN LDDE+E PPKARVY Sbjct: 647 DYRPVHMNPLDDEIESIPPKARVY 670 >ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|222836892|gb|EEE75285.1| predicted protein [Populus trichocarpa] Length = 638 Score = 615 bits (1587), Expect = e-174 Identities = 308/386 (79%), Positives = 324/386 (83%), Gaps = 2/386 (0%) Frame = -2 Query: 1377 HPTGIYGVGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGR 1198 HPTGIYG GCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGR Sbjct: 287 HPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGR 346 Query: 1197 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 1018 GVGPLKDHIYLHLNHLPP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT Sbjct: 347 GVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 406 Query: 1017 NYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGANSLLDIVVFGRACANRVAEI 838 NYHGEVV +KGDDPD++VPGLMAAGEAACASVHG+NRLGANSLLDIVVFGRACANRVA+I Sbjct: 407 NYHGEVVTLKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAKI 466 Query: 837 SRPGQ--KQKPLEADAGEKTIAWLDKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLDK 664 RPG+ KQKPLE DAGE+TIAWL DK Sbjct: 467 HRPGKLNKQKPLEKDAGERTIAWL----------------------------------DK 492 Query: 663 IRRSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDRSLIW 484 +R SNGSL T IRL+MQR MQNNAAVFRT+ETLEEGC LIDKAWESFHDVK+KDRSLIW Sbjct: 493 LRNSNGSLSTSHIRLNMQRTMQNNAAVFRTQETLEEGCHLIDKAWESFHDVKVKDRSLIW 552 Query: 483 XXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENGKI 304 NAC+TMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWEN K+ Sbjct: 553 NSDLIETLELENLLINACVTMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKV 612 Query: 303 RLDYRPVHMNTLDDEVEPFPPKARVY 226 RLDYRPVHMNTLDDE+EPFPPKARVY Sbjct: 613 RLDYRPVHMNTLDDEIEPFPPKARVY 638