BLASTX nr result
ID: Coptis25_contig00006377
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006377 (1027 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris... 439 e-121 gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris... 439 e-121 ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8... 437 e-120 ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8... 434 e-119 ref|XP_002524566.1| chlorophyll A/B binding protein, putative [R... 434 e-119 >gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea] Length = 275 Score = 439 bits (1130), Expect = e-121 Identities = 216/261 (82%), Positives = 227/261 (86%), Gaps = 6/261 (2%) Frame = +3 Query: 213 RQVFGGRVVVPT------SIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPG 374 RQ+ GGR V T S RK+SF VKAA+TPPVKQGADR LWFASKQSLSYL+GSLPG Sbjct: 15 RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74 Query: 375 DYGFDPLGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETAL 554 D+GFDPLGLSDPEGTGGFIEP WLAYGE+INGRYAMLG GAIAPEI GKLGLIP ETAL Sbjct: 75 DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134 Query: 555 PWFQTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGFEKYL 734 PWFQTGVIPPAGTY+YWADPYTLFV EMALMGFAEHRRFQDWAKPG MGKQYFLGFEK+L Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194 Query: 735 GGSGNPIYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQ 914 GGSG+P Y KDEKS+ ELKLKEVKNGRLAMLAILG+FIQGLVTGVGPFQ Sbjct: 195 GGSGDPAYPGGPIFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQ 254 Query: 915 NLLDHLADPVNNNVLTSLKFH 977 NLLDHLADPVNNNVLTSLKFH Sbjct: 255 NLLDHLADPVNNNVLTSLKFH 275 >gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea] Length = 275 Score = 439 bits (1129), Expect = e-121 Identities = 216/261 (82%), Positives = 228/261 (87%), Gaps = 6/261 (2%) Frame = +3 Query: 213 RQVFGGRVV--VPT----SIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPG 374 RQ+ GGR V PT S RK+SF VKAA+TPPVKQGADR LWFASKQSLSYL+GSLPG Sbjct: 15 RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74 Query: 375 DYGFDPLGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETAL 554 D+GFDPLGLSDPEGTGGFIEP WLAYGE+INGRYAMLG GAIAPEI GKLGLIP ETAL Sbjct: 75 DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134 Query: 555 PWFQTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGFEKYL 734 PWFQTGVIPPAGTY+YWADPYTLFV EMALMGFAEHRRFQDWAKPG MGKQYFLGFEK+L Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194 Query: 735 GGSGNPIYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQ 914 GGSG+P Y KDE+S+ ELKLKEVKNGRLAMLAILG+FIQGLVTGVGPFQ Sbjct: 195 GGSGDPAYPGGPIFNPLGFGKDERSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQ 254 Query: 915 NLLDHLADPVNNNVLTSLKFH 977 NLLDHLADPVNNNVLTSLKFH Sbjct: 255 NLLDHLADPVNNNVLTSLKFH 275 >ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis vinifera] Length = 274 Score = 437 bits (1124), Expect = e-120 Identities = 210/255 (82%), Positives = 222/255 (87%) Frame = +3 Query: 213 RQVFGGRVVVPTSIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPGDYGFDP 392 RQ+ G R + S + SSF V+AA+TPPVKQGADRPLWFASKQSL+YL+GSLPGDYGFDP Sbjct: 19 RQILGSRPLQSPSRKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGDYGFDP 78 Query: 393 LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 572 LGLSDPEGTGGFIEP WLAYGEVINGRYAMLGAVGAIAPEI GKLGLIP ETALPWF+TG Sbjct: 79 LGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALPWFKTG 138 Query: 573 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGFEKYLGGSGNP 752 V PPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PG MGKQYFLG EKYLGGSG+P Sbjct: 139 VFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGDP 198 Query: 753 IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 932 Y KDEKSL +LKLKEVKNGRLAMLAILGYF QG VTGVGP QNLLDHL Sbjct: 199 AYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFAQGPVTGVGPLQNLLDHL 258 Query: 933 ADPVNNNVLTSLKFH 977 ADPVNNN++TSLKFH Sbjct: 259 ADPVNNNIITSLKFH 273 >ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like [Cucumis sativus] gi|449532766|ref|XP_004173351.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like [Cucumis sativus] Length = 273 Score = 434 bits (1116), Expect = e-119 Identities = 209/255 (81%), Positives = 223/255 (87%) Frame = +3 Query: 213 RQVFGGRVVVPTSIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPGDYGFDP 392 RQ G R +S + +SF V+A ATPPVKQGADR LWFASKQSLSYL+GSLPGD+GFDP Sbjct: 19 RQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDP 78 Query: 393 LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 572 LGLSDPEGTGGFIEP WLAYGEVINGR+AMLGA GAIAPEIFG LGLIP ETALPWF+TG Sbjct: 79 LGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTG 138 Query: 573 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGFEKYLGGSGNP 752 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPG MGKQYFLG EK+LGGSG+P Sbjct: 139 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDP 198 Query: 753 IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 932 Y KDEKS+ ELKLKE+KNGRLAMLAILGYFIQGLVTGVGP+QNLLDHL Sbjct: 199 AYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL 258 Query: 933 ADPVNNNVLTSLKFH 977 +DPVNNNVLTSLKFH Sbjct: 259 SDPVNNNVLTSLKFH 273 >ref|XP_002524566.1| chlorophyll A/B binding protein, putative [Ricinus communis] gi|223536119|gb|EEF37774.1| chlorophyll A/B binding protein, putative [Ricinus communis] Length = 273 Score = 434 bits (1116), Expect = e-119 Identities = 207/255 (81%), Positives = 224/255 (87%) Frame = +3 Query: 213 RQVFGGRVVVPTSIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPGDYGFDP 392 RQ+ G R +S + SSF V+A++TPPVKQGADR LWFASKQSL+YL+GSLPGD+GFDP Sbjct: 19 RQILGARSSFGSSRKSSSFVVRASSTPPVKQGADRQLWFASKQSLTYLDGSLPGDFGFDP 78 Query: 393 LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 572 LGLSDPEGTGGFIEP WLAYGE+INGR+AMLGA GAIAPEI GK GLIP ETALPWFQTG Sbjct: 79 LGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 138 Query: 573 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGFEKYLGGSGNP 752 VIPPAGTY+YWADPYTLFVFEMALMGFAEHRRFQDWAKPG MGKQYFLG EK+LGGSG+P Sbjct: 139 VIPPAGTYDYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDP 198 Query: 753 IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 932 Y KDEKS+ ELKLKEVKNGRLAMLAILGYF+QGLVTGVGP+QNLLDHL Sbjct: 199 AYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL 258 Query: 933 ADPVNNNVLTSLKFH 977 ADPVNNNVLTSLKFH Sbjct: 259 ADPVNNNVLTSLKFH 273