BLASTX nr result

ID: Coptis25_contig00006403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006403
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528708.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_003551617.1| PREDICTED: uncharacterized protein LOC100796...    64   1e-08
ref|XP_002323089.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002308260.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002879754.1| hypothetical protein ARALYDRAFT_345641 [Arab...    58   7e-07

>ref|XP_002528708.1| conserved hypothetical protein [Ricinus communis]
           gi|223531880|gb|EEF33697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 492

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/83 (53%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
 Frame = -2

Query: 259 VQAQVKVLQESRDSLLQENQQLMETISYLQSQVQHLE---DKCSLSAPSXXXXXXXXXXX 89
           ++ QV  L+ESR+SLL+ENQQLME IS LQ QVQ+LE      S S              
Sbjct: 280 LRMQVVELEESRNSLLKENQQLMENISDLQLQVQNLETNISSASTSCEQKKHALEGEDLE 339

Query: 88  AQIEPASILVEKLITENAELVQK 20
           +QIE A  LV+KLITENAELV+K
Sbjct: 340 SQIEAACALVDKLITENAELVEK 362


>ref|XP_003551617.1| PREDICTED: uncharacterized protein LOC100796148 [Glycine max]
          Length = 651

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
 Frame = -2

Query: 259 VQAQVKVLQESRDSLLQENQQLMETISYLQSQVQHLED----KCSLSAPSXXXXXXXXXX 92
           +QAQV+ L+ESR++L  ENQQL E +S LQS VQ+ E+     CS  A            
Sbjct: 412 LQAQVEELEESRNNLFLENQQLREKVSSLQSTVQNHENSNTSSCSWDASVKDLASENEDL 471

Query: 91  XAQIEPASILVEKLITENAELVQK 20
            ++IE A  LVEKL+ ENAELV+K
Sbjct: 472 KSEIEAAFTLVEKLMAENAELVEK 495


>ref|XP_002323089.1| predicted protein [Populus trichocarpa] gi|222867719|gb|EEF04850.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
 Frame = -2

Query: 259 VQAQVKVLQESRDSLLQENQQLMETISYLQSQVQHLEDKCSLSAPS----XXXXXXXXXX 92
           ++ QV  L+ SR+SL++ENQQL E++S L+ Q+Q++E + S+S+ +              
Sbjct: 242 LRMQVVELEYSRNSLVKENQQLKESVSDLKLQLQNVETQQSISSANTSELGKNDAEKEDL 301

Query: 91  XAQIEPASILVEKLITENAELVQK 20
            +QIE A  LV+KLITENAELV+K
Sbjct: 302 NSQIEAACALVDKLITENAELVEK 325


>ref|XP_002308260.1| predicted protein [Populus trichocarpa] gi|222854236|gb|EEE91783.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = -2

Query: 259 VQAQVKVLQESRDSLLQENQQLMETISYLQSQVQHLEDKCSLSAPS--XXXXXXXXXXXA 86
           ++ QV  L++SR+SL++ENQQL E+IS L+ Q+Q+++   S +  S             +
Sbjct: 264 LRMQVVELEDSRNSLVKENQQLKESISNLKLQLQNIDTSVSFANTSELGKLGAEKEELNS 323

Query: 85  QIEPASILVEKLITENAELVQK 20
           QIE A  LV+KLITENA+LV+K
Sbjct: 324 QIEAACALVDKLITENADLVEK 345


>ref|XP_002879754.1| hypothetical protein ARALYDRAFT_345641 [Arabidopsis lyrata subsp.
           lyrata] gi|297325593|gb|EFH56013.1| hypothetical protein
           ARALYDRAFT_345641 [Arabidopsis lyrata subsp. lyrata]
          Length = 509

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/80 (47%), Positives = 49/80 (61%)
 Frame = -2

Query: 259 VQAQVKVLQESRDSLLQENQQLMETISYLQSQVQHLEDKCSLSAPSXXXXXXXXXXXAQI 80
           ++AQV  L+ES+ +LL++NQ L ET+S L  QVQH     +    S           +QI
Sbjct: 314 LRAQVTELEESKSNLLEQNQSLKETVSSL--QVQHENHDSNAKGAS------EEELNSQI 365

Query: 79  EPASILVEKLITENAELVQK 20
           E A  LVEKLITENAELV+K
Sbjct: 366 EAACTLVEKLITENAELVEK 385


Top