BLASTX nr result

ID: Coptis25_contig00006412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006412
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272612.1| PREDICTED: early nodulin-like protein 1 [Vit...    56   9e-11
ref|XP_002338337.1| predicted protein [Populus trichocarpa] gi|2...    46   1e-06
ref|XP_002301365.1| predicted protein [Populus trichocarpa] gi|2...    46   1e-06
ref|XP_002517215.1| Mavicyanin, putative [Ricinus communis] gi|2...    44   2e-06
ref|XP_004140151.1| PREDICTED: mavicyanin-like [Cucumis sativus]       43   2e-06

>ref|XP_002272612.1| PREDICTED: early nodulin-like protein 1 [Vitis vinifera]
           gi|296085195|emb|CBI28690.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score = 55.8 bits (133), Expect(2) = 9e-11
 Identities = 22/42 (52%), Positives = 32/42 (76%)
 Frame = +2

Query: 5   YHNVLEVCQNDYDTCNVTAALQTYELGNDPITLSRSGYFYYL 130
           YHNVL+V  +++ +CN TA + T+  GND IT+S+ G+FYYL
Sbjct: 64  YHNVLQVTHDNFKSCNATAPIATFATGNDSITISKYGHFYYL 105



 Score = 35.4 bits (80), Expect(2) = 9e-11
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 199 GIPGHCLAGQKVDIRV 246
           GIPGHC AGQKVDIRV
Sbjct: 107 GIPGHCEAGQKVDIRV 122


>ref|XP_002338337.1| predicted protein [Populus trichocarpa] gi|222871932|gb|EEF09063.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = +2

Query: 5   YHNVLEVCQNDYDTCNVTAALQTYELGNDPITLSRSGYFYYL 130
           +HNV +V    +++CN T+ + TY  G+D +TL + G+FY++
Sbjct: 44  FHNVKQVTHQGFESCNATSPIATYTNGSDTVTLEKLGHFYFI 85



 Score = 30.8 bits (68), Expect(2) = 1e-06
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 199 GIPGHCLAGQKVDIRV 246
           G PGHC AGQK+DI V
Sbjct: 87  GYPGHCQAGQKIDILV 102


>ref|XP_002301365.1| predicted protein [Populus trichocarpa] gi|222843091|gb|EEE80638.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = +2

Query: 5   YHNVLEVCQNDYDTCNVTAALQTYELGNDPITLSRSGYFYYL 130
           +HNV +V    +++CN T+ + TY  G+D +TL + G+FY++
Sbjct: 46  FHNVKQVTHQGFESCNATSPIATYTNGSDTVTLEKLGHFYFI 87



 Score = 30.8 bits (68), Expect(2) = 1e-06
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 199 GIPGHCLAGQKVDIRV 246
           G PGHC AGQK+DI V
Sbjct: 89  GYPGHCQAGQKIDILV 104


>ref|XP_002517215.1| Mavicyanin, putative [Ricinus communis] gi|223543850|gb|EEF45378.1|
           Mavicyanin, putative [Ricinus communis]
          Length = 200

 Score = 44.3 bits (103), Expect(2) = 2e-06
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +2

Query: 5   YHNVLEVCQNDYDTCNVTAALQTYELGNDPITLSRSGYFYY 127
           +HNV+ V    Y  CN +A L TY  GND IT+   G+ Y+
Sbjct: 64  FHNVMRVTHAMYKACNASAPLATYTTGNDSITIKNRGHHYF 104



 Score = 32.0 bits (71), Expect(2) = 2e-06
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 199 GIPGHCLAGQKVDIRV 246
           G+PGHC  GQKVDI V
Sbjct: 107 GVPGHCQGGQKVDINV 122


>ref|XP_004140151.1| PREDICTED: mavicyanin-like [Cucumis sativus]
          Length = 185

 Score = 42.7 bits (99), Expect(2) = 2e-06
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +2

Query: 5   YHNVLEVCQNDYDTCNVTAALQTYELGNDPITLSRSGYFYYL 130
           +HNV+ V    Y +CNV+  ++T+  GND IT+   G+ ++L
Sbjct: 69  FHNVMRVSHEMYKSCNVSRPIETHTSGNDSITIQTRGHHFFL 110



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 199 GIPGHCLAGQKVDIRV 246
           G+PGHC AGQKVDI V
Sbjct: 112 GVPGHCQAGQKVDINV 127


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