BLASTX nr result

ID: Coptis25_contig00006407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006407
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514694.1| synaptosomal associated protein, putative [R...    52   2e-06
ref|XP_003527100.1| PREDICTED: SNAP25 homologous protein SNAP33-...    51   2e-06
gb|ACU18010.1| unknown [Glycine max]                                   51   2e-06

>ref|XP_002514694.1| synaptosomal associated protein, putative [Ricinus communis]
           gi|223546298|gb|EEF47800.1| synaptosomal associated
           protein, putative [Ricinus communis]
          Length = 305

 Score = 52.4 bits (124), Expect(2) = 2e-06
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = +3

Query: 126 QDDSFKRRGNHLEQREKLGVAPAPKGRSNPQKSASEPQMHY 248
           +DDS KRRGNHLEQREKLG+  APKGR++ +    EP   Y
Sbjct: 196 RDDSPKRRGNHLEQREKLGLNAAPKGRTSTRTPPPEPTNAY 236



 Score = 24.3 bits (51), Expect(2) = 2e-06
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 50  GEKLL*SLGGMFS 88
           GEKLL SLGG+FS
Sbjct: 166 GEKLLGSLGGIFS 178


>ref|XP_003527100.1| PREDICTED: SNAP25 homologous protein SNAP33-like [Glycine max]
          Length = 292

 Score = 50.8 bits (120), Expect(2) = 2e-06
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = +3

Query: 129 DDSFKRRGNHLEQREKLGVAPAPKGRSNPQKSASEP 236
           DD  +R+GNHLEQREKLG+  APKG+S  + + SEP
Sbjct: 184 DDPVRRKGNHLEQREKLGLTSAPKGQSKSRPTLSEP 219



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 50  GEKLL*SLGGMFS 88
           GEKLL SLGGMFS
Sbjct: 153 GEKLLGSLGGMFS 165


>gb|ACU18010.1| unknown [Glycine max]
          Length = 292

 Score = 50.8 bits (120), Expect(2) = 2e-06
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = +3

Query: 129 DDSFKRRGNHLEQREKLGVAPAPKGRSNPQKSASEP 236
           DD  +R+GNHLEQREKLG+  APKG+S  + + SEP
Sbjct: 184 DDPVRRKGNHLEQREKLGLTSAPKGQSKSRPTLSEP 219



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 50  GEKLL*SLGGMFS 88
           GEKLL SLGGMFS
Sbjct: 153 GEKLLGSLGGMFS 165


Top