BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006425
         (1378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518027.1| PREDICTED: succinate dehydrogenase [ubiquino...   622   e-176
ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus c...   622   e-176
ref|XP_003631879.1| PREDICTED: succinate dehydrogenase [ubiquino...   616   e-174
ref|XP_002269407.1| PREDICTED: succinate dehydrogenase [ubiquino...   616   e-174
ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|2...   615   e-174

>ref|XP_003518027.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit
            1, mitochondrial-like [Glycine max]
          Length = 634

 Score =  622 bits (1603), Expect = e-176
 Identities = 310/384 (80%), Positives = 324/384 (84%)
 Frame = -2

Query: 1377 HPTGIYGVGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGR 1198
            HPTGIYG GCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGR
Sbjct: 285  HPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGR 344

Query: 1197 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 1018
            GVGPLKDHIYLHLNHLPP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT
Sbjct: 345  GVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 404

Query: 1017 NYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGANSLLDIVVFGRACANRVAEI 838
            N+HGEV+ IKGDDPD++VPGLMAAGE ACASVHG+NRLGANSLLDIVVFGRACANRV+EI
Sbjct: 405  NHHGEVITIKGDDPDAVVPGLMAAGETACASVHGANRLGANSLLDIVVFGRACANRVSEI 464

Query: 837  SRPGQKQKPLEADAGEKTIAWLDKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLDKIR 658
             RPG+KQKPLE DAG KTIAWL                                  DK+R
Sbjct: 465  QRPGEKQKPLEKDAGMKTIAWL----------------------------------DKLR 490

Query: 657  RSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDRSLIWXX 478
             SNGSLPT KIRL+MQRIMQNNAAVFRT+ETLEEGCQLIDKAWESFHDVKLKDRSLIW  
Sbjct: 491  NSNGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDRSLIWNS 550

Query: 477  XXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENGKIRL 298
                         NACITMHSAEARKESRGAHAREDFTKRDDE WMKHTLGYW+N K+RL
Sbjct: 551  DLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWMKHTLGYWDNEKVRL 610

Query: 297  DYRPVHMNTLDDEVEPFPPKARVY 226
            DYRPVHMNTLDDEVE FPPKARVY
Sbjct: 611  DYRPVHMNTLDDEVESFPPKARVY 634


>ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus communis]
            gi|223529979|gb|EEF31905.1| succinate dehydrogenase,
            putative [Ricinus communis]
          Length = 622

 Score =  622 bits (1603), Expect = e-176
 Identities = 310/384 (80%), Positives = 325/384 (84%)
 Frame = -2

Query: 1377 HPTGIYGVGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGR 1198
            HPTGIYG GCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGR
Sbjct: 273  HPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGR 332

Query: 1197 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 1018
            GVGPLKDHIYLHLNHLPP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT
Sbjct: 333  GVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 392

Query: 1017 NYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGANSLLDIVVFGRACANRVAEI 838
            NYHGEVV +KG+DPDS+VPGLMAAGEAACASVHG+NRLGANSLLDIVVFGRACANRVAEI
Sbjct: 393  NYHGEVVTVKGNDPDSVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI 452

Query: 837  SRPGQKQKPLEADAGEKTIAWLDKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLDKIR 658
             RPG+KQKPLE DAGE+TIAWL                                  DK+R
Sbjct: 453  QRPGEKQKPLEKDAGERTIAWL----------------------------------DKLR 478

Query: 657  RSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDRSLIWXX 478
             SNGSLPT KIRL+MQR MQNNAAVFRT+ETLEEGCQLIDKAWESFHDVKLKDRSLIW  
Sbjct: 479  NSNGSLPTSKIRLNMQRTMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDRSLIWNS 538

Query: 477  XXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENGKIRL 298
                         NACITMHSAEARKESRGAHAREDFTKRDD++WMKHTLGYWEN K+RL
Sbjct: 539  DLIETVELENLLINACITMHSAEARKESRGAHAREDFTKRDDKDWMKHTLGYWENEKVRL 598

Query: 297  DYRPVHMNTLDDEVEPFPPKARVY 226
            DYRPVHMNTLDDE+E  PPKARVY
Sbjct: 599  DYRPVHMNTLDDEMETIPPKARVY 622


>ref|XP_003631879.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit
            1, mitochondrial isoform 2 [Vitis vinifera]
          Length = 622

 Score =  616 bits (1589), Expect = e-174
 Identities = 305/384 (79%), Positives = 325/384 (84%)
 Frame = -2

Query: 1377 HPTGIYGVGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGR 1198
            HPTGIYG GCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGR
Sbjct: 273  HPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGR 332

Query: 1197 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 1018
            GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT
Sbjct: 333  GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 392

Query: 1017 NYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGANSLLDIVVFGRACANRVAEI 838
            NYHGEV+ IKG+DPD++VPGLMAAGEAACASVHG+NRLGANSLLDIVVFGRACANRVAEI
Sbjct: 393  NYHGEVLTIKGNDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI 452

Query: 837  SRPGQKQKPLEADAGEKTIAWLDKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLDKIR 658
             +PG+KQKPLE D+GEKTIAWL                                  DK+R
Sbjct: 453  HKPGEKQKPLEKDSGEKTIAWL----------------------------------DKLR 478

Query: 657  RSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDRSLIWXX 478
             SNGS+PT KIRL+MQR+MQNNAAVFRT+ETLEEGC+LIDKAWESFHDV+LKDRSLIW  
Sbjct: 479  NSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDKAWESFHDVQLKDRSLIWNS 538

Query: 477  XXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENGKIRL 298
                         NACITMHSAEARKESRGAHAREDFTKRDDENW++HTLGYWEN K+RL
Sbjct: 539  DLSETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWIRHTLGYWENEKVRL 598

Query: 297  DYRPVHMNTLDDEVEPFPPKARVY 226
            DYRPVHMN LDDE+E  PPKARVY
Sbjct: 599  DYRPVHMNPLDDEIESIPPKARVY 622


>ref|XP_002269407.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit
            1, mitochondrial isoform 1 [Vitis vinifera]
            gi|297735168|emb|CBI17530.3| unnamed protein product
            [Vitis vinifera]
          Length = 670

 Score =  616 bits (1589), Expect = e-174
 Identities = 305/384 (79%), Positives = 325/384 (84%)
 Frame = -2

Query: 1377 HPTGIYGVGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGR 1198
            HPTGIYG GCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGR
Sbjct: 321  HPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGR 380

Query: 1197 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 1018
            GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT
Sbjct: 381  GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 440

Query: 1017 NYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGANSLLDIVVFGRACANRVAEI 838
            NYHGEV+ IKG+DPD++VPGLMAAGEAACASVHG+NRLGANSLLDIVVFGRACANRVAEI
Sbjct: 441  NYHGEVLTIKGNDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI 500

Query: 837  SRPGQKQKPLEADAGEKTIAWLDKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLDKIR 658
             +PG+KQKPLE D+GEKTIAWL                                  DK+R
Sbjct: 501  HKPGEKQKPLEKDSGEKTIAWL----------------------------------DKLR 526

Query: 657  RSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDRSLIWXX 478
             SNGS+PT KIRL+MQR+MQNNAAVFRT+ETLEEGC+LIDKAWESFHDV+LKDRSLIW  
Sbjct: 527  NSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDKAWESFHDVQLKDRSLIWNS 586

Query: 477  XXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENGKIRL 298
                         NACITMHSAEARKESRGAHAREDFTKRDDENW++HTLGYWEN K+RL
Sbjct: 587  DLSETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWIRHTLGYWENEKVRL 646

Query: 297  DYRPVHMNTLDDEVEPFPPKARVY 226
            DYRPVHMN LDDE+E  PPKARVY
Sbjct: 647  DYRPVHMNPLDDEIESIPPKARVY 670


>ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|222836892|gb|EEE75285.1|
            predicted protein [Populus trichocarpa]
          Length = 638

 Score =  615 bits (1587), Expect = e-174
 Identities = 308/386 (79%), Positives = 324/386 (83%), Gaps = 2/386 (0%)
 Frame = -2

Query: 1377 HPTGIYGVGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGR 1198
            HPTGIYG GCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGR
Sbjct: 287  HPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGR 346

Query: 1197 GVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 1018
            GVGPLKDHIYLHLNHLPP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT
Sbjct: 347  GVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPT 406

Query: 1017 NYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGANSLLDIVVFGRACANRVAEI 838
            NYHGEVV +KGDDPD++VPGLMAAGEAACASVHG+NRLGANSLLDIVVFGRACANRVA+I
Sbjct: 407  NYHGEVVTLKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAKI 466

Query: 837  SRPGQ--KQKPLEADAGEKTIAWLDKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLDK 664
             RPG+  KQKPLE DAGE+TIAWL                                  DK
Sbjct: 467  HRPGKLNKQKPLEKDAGERTIAWL----------------------------------DK 492

Query: 663  IRRSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDRSLIW 484
            +R SNGSL T  IRL+MQR MQNNAAVFRT+ETLEEGC LIDKAWESFHDVK+KDRSLIW
Sbjct: 493  LRNSNGSLSTSHIRLNMQRTMQNNAAVFRTQETLEEGCHLIDKAWESFHDVKVKDRSLIW 552

Query: 483  XXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENGKI 304
                           NAC+TMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWEN K+
Sbjct: 553  NSDLIETLELENLLINACVTMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKV 612

Query: 303  RLDYRPVHMNTLDDEVEPFPPKARVY 226
            RLDYRPVHMNTLDDE+EPFPPKARVY
Sbjct: 613  RLDYRPVHMNTLDDEIEPFPPKARVY 638