BLASTX nr result

ID: Coptis25_contig00006387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006387
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17440.3| unnamed protein product [Vitis vinifera]              236   3e-60
ref|XP_002268046.1| PREDICTED: mitochondrial folate transporter/...   229   2e-58
ref|XP_002310276.1| predicted protein [Populus trichocarpa] gi|2...   228   7e-58
ref|XP_002521509.1| folate carrier protein, putative [Ricinus co...   228   9e-58
ref|XP_003547957.1| PREDICTED: mitochondrial folate transporter/...   225   6e-57

>emb|CBI17440.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  236 bits (602), Expect = 3e-60
 Identities = 117/167 (70%), Positives = 137/167 (82%), Gaps = 1/167 (0%)
 Frame = +1

Query: 1   RPYSGFNDALRTIVKEEGWRALYRGMAPSLLLQVSHGAIQFTVYEELRQIAVGFKSKNKT 180
           RPYSG  DALRTI+KEEGW ALYRG+APSL LQVSHGA+QF VYEELR+  V FK K   
Sbjct: 142 RPYSGLYDALRTILKEEGWSALYRGIAPSLFLQVSHGAVQFMVYEELRKFVVEFKCKESN 201

Query: 181 SHPNGD-KVLNSVDFAVLGAASKFSAMLFTYPYQVIRARLQQRPSTIGNHKYKDSWHVLK 357
            +   D K+L+SVD+AVLGA+SK +A+L TYP+QVIRARLQQRP+  G  +Y DSWHV+K
Sbjct: 202 KNLGSDAKLLDSVDYAVLGASSKLAAILMTYPFQVIRARLQQRPNRDGIPRYMDSWHVVK 261

Query: 358 DTVRFEGFRGFYKGITPNLLKNVPASSITFVVYENVLKLLTRSRRKD 498
           +T RFEGFRGFYKGITP++LKN+PA+SITFVVYENVL LL   RR D
Sbjct: 262 ETARFEGFRGFYKGITPSILKNLPAASITFVVYENVLNLLRLKRRND 308



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 48/164 (29%), Positives = 70/164 (42%)
 Frame = +1

Query: 7   YSGFNDALRTIVKEEGWRALYRGMAPSLLLQVSHGAIQFTVYEELRQIAVGFKSKNKTSH 186
           Y     A+ TI + EG R LY G  P++L       + F  Y   +Q      SKN T  
Sbjct: 46  YKNTAHAIFTITRLEGLRGLYAGFYPAVLGSTVSWGLYFFFYGRAKQRY----SKNGTQK 101

Query: 187 PNGDKVLNSVDFAVLGAASKFSAMLFTYPYQVIRARLQQRPSTIGNHKYKDSWHVLKDTV 366
            +    L S   A  GA       L T P  VI+ RLQ          Y   +  L+  +
Sbjct: 102 LSPGLHLASA--AEAGAL----VSLCTNPIWVIKTRLQLETPLHQTRPYSGLYDALRTIL 155

Query: 367 RFEGFRGFYKGITPNLLKNVPASSITFVVYENVLKLLTRSRRKD 498
           + EG+   Y+GI P+L   V   ++ F+VYE + K +   + K+
Sbjct: 156 KEEGWSALYRGIAPSLFLQVSHGAVQFMVYEELRKFVVEFKCKE 199


>ref|XP_002268046.1| PREDICTED: mitochondrial folate transporter/carrier-like [Vitis
           vinifera]
          Length = 312

 Score =  229 bits (585), Expect = 2e-58
 Identities = 116/167 (69%), Positives = 136/167 (81%), Gaps = 1/167 (0%)
 Frame = +1

Query: 1   RPYSGFNDALRTIVKEEGWRALYRGMAPSLLLQVSHGAIQFTVYEELRQIAVGFKSKNKT 180
           RPYSG  DALRTI+KEEGW ALYRG+APSL L VSHGA+QF VYEELR+  V FK K   
Sbjct: 147 RPYSGLYDALRTILKEEGWSALYRGIAPSLFL-VSHGAVQFMVYEELRKFVVEFKCKESN 205

Query: 181 SHPNGD-KVLNSVDFAVLGAASKFSAMLFTYPYQVIRARLQQRPSTIGNHKYKDSWHVLK 357
            +   D K+L+SVD+AVLGA+SK +A+L TYP+QVIRARLQQRP+  G  +Y DSWHV+K
Sbjct: 206 KNLGSDAKLLDSVDYAVLGASSKLAAILMTYPFQVIRARLQQRPNRDGIPRYMDSWHVVK 265

Query: 358 DTVRFEGFRGFYKGITPNLLKNVPASSITFVVYENVLKLLTRSRRKD 498
           +T RFEGFRGFYKGITP++LKN+PA+SITFVVYENVL LL   RR D
Sbjct: 266 ETARFEGFRGFYKGITPSILKNLPAASITFVVYENVLNLLRLKRRND 312


>ref|XP_002310276.1| predicted protein [Populus trichocarpa] gi|222853179|gb|EEE90726.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  228 bits (581), Expect = 7e-58
 Identities = 112/168 (66%), Positives = 134/168 (79%), Gaps = 2/168 (1%)
 Frame = +1

Query: 1   RPYSGFNDALRTIVKEEGWRALYRGMAPSLLLQVSHGAIQFTVYEELRQIAVGFKSKNKT 180
           R YSGF DAL+TI++EEGWRALY+G+ PSL L VSHGA+QFT YEELR++ V +K+K + 
Sbjct: 144 RRYSGFYDALKTIMREEGWRALYKGIVPSLFLVVSHGAVQFTAYEELRKVIVDYKAKQRK 203

Query: 181 SHPNG--DKVLNSVDFAVLGAASKFSAMLFTYPYQVIRARLQQRPSTIGNHKYKDSWHVL 354
                    +LNSVD+AVLG +SK +A++ TYP+QVIR+RLQQRPS  G  +Y DSWHV+
Sbjct: 204 EDCKSADTDLLNSVDYAVLGGSSKIAAIILTYPFQVIRSRLQQRPSMEGIPRYMDSWHVM 263

Query: 355 KDTVRFEGFRGFYKGITPNLLKNVPASSITFVVYENVLKLLTRSRRKD 498
           K T RFEGFRGFYKGITPNLLKNVPASSITF+VYENVLKLL   R  D
Sbjct: 264 KATARFEGFRGFYKGITPNLLKNVPASSITFIVYENVLKLLKLGRTSD 311



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 4/188 (2%)
 Frame = +1

Query: 7   YSGFNDALRTIVKEEGWRALYRGMAPSLLLQVSHGAIQFTVYEELRQIAVGFKSKNKTSH 186
           Y     A+  I + EG + LY G  P++L       + F  Y          ++K + S 
Sbjct: 48  YKNTAHAILNIARLEGLKGLYAGFFPAVLGSTVSWGLYFFFYS---------RAKQRYSK 98

Query: 187 PNGDKVLNSVDFAVLGAASKFSAMLF-TYPYQVIRARLQQRPSTIGNHKYKDSWHVLKDT 363
              +K+   +  A   AA   + + F T P  +++ RLQ +       +Y   +  LK  
Sbjct: 99  NRDEKLSPGLHLA--SAAEAGALVCFCTNPIWLVKTRLQLQNPLHQTRRYSGFYDALKTI 156

Query: 364 VRFEGFRGFYKGITPNLLKNVPASSITFVVYENVLKLLT---RSRRKDDXXXXXXXXXXX 534
           +R EG+R  YKGI P+L   V   ++ F  YE + K++      +RK+D           
Sbjct: 157 MREEGWRALYKGIVPSLFLVVSHGAVQFTAYEELRKVIVDYKAKQRKEDCKSADTDLLNS 216

Query: 535 XXYNCFGG 558
             Y   GG
Sbjct: 217 VDYAVLGG 224


>ref|XP_002521509.1| folate carrier protein, putative [Ricinus communis]
           gi|223539187|gb|EEF40780.1| folate carrier protein,
           putative [Ricinus communis]
          Length = 314

 Score =  228 bits (580), Expect = 9e-58
 Identities = 115/168 (68%), Positives = 138/168 (82%), Gaps = 2/168 (1%)
 Frame = +1

Query: 1   RPYSGFNDALRTIVKEEGWRALYRGMAPSLLLQVSHGAIQFTVYEELRQIAVGFKSKNKT 180
           +PYSG  DAL+TI++EEGW ALY+G+ P L L VSHGAIQFT YEELR+I +  KSK++ 
Sbjct: 148 QPYSGLYDALKTIMREEGWSALYKGIVPGLFL-VSHGAIQFTAYEELRKIIIDHKSKDRE 206

Query: 181 S-HPNGD-KVLNSVDFAVLGAASKFSAMLFTYPYQVIRARLQQRPSTIGNHKYKDSWHVL 354
           S H + D  +LNSVD+AVLG +SK +A++ TYP+QVIRARLQQRPS  G  KY DSWHV+
Sbjct: 207 SNHKSSDINLLNSVDYAVLGGSSKVAAIILTYPFQVIRARLQQRPSMNGVPKYMDSWHVV 266

Query: 355 KDTVRFEGFRGFYKGITPNLLKNVPASSITFVVYENVLKLLTRSRRKD 498
           K+T RFEG RGFYKGITPNLLKNVPA+SITF+VYENVLKLL  +RR D
Sbjct: 267 KETARFEGLRGFYKGITPNLLKNVPAASITFIVYENVLKLLKLTRRND 314



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/164 (26%), Positives = 68/164 (41%)
 Frame = +1

Query: 7   YSGFNDALRTIVKEEGWRALYRGMAPSLLLQVSHGAIQFTVYEELRQIAVGFKSKNKTSH 186
           Y     A+ +I + EG + LY G  PS+L       + F  Y          ++K + S 
Sbjct: 52  YKNTAQAILSITRFEGLKGLYAGFLPSVLGSTVSWGLYFFFYG---------RAKQRYSK 102

Query: 187 PNGDKVLNSVDFAVLGAASKFSAMLFTYPYQVIRARLQQRPSTIGNHKYKDSWHVLKDTV 366
              +K+   +  A    A      L T P  +++ R+Q +        Y   +  LK  +
Sbjct: 103 NRDEKLSPGLHLASAAEAGAL-VCLCTNPIWLVKTRMQLQTPLHQIQPYSGLYDALKTIM 161

Query: 367 RFEGFRGFYKGITPNLLKNVPASSITFVVYENVLKLLTRSRRKD 498
           R EG+   YKGI P L   V   +I F  YE + K++   + KD
Sbjct: 162 REEGWSALYKGIVPGLFL-VSHGAIQFTAYEELRKIIIDHKSKD 204


>ref|XP_003547957.1| PREDICTED: mitochondrial folate transporter/carrier-like [Glycine
           max]
          Length = 314

 Score =  225 bits (573), Expect = 6e-57
 Identities = 116/167 (69%), Positives = 134/167 (80%), Gaps = 1/167 (0%)
 Frame = +1

Query: 1   RPYSGFNDALRTIVKEEGWRALYRGMAPSLLLQVSHGAIQFTVYEELRQIAVGFKSKNKT 180
           RPYSG  DA RTI++EEG+ ALY+G+ P L L VSHGAIQFT YEELR++ V FKSK  T
Sbjct: 149 RPYSGVYDAFRTIMREEGFSALYKGIVPGLFL-VSHGAIQFTAYEELRKVIVDFKSKGST 207

Query: 181 SH-PNGDKVLNSVDFAVLGAASKFSAMLFTYPYQVIRARLQQRPSTIGNHKYKDSWHVLK 357
            H  N DK+LNSVD+AVLGA SK +A+L TYP+QVIRARLQQRPS  G  +Y D+ HV+K
Sbjct: 208 VHNQNPDKLLNSVDYAVLGATSKLAAVLLTYPFQVIRARLQQRPSGDGVPRYMDTLHVVK 267

Query: 358 DTVRFEGFRGFYKGITPNLLKNVPASSITFVVYENVLKLLTRSRRKD 498
           +T RFEG RGFYKGIT NLLKN PASSITF+VYENVLKLL  +RR D
Sbjct: 268 ETARFEGIRGFYKGITANLLKNAPASSITFIVYENVLKLLKPARRND 314



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 44/163 (26%), Positives = 67/163 (41%)
 Frame = +1

Query: 7   YSGFNDALRTIVKEEGWRALYRGMAPSLLLQVSHGAIQFTVYEELRQIAVGFKSKNKTSH 186
           Y     A+  I + EG R LY G  P +L       + F  Y+  +Q     +++ +   
Sbjct: 53  YKNTAHAVFAIARSEGLRGLYAGFLPGVLGSTISWGLYFFFYDRAKQRYA--RNREEKLS 110

Query: 187 PNGDKVLNSVDFAVLGAASKFSAMLFTYPYQVIRARLQQRPSTIGNHKYKDSWHVLKDTV 366
           P     L+    A  GA   F    FT P  +++ RLQ +        Y   +   +  +
Sbjct: 111 PG----LHLASAAEAGALVSF----FTNPVWLVKTRLQLQTPLHQTRPYSGVYDAFRTIM 162

Query: 367 RFEGFRGFYKGITPNLLKNVPASSITFVVYENVLKLLTRSRRK 495
           R EGF   YKGI P L   V   +I F  YE + K++   + K
Sbjct: 163 REEGFSALYKGIVPGLFL-VSHGAIQFTAYEELRKVIVDFKSK 204


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