BLASTX nr result

ID: Coptis25_contig00006366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006366
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69808.1| hypothetical protein VITISV_019656 [Vitis vinifera]   305   8e-81
ref|XP_002284835.1| PREDICTED: uncharacterized endoplasmic retic...   304   2e-80
ref|XP_002311311.1| predicted protein [Populus trichocarpa] gi|2...   289   6e-76
gb|AFK42535.1| unknown [Medicago truncatula]                          286   3e-75
gb|ABK94463.1| unknown [Populus trichocarpa]                          286   5e-75

>emb|CAN69808.1| hypothetical protein VITISV_019656 [Vitis vinifera]
          Length = 202

 Score =  305 bits (781), Expect = 8e-81
 Identities = 145/202 (71%), Positives = 164/202 (81%), Gaps = 7/202 (3%)
 Frame = +1

Query: 76  MTKTGLFDLEKHFAFYGAYHSNPINIFIHMLFVWPILFTTLVLLYFTPSLFPLPQIG--- 246
           M K GLFDLE+HFAFYGAYHS+P+N+F+HMLFVWP+ FT LVL YFTPS F LPQIG   
Sbjct: 1   MGKMGLFDLERHFAFYGAYHSBPVNVFLHMLFVWPLFFTALVLFYFTPSFFILPQIGLLP 60

Query: 247 ----GNLVFNLGFIFTLVYSLFYIALDVKAGSLAAALCFLSWVGGSLLANHLGYSLAWKV 414
                  + N GF+FTL+YSLFY+ LD KAG LAA LCF  WVG S LA++LG+SLAWKV
Sbjct: 61  SGFNHTFLLNFGFLFTLIYSLFYVLLDKKAGCLAALLCFSCWVGSSFLASYLGFSLAWKV 120

Query: 415 VLAAQVFCWIGQFIGHGVFEKRAPALLDNLTQAFVMAPFFVLLEALQMFCGYEPYPGFHA 594
           VLA+Q+FCW GQFIGHGVFEKRAPALLDNL QAF+MAPFFVLLEALQ   GYEPYPGF  
Sbjct: 121 VLASQLFCWTGQFIGHGVFEKRAPALLDNLAQAFIMAPFFVLLEALQTTIGYEPYPGFSK 180

Query: 595 RVKAKIDSEIKEFRDKKQKKIS 660
            VK KI ++IKE+ DKKQKKIS
Sbjct: 181 NVKEKIGADIKEWHDKKQKKIS 202


>ref|XP_002284835.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein
           C16E8.02-like [Vitis vinifera]
          Length = 202

 Score =  304 bits (778), Expect = 2e-80
 Identities = 145/202 (71%), Positives = 164/202 (81%), Gaps = 7/202 (3%)
 Frame = +1

Query: 76  MTKTGLFDLEKHFAFYGAYHSNPINIFIHMLFVWPILFTTLVLLYFTPSLFPLPQIG--- 246
           M K GLFDLE+HFAFYGAYHS+P+N+F+HMLFVWP+ FT LVL YFTPS F LPQIG   
Sbjct: 1   MGKMGLFDLERHFAFYGAYHSDPVNVFLHMLFVWPLFFTALVLFYFTPSFFILPQIGLLP 60

Query: 247 ----GNLVFNLGFIFTLVYSLFYIALDVKAGSLAAALCFLSWVGGSLLANHLGYSLAWKV 414
                  + N GF+FTL+YSLFY+ LD KAG LAA LCF  WVG S LA++LG+SLAWKV
Sbjct: 61  SGFNHTFLLNFGFLFTLIYSLFYVLLDKKAGCLAALLCFSCWVGSSFLASYLGFSLAWKV 120

Query: 415 VLAAQVFCWIGQFIGHGVFEKRAPALLDNLTQAFVMAPFFVLLEALQMFCGYEPYPGFHA 594
           VLA+Q+FCW GQFIGHGVFEKRAPALLDNL QAF+MAPFFVLLEALQ   GYEPYPGF  
Sbjct: 121 VLASQLFCWTGQFIGHGVFEKRAPALLDNLAQAFIMAPFFVLLEALQTTIGYEPYPGFSK 180

Query: 595 RVKAKIDSEIKEFRDKKQKKIS 660
            VK KI ++IKE+ DKKQKKIS
Sbjct: 181 NVKEKIGADIKEWHDKKQKKIS 202


>ref|XP_002311311.1| predicted protein [Populus trichocarpa] gi|222851131|gb|EEE88678.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  289 bits (739), Expect = 6e-76
 Identities = 141/199 (70%), Positives = 158/199 (79%), Gaps = 7/199 (3%)
 Frame = +1

Query: 76  MTKTGLFDLEKHFAFYGAYHSNPINIFIHMLFVWPILFTTLVLLYFTPSLFPLPQI---- 243
           M K GL DLEKHFAFYGAYHSN INI IHM+FVWPI FT  ++LYFTP LF LPQ+    
Sbjct: 1   MGKYGLIDLEKHFAFYGAYHSNSINILIHMIFVWPIFFTACLILYFTPPLFSLPQVQLSL 60

Query: 244 ---GGNLVFNLGFIFTLVYSLFYIALDVKAGSLAAALCFLSWVGGSLLANHLGYSLAWKV 414
              G  L+FN+GF   L+Y+LFYI LD KAGSLAA LC   WV  SL+A  LG+SLAWKV
Sbjct: 61  FGYGVVLLFNVGFFLVLIYALFYICLDPKAGSLAALLCAFCWVASSLVAGWLGFSLAWKV 120

Query: 415 VLAAQVFCWIGQFIGHGVFEKRAPALLDNLTQAFVMAPFFVLLEALQMFCGYEPYPGFHA 594
           VL AQ+ CW GQFIGHGVFEKRAPALLDNL QAF+MAPFFVLLEALQ   GYEPYPGFHA
Sbjct: 121 VLVAQIVCWTGQFIGHGVFEKRAPALLDNLIQAFIMAPFFVLLEALQTSFGYEPYPGFHA 180

Query: 595 RVKAKIDSEIKEFRDKKQK 651
            V+A+ID+EIKE+R+KK K
Sbjct: 181 SVQARIDAEIKEWREKKLK 199


>gb|AFK42535.1| unknown [Medicago truncatula]
          Length = 197

 Score =  286 bits (733), Expect = 3e-75
 Identities = 137/196 (69%), Positives = 158/196 (80%), Gaps = 5/196 (2%)
 Frame = +1

Query: 88  GLFDLEKHFAFYGAYHSNPINIFIHMLFVWPILFTTLVLLYFTPSLFPLPQIGGN----- 252
           GL D EKHFAFYG+YHSNP NI IH+LFVWPILFT+L+ LYFTP LF   Q   N     
Sbjct: 2   GLLDQEKHFAFYGSYHSNPTNIIIHILFVWPILFTSLIFLYFTPPLFSPSQTVLNFTHPV 61

Query: 253 LVFNLGFIFTLVYSLFYIALDVKAGSLAAALCFLSWVGGSLLANHLGYSLAWKVVLAAQV 432
           L+FNLGF+F + Y LFY ALD+KAGS  A L FLSWVG S +AN +GY LAWKVVLAAQ+
Sbjct: 62  LIFNLGFVFAVFYGLFYAALDIKAGSFTAVLTFLSWVGASFVANSIGYELAWKVVLAAQL 121

Query: 433 FCWIGQFIGHGVFEKRAPALLDNLTQAFVMAPFFVLLEALQMFCGYEPYPGFHARVKAKI 612
           FCW GQFIGHGVFEKRAPALLDNL QAF+MAPFFV+LE LQ   GYEPYPGF  +V+A+I
Sbjct: 122 FCWTGQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEILQSSIGYEPYPGFQKKVQARI 181

Query: 613 DSEIKEFRDKKQKKIS 660
           D+ IKE+++K+QKKIS
Sbjct: 182 DANIKEWKEKQQKKIS 197


>gb|ABK94463.1| unknown [Populus trichocarpa]
          Length = 203

 Score =  286 bits (731), Expect = 5e-75
 Identities = 140/203 (68%), Positives = 159/203 (78%), Gaps = 8/203 (3%)
 Frame = +1

Query: 76  MTKTGLFDLEKHFAFYGAYHSNPINIFIHMLFVWPILFTTLVLLYFTPSLFPLPQI---- 243
           M K GLFDLEKH+AFYGAYHSNPINI IHM+FVWPI F + ++LYFTP LF LPQ+    
Sbjct: 1   MGKYGLFDLEKHYAFYGAYHSNPINILIHMIFVWPIFFASSLILYFTPPLFNLPQVELSL 60

Query: 244 -GGN---LVFNLGFIFTLVYSLFYIALDVKAGSLAAALCFLSWVGGSLLANHLGYSLAWK 411
            G N   L  N+GF   L+Y+LFYI LD KAGSLAA  C   WV    +A+ LG+SLAWK
Sbjct: 61  FGSNDVVLFLNIGFFLVLIYALFYICLDPKAGSLAALFCGFCWVSSCFVASWLGFSLAWK 120

Query: 412 VVLAAQVFCWIGQFIGHGVFEKRAPALLDNLTQAFVMAPFFVLLEALQMFCGYEPYPGFH 591
           VVL AQ+ CW GQFIGHGVFEKRAPALLDNL QAFVMAPFFVLLEALQ   GYEPYPGFH
Sbjct: 121 VVLVAQIICWTGQFIGHGVFEKRAPALLDNLVQAFVMAPFFVLLEALQTSFGYEPYPGFH 180

Query: 592 ARVKAKIDSEIKEFRDKKQKKIS 660
           A V+AKID+EIKE+++KK K +S
Sbjct: 181 ASVQAKIDAEIKEWKEKKLKLLS 203


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