BLASTX nr result
ID: Coptis25_contig00006409
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006409 (959 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing fac... 268 2e-69 ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing fac... 265 9e-69 ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing fac... 263 6e-68 ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing fac... 260 3e-67 gb|ACU23171.1| unknown [Glycine max] 259 9e-67 >ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine max] Length = 264 Score = 268 bits (684), Expect = 2e-69 Identities = 145/249 (58%), Positives = 161/249 (64%), Gaps = 15/249 (6%) Frame = +2 Query: 2 RVDMKSGFAFVYFEDERDGDDAIRHLDNTPFGYSKRRLSVEWAXXXXXXXXXXXXKSMAN 181 RVDMKSGFAFVY+EDERD ++AIR LDN PFG+ KRRLSVEWA S AN Sbjct: 30 RVDMKSGFAFVYYEDERDAEEAIRALDNVPFGHEKRRLSVEWARGERGRHRDG---SKAN 86 Query: 182 QRPTKTLFVINFDPINTRTRDIEKHFEPFGKILHVRIRRNFAFVQFDKQEEATKALESTH 361 Q+PTKTLFVINFDPI TR RDIEKHFEP+G +LHVRIRRNFAFVQF+ QE+ATKA+E T+ Sbjct: 87 QKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKAIECTN 146 Query: 362 MSKVLGRVVSVEYALRDDGERGDRHESPRRGYGGRGDSPYG---------------XXXX 496 MSK+L RVVSVEYALRDDGERGD ++SPRRG R SPY Sbjct: 147 MSKILDRVVSVEYALRDDGERGDNYDSPRRGGYERSPSPYHRRPSPDYGRPRSPVYDRYN 206 Query: 497 XXXXXXXXXXDYGRARSPDYGRARSPDYGRXXXXXXXXXXXXXXXXXXXXSPDYGRGRSP 676 DYGR RSPDYGR RSPDYGR SPDYG+ RSP Sbjct: 207 GGGPDRRRSPDYGRHRSPDYGRRRSPDYGR------------------RKSPDYGKPRSP 248 Query: 677 VYDKYNGPS 703 Y +Y S Sbjct: 249 EYGRYRSRS 257 >ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis sativus] gi|449477961|ref|XP_004155176.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis sativus] Length = 253 Score = 265 bits (678), Expect = 9e-69 Identities = 147/230 (63%), Positives = 158/230 (68%), Gaps = 3/230 (1%) Frame = +2 Query: 2 RVDMKSGFAFVYFEDERDGDDAIRHLDNTPFGYSKRRLSVEWAXXXXXXXXXXXXKSMAN 181 R+DMKSGFAFVYFEDERD +DAIR LDN PFGY +RRLSVEWA KSMAN Sbjct: 30 RIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGS-KSMAN 88 Query: 182 QRPTKTLFVINFDPINTRTRDIEKHFEPFGKILHVRIRRNFAFVQFDKQEEATKALESTH 361 QRPTKTLFVINFDPI TR RDIE+HFEP+GK+L+VRIRRNFAFVQF+ QE+ATKALE TH Sbjct: 89 QRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTH 148 Query: 362 MSKVLGRVVSVEYALRDDGERGDRH-ESPRR--GYGGRGDSPYGXXXXXXXXXXXXXXDY 532 MSK+L RVVSVEYALRDDGERGD ESPRR GYG GDSPY + Sbjct: 149 MSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPV---------F 199 Query: 533 GRARSPDYGRARSPDYGRXXXXXXXXXXXXXXXXXXXXSPDYGRGRSPVY 682 R SPDYGRA SP Y R SPDYGR RSP Y Sbjct: 200 RRRPSPDYGRAHSPAYDRYNGPYERRR-----------SPDYGRNRSPEY 238 >ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis vinifera] Length = 241 Score = 263 bits (671), Expect = 6e-68 Identities = 144/244 (59%), Positives = 162/244 (66%), Gaps = 1/244 (0%) Frame = +2 Query: 2 RVDMKSGFAFVYFEDERDGDDAIRHLDNTPFGYSKRRLSVEWAXXXXXXXXXXXXKSMAN 181 RVDMKSGFAFVYFEDE D DDAIR LDN PFGY +RRLSVEWA +SMAN Sbjct: 30 RVDMKSGFAFVYFEDEHDADDAIRGLDNIPFGYDRRRLSVEWAKGERGRHREGS-RSMAN 88 Query: 182 QRPTKTLFVINFDPINTRTRDIEKHFEPFGKILHVRIRRNFAFVQFDKQEEATKALESTH 361 QRPTKTLFVINFDPI TR RDIE+HFEP+GK+LHVRIRRNFAFVQ++ QE+ATKALE TH Sbjct: 89 QRPTKTLFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQYETQEDATKALECTH 148 Query: 362 MSKVLGRVVSVEYALRDDGERGDRHESPRRG-YGGRGDSPYGXXXXXXXXXXXXXXDYGR 538 MSK+L RVVSVEYALRDD D+++SPRRG Y RG+SPYG R Sbjct: 149 MSKILDRVVSVEYALRDDS---DKYDSPRRGGYSRRGESPYG-----------------R 188 Query: 539 ARSPDYGRARSPDYGRXXXXXXXXXXXXXXXXXXXXSPDYGRGRSPVYDKYNGPSYNGGK 718 + SP R R SPDYGR +SPVYD+YNGP+Y + Sbjct: 189 SPSPVNRRGRP-------------------------SPDYGRAQSPVYDRYNGPAYERNR 223 Query: 719 SSEY 730 S EY Sbjct: 224 SPEY 227 >ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine max] Length = 259 Score = 260 bits (665), Expect = 3e-67 Identities = 144/243 (59%), Positives = 159/243 (65%) Frame = +2 Query: 2 RVDMKSGFAFVYFEDERDGDDAIRHLDNTPFGYSKRRLSVEWAXXXXXXXXXXXXKSMAN 181 RVDMKSGFAFVY+EDERD ++AIR LDN PFG+ KRRLSVEWA S AN Sbjct: 30 RVDMKSGFAFVYYEDERDAEEAIRALDNVPFGHEKRRLSVEWARGERGRHHDG---SKAN 86 Query: 182 QRPTKTLFVINFDPINTRTRDIEKHFEPFGKILHVRIRRNFAFVQFDKQEEATKALESTH 361 Q+PTKTLFVINFDPI TR RDIEKHFEP+G +LHVRIRRNFAFVQF+ QE+ATKALE T+ Sbjct: 87 QKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKALECTN 146 Query: 362 MSKVLGRVVSVEYALRDDGERGDRHESPRRGYGGRGDSPYGXXXXXXXXXXXXXXDYGRA 541 MSK+L RVVSVEYALRDDGERGD ++SPRR GG SP Y R Sbjct: 147 MSKILDRVVSVEYALRDDGERGDNYDSPRRR-GGYERSP---------------SPYHRR 190 Query: 542 RSPDYGRARSPDYGRXXXXXXXXXXXXXXXXXXXXSPDYGRGRSPVYDKYNGPSYNGGKS 721 SPDYGR RSP Y R SPDYGR RSP Y + P Y +S Sbjct: 191 PSPDYGRPRSPVYDRYNGGGPDMRR----------SPDYGRHRSPDYGRRRSPDYGKPRS 240 Query: 722 SEY 730 EY Sbjct: 241 PEY 243 >gb|ACU23171.1| unknown [Glycine max] Length = 259 Score = 259 bits (661), Expect = 9e-67 Identities = 143/243 (58%), Positives = 159/243 (65%) Frame = +2 Query: 2 RVDMKSGFAFVYFEDERDGDDAIRHLDNTPFGYSKRRLSVEWAXXXXXXXXXXXXKSMAN 181 RVDMKSGFAFV++EDERD ++AIR LDN PFG+ KRRLSVEWA S AN Sbjct: 30 RVDMKSGFAFVFYEDERDAEEAIRALDNVPFGHEKRRLSVEWARGERGRHHDG---SKAN 86 Query: 182 QRPTKTLFVINFDPINTRTRDIEKHFEPFGKILHVRIRRNFAFVQFDKQEEATKALESTH 361 Q+PTKTLFVINFDPI TR RDIEKHFEP+G +LHVRIRRNFAFVQF+ QE+ATKALE T+ Sbjct: 87 QKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKALECTN 146 Query: 362 MSKVLGRVVSVEYALRDDGERGDRHESPRRGYGGRGDSPYGXXXXXXXXXXXXXXDYGRA 541 MSK+L RVVSVEYALRDDGERGD ++SPRR GG SP Y R Sbjct: 147 MSKILDRVVSVEYALRDDGERGDNYDSPRRR-GGYERSP---------------SPYHRR 190 Query: 542 RSPDYGRARSPDYGRXXXXXXXXXXXXXXXXXXXXSPDYGRGRSPVYDKYNGPSYNGGKS 721 SPDYGR RSP Y R SPDYGR RSP Y + P Y +S Sbjct: 191 PSPDYGRPRSPVYDRYNGGGPDMRR----------SPDYGRHRSPDYGRRRSPDYGKPRS 240 Query: 722 SEY 730 EY Sbjct: 241 PEY 243