BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006377
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris...   439   e-121
gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris...   439   e-121
ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8...   437   e-120
ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8...   434   e-119
ref|XP_002524566.1| chlorophyll A/B binding protein, putative [R...   434   e-119

>gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  439 bits (1130), Expect = e-121
 Identities = 216/261 (82%), Positives = 227/261 (86%), Gaps = 6/261 (2%)
 Frame = +3

Query: 213 RQVFGGRVVVPT------SIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPG 374
           RQ+ GGR V  T      S RK+SF VKAA+TPPVKQGADR LWFASKQSLSYL+GSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 375 DYGFDPLGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETAL 554
           D+GFDPLGLSDPEGTGGFIEP WLAYGE+INGRYAMLG  GAIAPEI GKLGLIP ETAL
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 555 PWFQTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGFEKYL 734
           PWFQTGVIPPAGTY+YWADPYTLFV EMALMGFAEHRRFQDWAKPG MGKQYFLGFEK+L
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194

Query: 735 GGSGNPIYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQ 914
           GGSG+P Y            KDEKS+ ELKLKEVKNGRLAMLAILG+FIQGLVTGVGPFQ
Sbjct: 195 GGSGDPAYPGGPIFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQ 254

Query: 915 NLLDHLADPVNNNVLTSLKFH 977
           NLLDHLADPVNNNVLTSLKFH
Sbjct: 255 NLLDHLADPVNNNVLTSLKFH 275


>gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  439 bits (1129), Expect = e-121
 Identities = 216/261 (82%), Positives = 228/261 (87%), Gaps = 6/261 (2%)
 Frame = +3

Query: 213 RQVFGGRVV--VPT----SIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPG 374
           RQ+ GGR V   PT    S RK+SF VKAA+TPPVKQGADR LWFASKQSLSYL+GSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 375 DYGFDPLGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETAL 554
           D+GFDPLGLSDPEGTGGFIEP WLAYGE+INGRYAMLG  GAIAPEI GKLGLIP ETAL
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 555 PWFQTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGFEKYL 734
           PWFQTGVIPPAGTY+YWADPYTLFV EMALMGFAEHRRFQDWAKPG MGKQYFLGFEK+L
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194

Query: 735 GGSGNPIYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQ 914
           GGSG+P Y            KDE+S+ ELKLKEVKNGRLAMLAILG+FIQGLVTGVGPFQ
Sbjct: 195 GGSGDPAYPGGPIFNPLGFGKDERSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQ 254

Query: 915 NLLDHLADPVNNNVLTSLKFH 977
           NLLDHLADPVNNNVLTSLKFH
Sbjct: 255 NLLDHLADPVNNNVLTSLKFH 275


>ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis
           vinifera]
          Length = 274

 Score =  437 bits (1124), Expect = e-120
 Identities = 210/255 (82%), Positives = 222/255 (87%)
 Frame = +3

Query: 213 RQVFGGRVVVPTSIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPGDYGFDP 392
           RQ+ G R +   S + SSF V+AA+TPPVKQGADRPLWFASKQSL+YL+GSLPGDYGFDP
Sbjct: 19  RQILGSRPLQSPSRKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGDYGFDP 78

Query: 393 LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 572
           LGLSDPEGTGGFIEP WLAYGEVINGRYAMLGAVGAIAPEI GKLGLIP ETALPWF+TG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALPWFKTG 138

Query: 573 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGFEKYLGGSGNP 752
           V PPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PG MGKQYFLG EKYLGGSG+P
Sbjct: 139 VFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGDP 198

Query: 753 IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 932
            Y            KDEKSL +LKLKEVKNGRLAMLAILGYF QG VTGVGP QNLLDHL
Sbjct: 199 AYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFAQGPVTGVGPLQNLLDHL 258

Query: 933 ADPVNNNVLTSLKFH 977
           ADPVNNN++TSLKFH
Sbjct: 259 ADPVNNNIITSLKFH 273


>ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
           [Cucumis sativus] gi|449532766|ref|XP_004173351.1|
           PREDICTED: chlorophyll a-b binding protein 8,
           chloroplastic-like [Cucumis sativus]
          Length = 273

 Score =  434 bits (1116), Expect = e-119
 Identities = 209/255 (81%), Positives = 223/255 (87%)
 Frame = +3

Query: 213 RQVFGGRVVVPTSIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPGDYGFDP 392
           RQ  G R    +S + +SF V+A ATPPVKQGADR LWFASKQSLSYL+GSLPGD+GFDP
Sbjct: 19  RQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDP 78

Query: 393 LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 572
           LGLSDPEGTGGFIEP WLAYGEVINGR+AMLGA GAIAPEIFG LGLIP ETALPWF+TG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTG 138

Query: 573 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGFEKYLGGSGNP 752
           VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPG MGKQYFLG EK+LGGSG+P
Sbjct: 139 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDP 198

Query: 753 IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 932
            Y            KDEKS+ ELKLKE+KNGRLAMLAILGYFIQGLVTGVGP+QNLLDHL
Sbjct: 199 AYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL 258

Query: 933 ADPVNNNVLTSLKFH 977
           +DPVNNNVLTSLKFH
Sbjct: 259 SDPVNNNVLTSLKFH 273


>ref|XP_002524566.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223536119|gb|EEF37774.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 273

 Score =  434 bits (1116), Expect = e-119
 Identities = 207/255 (81%), Positives = 224/255 (87%)
 Frame = +3

Query: 213 RQVFGGRVVVPTSIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPGDYGFDP 392
           RQ+ G R    +S + SSF V+A++TPPVKQGADR LWFASKQSL+YL+GSLPGD+GFDP
Sbjct: 19  RQILGARSSFGSSRKSSSFVVRASSTPPVKQGADRQLWFASKQSLTYLDGSLPGDFGFDP 78

Query: 393 LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 572
           LGLSDPEGTGGFIEP WLAYGE+INGR+AMLGA GAIAPEI GK GLIP ETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 138

Query: 573 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGFEKYLGGSGNP 752
           VIPPAGTY+YWADPYTLFVFEMALMGFAEHRRFQDWAKPG MGKQYFLG EK+LGGSG+P
Sbjct: 139 VIPPAGTYDYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDP 198

Query: 753 IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 932
            Y            KDEKS+ ELKLKEVKNGRLAMLAILGYF+QGLVTGVGP+QNLLDHL
Sbjct: 199 AYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL 258

Query: 933 ADPVNNNVLTSLKFH 977
           ADPVNNNVLTSLKFH
Sbjct: 259 ADPVNNNVLTSLKFH 273