BLASTX nr result
ID: Coptis25_contig00006414
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006414 (1587 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACL51019.1| F-box family protein [Citrus trifoliata] 682 0.0 gb|AFB74452.1| F-box family protein [Prunus persica] 672 0.0 ref|XP_002514903.1| conserved hypothetical protein [Ricinus comm... 664 0.0 ref|XP_002297845.1| f-box family protein [Populus trichocarpa] g... 661 0.0 gb|ACI13687.1| Fbox protein [Malus x domestica] 658 0.0 >gb|ACL51019.1| F-box family protein [Citrus trifoliata] Length = 468 Score = 682 bits (1760), Expect = 0.0 Identities = 318/413 (76%), Positives = 358/413 (86%) Frame = +1 Query: 28 RWIFLDVDDSTVDDGYYSLILKGRKSGSSKMVVPCKSPPAKKSRKERNCNKLLENVNVTE 207 RW +VDDS DD YY ++ KSGS KM+ P K PP+K+SRKERN KL + + E Sbjct: 54 RWCLPEVDDSAADD-YYGFVMAAGKSGSCKMLEPVKPPPSKRSRKERNRGKLAGSTSTAE 112 Query: 208 VMDPLIWHKLPEDLFEAVIARLPMSTLFRFRSVCQKWNLLLASHSFSKHCAEVPQGYPWF 387 M+ IW + PEDL+EAVIARLP++T FRFRSVCQKWN LL SHSFS+HCA+VPQG PWF Sbjct: 113 AMEQEIWKEFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLESHSFSQHCAQVPQGNPWF 172 Query: 388 YTITHENVNTGAMYDPSLKKWYHPSISSLPTKVIILPVASAGGLVCFLDIGHRNFYICNP 567 YTITHENVN+GAMYDPSLKKW+HP+ISSLPTK+IILPVASA GLVCFLDIGHRNFY+CNP Sbjct: 173 YTITHENVNSGAMYDPSLKKWHHPTISSLPTKMIILPVASARGLVCFLDIGHRNFYVCNP 232 Query: 568 LTQSFKELPIRSVRVWSRVAVGMTLNGSSTDGGYKVLWLGCDGEYEVYDSMKETWTRFGN 747 LTQSFKELP RSV+VWSRVAVGMTLNG+ST GYK+LW+GCDGEYE+YDS++ +WTR G+ Sbjct: 233 LTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDGEYEIYDSLRNSWTRPGS 292 Query: 748 MPSNIKLPLSLNFRSQAVSFKSTLYFMRADPDGIVSYDMVNGVWKQFTIPAPPDLTDHSL 927 MPSNIKLPLSLNFRSQAVS LYFMR+DP+GIVSY+MV GVWKQF IPAP L DH+L Sbjct: 293 MPSNIKLPLSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVWKQFIIPAPLHLNDHTL 352 Query: 928 AECEGRIMLVGLLTKNAATCVCVWELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK 1107 AEC GRIMLVGLLTKNAATCVC+WELQKMTLLWKEVDRMPNIWCL+FYGKHVRMTCLGNK Sbjct: 353 AECGGRIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNK 412 Query: 1108 GLLMLSLRSKQMNRLVTYDVSSRGWQKVPVCILPSGKKRQWIACGTAFHPSPT 1266 GLLMLS RS+QMNRLVTY+V SR W KVP C++P G+KRQWIACGTAFHP T Sbjct: 413 GLLMLSSRSRQMNRLVTYNVMSREWLKVPGCVVPRGRKRQWIACGTAFHPCLT 465 >gb|AFB74452.1| F-box family protein [Prunus persica] Length = 495 Score = 672 bits (1734), Expect = 0.0 Identities = 315/413 (76%), Positives = 356/413 (86%) Frame = +1 Query: 28 RWIFLDVDDSTVDDGYYSLILKGRKSGSSKMVVPCKSPPAKKSRKERNCNKLLENVNVTE 207 RW ++VD+ + DD YYS ++ KSGS KM+ PCK PP K+SRKER K N TE Sbjct: 63 RWCPINVDEGSPDD-YYSFMMAAGKSGSLKMLEPCKPPPTKRSRKERTRGKSSGTTNTTE 121 Query: 208 VMDPLIWHKLPEDLFEAVIARLPMSTLFRFRSVCQKWNLLLASHSFSKHCAEVPQGYPWF 387 M+ IW PEDL+EAVIARLP++T FRFR+VC+KWN LL S SFS+HCAEVPQ PWF Sbjct: 122 PMEQHIWKDFPEDLYEAVIARLPIATFFRFRTVCRKWNSLLDSESFSQHCAEVPQATPWF 181 Query: 388 YTITHENVNTGAMYDPSLKKWYHPSISSLPTKVIILPVASAGGLVCFLDIGHRNFYICNP 567 YTITHENVN+GAMYDPSLKKW+HP+ISSLPTK+I+LPVASAGGLVCFLDIG+RNFY+CNP Sbjct: 182 YTITHENVNSGAMYDPSLKKWHHPTISSLPTKLIVLPVASAGGLVCFLDIGNRNFYVCNP 241 Query: 568 LTQSFKELPIRSVRVWSRVAVGMTLNGSSTDGGYKVLWLGCDGEYEVYDSMKETWTRFGN 747 L QSFKELP RSV+VWSRVAVGMTLNGSST GYK+LW+GCDGEYEVYDS++ +W R G Sbjct: 242 LNQSFKELPARSVKVWSRVAVGMTLNGSSTSEGYKILWVGCDGEYEVYDSVRNSWIRPGI 301 Query: 748 MPSNIKLPLSLNFRSQAVSFKSTLYFMRADPDGIVSYDMVNGVWKQFTIPAPPDLTDHSL 927 MPS++KLPLSLNFRSQAVS TLYFMR+DP+GIVSYDMV G+WKQF IP P LTDH+L Sbjct: 302 MPSSVKLPLSLNFRSQAVSIDDTLYFMRSDPEGIVSYDMVTGIWKQFIIPTPLHLTDHTL 361 Query: 928 AECEGRIMLVGLLTKNAATCVCVWELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK 1107 AEC GRIMLVGLLTKNAATCVC+WELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK Sbjct: 362 AECGGRIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK 421 Query: 1108 GLLMLSLRSKQMNRLVTYDVSSRGWQKVPVCILPSGKKRQWIACGTAFHPSPT 1266 GLLMLSLRS+QMNRLVTY+VSSR W KVP C++P G+KRQWIACGTAF+P T Sbjct: 422 GLLMLSLRSRQMNRLVTYNVSSREWLKVPGCVVPHGRKRQWIACGTAFYPCLT 474 >ref|XP_002514903.1| conserved hypothetical protein [Ricinus communis] gi|223545954|gb|EEF47457.1| conserved hypothetical protein [Ricinus communis] Length = 470 Score = 664 bits (1713), Expect = 0.0 Identities = 309/413 (74%), Positives = 358/413 (86%) Frame = +1 Query: 28 RWIFLDVDDSTVDDGYYSLILKGRKSGSSKMVVPCKSPPAKKSRKERNCNKLLENVNVTE 207 RW LD++D + DD Y L++ KSG KM+ P K PP+KKS+KERN KLL N TE Sbjct: 56 RWCVLDINDGSADD-YCDLVMAAGKSGRCKMLEPSKPPPSKKSKKERNRGKLLGTTNTTE 114 Query: 208 VMDPLIWHKLPEDLFEAVIARLPMSTLFRFRSVCQKWNLLLASHSFSKHCAEVPQGYPWF 387 VM+ IW PEDLFEAVIARLP++T FRFR+VC+KWN LL+S SFS+HC +V Q PWF Sbjct: 115 VMEEEIWKDFPEDLFEAVIARLPIATFFRFRTVCRKWNSLLSSESFSQHCTKVLQANPWF 174 Query: 388 YTITHENVNTGAMYDPSLKKWYHPSISSLPTKVIILPVASAGGLVCFLDIGHRNFYICNP 567 YTITHENVN+GA+YDPSLKKW+HP+ISSLPTK+I+LPVASAGGLVCF+DIGHRNFY+CNP Sbjct: 175 YTITHENVNSGAIYDPSLKKWHHPTISSLPTKMIVLPVASAGGLVCFIDIGHRNFYVCNP 234 Query: 568 LTQSFKELPIRSVRVWSRVAVGMTLNGSSTDGGYKVLWLGCDGEYEVYDSMKETWTRFGN 747 LTQSFKELP RSV+VWSR+AVGMTLNGS+T GGYK+LW+ CDGEYEVYDS+K +W R G+ Sbjct: 235 LTQSFKELPARSVKVWSRIAVGMTLNGSATSGGYKILWVCCDGEYEVYDSLKNSWIRPGS 294 Query: 748 MPSNIKLPLSLNFRSQAVSFKSTLYFMRADPDGIVSYDMVNGVWKQFTIPAPPDLTDHSL 927 MP+NIKLPL LNFRSQAVS +T+YFMR+DP+GIVSY+MV GVW+QF IPAP L+DH+L Sbjct: 295 MPANIKLPLLLNFRSQAVSIDATVYFMRSDPEGIVSYNMVTGVWRQFIIPAPLHLSDHTL 354 Query: 928 AECEGRIMLVGLLTKNAATCVCVWELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK 1107 AE GRIMLVGLL+KNAATCVC+WELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK Sbjct: 355 AEYGGRIMLVGLLSKNAATCVCIWELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK 414 Query: 1108 GLLMLSLRSKQMNRLVTYDVSSRGWQKVPVCILPSGKKRQWIACGTAFHPSPT 1266 GLLMLSLRS+QMNRLVTY+V SR W KVP C++P G+KRQWIACGTAF+P T Sbjct: 415 GLLMLSLRSRQMNRLVTYNVKSREWLKVPGCLVPRGRKRQWIACGTAFYPCLT 467 >ref|XP_002297845.1| f-box family protein [Populus trichocarpa] gi|222845103|gb|EEE82650.1| f-box family protein [Populus trichocarpa] Length = 481 Score = 661 bits (1705), Expect = 0.0 Identities = 311/413 (75%), Positives = 354/413 (85%) Frame = +1 Query: 28 RWIFLDVDDSTVDDGYYSLILKGRKSGSSKMVVPCKSPPAKKSRKERNCNKLLENVNVTE 207 RW FL++DD + DD Y SL++ KSGS KM+ PCK PP+KK RKERN K L + TE Sbjct: 67 RWCFLNLDDGSADD-YCSLVMAAGKSGSFKMLEPCKPPPSKKPRKERNRGKSLGTTSSTE 125 Query: 208 VMDPLIWHKLPEDLFEAVIARLPMSTLFRFRSVCQKWNLLLASHSFSKHCAEVPQGYPWF 387 VM IW + PEDLFEAVIARLP++T FRFRSVC+KWN L S SFS+HCA+VPQ PWF Sbjct: 126 VMQQEIWKEFPEDLFEAVIARLPITTFFRFRSVCRKWNSFLDSQSFSQHCAQVPQSNPWF 185 Query: 388 YTITHENVNTGAMYDPSLKKWYHPSISSLPTKVIILPVASAGGLVCFLDIGHRNFYICNP 567 YTI HENVN+GAMYDPSLKKW+HP+IS LPTK I+LPVASAGGLVCFLDIGHRNFY+CNP Sbjct: 186 YTIAHENVNSGAMYDPSLKKWHHPTISYLPTKTIVLPVASAGGLVCFLDIGHRNFYVCNP 245 Query: 568 LTQSFKELPIRSVRVWSRVAVGMTLNGSSTDGGYKVLWLGCDGEYEVYDSMKETWTRFGN 747 LTQSFKELP RSV+VWSRVAVGMTLN ++ GGYK+LW+ CDGE+EVYDS+K +WTR G+ Sbjct: 246 LTQSFKELPPRSVKVWSRVAVGMTLNSNAASGGYKILWVCCDGEHEVYDSLKNSWTRPGS 305 Query: 748 MPSNIKLPLSLNFRSQAVSFKSTLYFMRADPDGIVSYDMVNGVWKQFTIPAPPDLTDHSL 927 MPS IKLPLSLNFRSQAVS TLYFMR+DP+GIVSY+MV GVWKQ IPAP L+D +L Sbjct: 306 MPSCIKLPLSLNFRSQAVSLGGTLYFMRSDPEGIVSYNMVTGVWKQSIIPAPHHLSDRTL 365 Query: 928 AECEGRIMLVGLLTKNAATCVCVWELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK 1107 A+CEGRI+LVGLLTKNAATCVC+WELQKMTLLWKEVDRMPNIWCL+FYGKHVRMTCLGN Sbjct: 366 AQCEGRIILVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNS 425 Query: 1108 GLLMLSLRSKQMNRLVTYDVSSRGWQKVPVCILPSGKKRQWIACGTAFHPSPT 1266 GLLMLSLRS+QMNRLVTY+V SR W KVP C++P G+KRQWIACGTAF+P T Sbjct: 426 GLLMLSLRSRQMNRLVTYNVVSREWLKVPGCLVPRGRKRQWIACGTAFNPCLT 478 >gb|ACI13687.1| Fbox protein [Malus x domestica] Length = 472 Score = 658 bits (1697), Expect = 0.0 Identities = 308/413 (74%), Positives = 350/413 (84%) Frame = +1 Query: 28 RWIFLDVDDSTVDDGYYSLILKGRKSGSSKMVVPCKSPPAKKSRKERNCNKLLENVNVTE 207 RW ++VD+ + DD YYS+++ KS S KM+ PCK PP K+SRKE+ K N TE Sbjct: 58 RWCPINVDEGSADD-YYSIMMAAGKSRSFKMLEPCKPPPTKRSRKEQTRGKSSGTTNTTE 116 Query: 208 VMDPLIWHKLPEDLFEAVIARLPMSTLFRFRSVCQKWNLLLASHSFSKHCAEVPQGYPWF 387 M+ IW PEDL+EAVIARLP++T FRFR+VC+KWN LL S SFS+HCAEVPQ PWF Sbjct: 117 PMEQHIWKDFPEDLYEAVIARLPVATFFRFRTVCRKWNSLLDSESFSQHCAEVPQATPWF 176 Query: 388 YTITHENVNTGAMYDPSLKKWYHPSISSLPTKVIILPVASAGGLVCFLDIGHRNFYICNP 567 YTITHENVN+GAMYDPSLKKW+HP+I SLPTK+I+LPVASAGGLVCFLDIG+RNFY+CNP Sbjct: 177 YTITHENVNSGAMYDPSLKKWHHPTIFSLPTKLIVLPVASAGGLVCFLDIGNRNFYVCNP 236 Query: 568 LTQSFKELPIRSVRVWSRVAVGMTLNGSSTDGGYKVLWLGCDGEYEVYDSMKETWTRFGN 747 L QSFKELP RSV+VWSR+AVGMTLN SS GGYK+LW+ CDGEYEVYDS+ +WTR G Sbjct: 237 LNQSFKELPARSVKVWSRIAVGMTLNRSSASGGYKILWVVCDGEYEVYDSVTNSWTRPGI 296 Query: 748 MPSNIKLPLSLNFRSQAVSFKSTLYFMRADPDGIVSYDMVNGVWKQFTIPAPPDLTDHSL 927 MPS +KLPLSLNFRSQAVS TLYFMR+DP+GIVSYDM G+WKQF IP P LTDH+L Sbjct: 297 MPSGVKLPLSLNFRSQAVSIDGTLYFMRSDPEGIVSYDMATGIWKQFIIPTPLHLTDHTL 356 Query: 928 AECEGRIMLVGLLTKNAATCVCVWELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK 1107 AEC GRIMLVGLL+KNA TCVC+WELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK Sbjct: 357 AECGGRIMLVGLLSKNAVTCVCIWELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNK 416 Query: 1108 GLLMLSLRSKQMNRLVTYDVSSRGWQKVPVCILPSGKKRQWIACGTAFHPSPT 1266 GLLMLSLRS+QM RLVTY+VSSR W KVP C++P GKKRQWIACGTAF+PS T Sbjct: 417 GLLMLSLRSRQMTRLVTYNVSSREWLKVPGCVVPRGKKRQWIACGTAFYPSLT 469