BLASTX nr result

ID: Coptis25_contig00006360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006360
         (1514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330540.1| predicted protein [Populus trichocarpa] gi|1...   626   e-177
ref|XP_002530617.1| DNA-damage inducible protein ddi1, putative ...   623   e-176
ref|XP_002300577.1| predicted protein [Populus trichocarpa] gi|2...   621   e-175
ref|XP_002276099.1| PREDICTED: DNA damage-inducible protein 1 [V...   614   e-173
gb|AEW69812.1| Hop-interacting protein THI111 [Solanum lycopersi...   613   e-173

>ref|XP_002330540.1| predicted protein [Populus trichocarpa] gi|118486011|gb|ABK94849.1|
            unknown [Populus trichocarpa] gi|222872098|gb|EEF09229.1|
            predicted protein [Populus trichocarpa]
          Length = 410

 Score =  626 bits (1614), Expect = e-177
 Identities = 316/413 (76%), Positives = 366/413 (88%), Gaps = 1/413 (0%)
 Frame = -3

Query: 1479 MKLTVMTADEQFITLDVDPEESVENLKALLEVETRVPLEQQQLVFNGNEMTNEKRLSGIG 1300
            M++TVMTADEQ I+L+VDP ESVEN+KALLEVET+VPL+QQQL++NG EM N ++LS +G
Sbjct: 1    MRITVMTADEQIISLEVDPHESVENVKALLEVETQVPLQQQQLLYNGREMRNNEKLSALG 60

Query: 1299 IKDGDLVMMMISNASSNRAPASDLRFDPDGSAVNPGAFQQHVRNNSNMISQLLQNDPEFA 1120
            +KD DLVMM +SNA++  AP+++L  +PDGSA+NPGAFQQ +RN+SN ++QL Q DPE A
Sbjct: 61   VKDEDLVMM-VSNAAALSAPSNNLGLNPDGSAMNPGAFQQQLRNDSNTMAQLFQADPELA 119

Query: 1119 QAILGNDLNRLQQILRERHQQRSELQRKQEEEMALLDADPFDVEAQRKIEAAIRQKGINE 940
            Q ILGNDLN+LQ +LR+RH+QRSEL R+QEEE ALL+ADPFDVEAQ+KIEAAIRQKGI+E
Sbjct: 120  QVILGNDLNKLQDLLRQRHRQRSELHRQQEEEFALLEADPFDVEAQKKIEAAIRQKGIDE 179

Query: 939  NWEAALEYNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDER 760
            NW AALEYNPEAFARV+MLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLD+R
Sbjct: 180  NWAAALEYNPEAFARVIMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQR 239

Query: 759  FKGIAHGVGQTEILGRIHVAPIKIGNVFYHCSFQVLDSPNMEFLFGLDMLRKHQCLIDLK 580
            +KGIAHGVGQ+EILGRIHVAPIKIGN+FY CSF VLDSPNMEFLFGLDMLRKHQC+IDLK
Sbjct: 240  YKGIAHGVGQSEILGRIHVAPIKIGNIFYPCSFMVLDSPNMEFLFGLDMLRKHQCIIDLK 299

Query: 579  DNVLRVGGGEVSVPFLQEKDLPSHFRDEEKYSKNDSGSASE-TSGTKEKNISSIVSTGGQ 403
            +NVLRVGGGEVSVPFLQEKD+P  F DEE+YSK  S S +  TSG  EK   +     GQ
Sbjct: 300  ENVLRVGGGEVSVPFLQEKDIPPRFLDEERYSKEASSSGNPVTSGKAEK--KNDPPAMGQ 357

Query: 402  PSGVAGSGLTQGHDFEAKVSKLVELGFGRDAVLQALRLFNGNEEQAAGFLFGG 244
             SGVA S +TQG DFEAKV+KLVELGFGR+AV+QAL+LF+GNEEQAAGFLFGG
Sbjct: 358  SSGVARSSVTQGPDFEAKVAKLVELGFGREAVIQALKLFDGNEEQAAGFLFGG 410


>ref|XP_002530617.1| DNA-damage inducible protein ddi1, putative [Ricinus communis]
            gi|223529827|gb|EEF31760.1| DNA-damage inducible protein
            ddi1, putative [Ricinus communis]
          Length = 413

 Score =  623 bits (1607), Expect = e-176
 Identities = 311/415 (74%), Positives = 366/415 (88%), Gaps = 3/415 (0%)
 Frame = -3

Query: 1479 MKLTVMTADEQFITLDVDPEESVENLKALLEVETRVPLEQQQLVFNGNEMTNEKRLSGIG 1300
            M++TVMTADEQ I+L+VDP ESVEN+KALLEVET+VPL+QQQL++NG E+ N ++LS +G
Sbjct: 1    MRITVMTADEQIISLEVDPHESVENVKALLEVETQVPLQQQQLLYNGREIRNNEKLSALG 60

Query: 1299 IKDGDLVMMMISNASS---NRAPASDLRFDPDGSAVNPGAFQQHVRNNSNMISQLLQNDP 1129
            +KD DL+MM+    ++   + APA+DL F+ DGSAVNPGAFQQH+RN+SN+++QL Q DP
Sbjct: 61   VKDEDLLMMVSGGGAAVAPSSAPANDLSFNADGSAVNPGAFQQHIRNDSNLMAQLFQTDP 120

Query: 1128 EFAQAILGNDLNRLQQILRERHQQRSELQRKQEEEMALLDADPFDVEAQRKIEAAIRQKG 949
            E AQA+LGNDLNRLQ +LR+R++QRSEL+R+QEEE+ALL ADPFDVEAQ+KIEAAIRQKG
Sbjct: 121  ELAQALLGNDLNRLQGLLRQRNRQRSELRRQQEEELALLSADPFDVEAQKKIEAAIRQKG 180

Query: 948  INENWEAALEYNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLL 769
            I+ENW AALEYNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLL
Sbjct: 181  IDENWAAALEYNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLL 240

Query: 768  DERFKGIAHGVGQTEILGRIHVAPIKIGNVFYHCSFQVLDSPNMEFLFGLDMLRKHQCLI 589
            D+R++GIA GVGQ+EILGRIHVAPIKIG++FY CSF VLDSPNMEFLFGLDMLRKHQC+I
Sbjct: 241  DQRYRGIARGVGQSEILGRIHVAPIKIGSIFYPCSFLVLDSPNMEFLFGLDMLRKHQCII 300

Query: 588  DLKDNVLRVGGGEVSVPFLQEKDLPSHFRDEEKYSKNDSGSASETSGTKEKNISSIVSTG 409
            DLK+NVL+V GGEVSVPFLQEKD+PSHF DEE + +  S     TSGT +K  ++  S G
Sbjct: 301  DLKENVLKVAGGEVSVPFLQEKDIPSHFLDEESHKEASSSGNPVTSGTVDKKANA--SAG 358

Query: 408  GQPSGVAGSGLTQGHDFEAKVSKLVELGFGRDAVLQALRLFNGNEEQAAGFLFGG 244
            GQ SGVA   +TQG DFEAKV+KLVELGFGRDAV+QAL+LF GNEEQAAGFLFGG
Sbjct: 359  GQSSGVARGSVTQGPDFEAKVAKLVELGFGRDAVVQALKLFEGNEEQAAGFLFGG 413


>ref|XP_002300577.1| predicted protein [Populus trichocarpa] gi|222847835|gb|EEE85382.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  621 bits (1601), Expect = e-175
 Identities = 315/421 (74%), Positives = 368/421 (87%), Gaps = 9/421 (2%)
 Frame = -3

Query: 1479 MKLTVMTADEQFITLDVDPEESVENLKALLEVETRVPLEQQQLVFNGNEMTNEKRLSGIG 1300
            M++TVMT  EQ I+L+VDP ESVEN+KALLEVET+VPL+QQQL++NG EM N  +LS +G
Sbjct: 1    MRITVMTVGEQIISLEVDPHESVENVKALLEVETQVPLQQQQLLYNGREMKNNDKLSALG 60

Query: 1299 IKDGDLVMMMISNASSNRAPASDLRFDPDGSAVNPGAFQQHVRNNSNMISQLLQNDPEFA 1120
            +KD DLVMM +SN+++  AP+++L  +PDGSAVNPGAFQQH+R++SN ++QL Q DPE A
Sbjct: 61   VKDEDLVMM-VSNSAAISAPSNNLGLNPDGSAVNPGAFQQHLRSDSNTMAQLFQADPELA 119

Query: 1119 QAILGNDLNRLQQILRERHQQRSELQRKQEEEMALLDADPFDVEAQRKIEAAIRQKGINE 940
            QA+LGNDLN+LQ++LR+RH+QRSEL+R+QEEE ALL+ADPFDVEAQ+KIEAAIRQKGI+E
Sbjct: 120  QAVLGNDLNKLQELLRQRHRQRSELRRQQEEEFALLEADPFDVEAQKKIEAAIRQKGIDE 179

Query: 939  NWEAALEYNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDER 760
            NW AALEYNPEAFARV+MLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLD+R
Sbjct: 180  NWAAALEYNPEAFARVIMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQR 239

Query: 759  FKGIAHGVGQTEILGRIHVAPIKIGNVFYHCSFQVLDSPNMEFLFGLDMLRKHQCLIDLK 580
            +KGIAHGVGQ+EILGRIHVAPIKIGN+FY CSF VLD+PNMEFLFGLDMLRKHQC+IDLK
Sbjct: 240  YKGIAHGVGQSEILGRIHVAPIKIGNIFYPCSFMVLDAPNMEFLFGLDMLRKHQCIIDLK 299

Query: 579  DNVLRVGGGEVSVPFLQEKDLPSHFRDEEKYSKNDSGSASE-TSGTKEKNISSIVSTGGQ 403
            +NVLR+GGGEVSVPFLQEKD+PS F DEE+YSK  S S +  TSGT  K   +    GGQ
Sbjct: 300  ENVLRMGGGEVSVPFLQEKDIPSRFLDEERYSKEASSSGNPVTSGTTVK--KNDPPAGGQ 357

Query: 402  PSGVAGSGLT--------QGHDFEAKVSKLVELGFGRDAVLQALRLFNGNEEQAAGFLFG 247
             SGVA  G T        QG DFEAKV+KLVELGFGR+AV+QALRLF+GNEEQAAGFLFG
Sbjct: 358  SSGVARGGATQFSLILAGQGPDFEAKVAKLVELGFGREAVIQALRLFDGNEEQAAGFLFG 417

Query: 246  G 244
            G
Sbjct: 418  G 418


>ref|XP_002276099.1| PREDICTED: DNA damage-inducible protein 1 [Vitis vinifera]
            gi|296090003|emb|CBI39822.3| unnamed protein product
            [Vitis vinifera]
          Length = 410

 Score =  614 bits (1583), Expect = e-173
 Identities = 318/417 (76%), Positives = 358/417 (85%), Gaps = 5/417 (1%)
 Frame = -3

Query: 1479 MKLTVMTADEQFITLDVDPEESVENLKALLEVETRVPLEQQQLVFNGNEMTNEKRLSGIG 1300
            MK+TVMTADEQ I+LDVD +ESVEN+KALLEVETRVPL+QQQL+FNG EM N ++LS +G
Sbjct: 1    MKITVMTADEQIISLDVDRDESVENVKALLEVETRVPLQQQQLLFNGQEMRNNEKLSALG 60

Query: 1299 IKDGDLVMMMISNASSNRAPASD---LRFDPDGSAVNPGAFQQHVRNNSNMISQLLQNDP 1129
            +KD DLVMM+     SN AP+S    L  +PDGSAVNP A QQH R  SN ++QL Q DP
Sbjct: 61   VKDEDLVMMV-----SNAAPSSSTNALSLNPDGSAVNPEALQQHFRRESNTMAQLFQTDP 115

Query: 1128 EFAQAILGNDLNRLQQILRERHQQRSELQRKQEEEMALLDADPFDVEAQRKIEAAIRQKG 949
            EFAQA+LGNDLN+LQ+ILR+RH+ RSE+QR+++EE+ALL ADPFDVEAQ+KIEAAI+QKG
Sbjct: 116  EFAQALLGNDLNKLQEILRQRHRHRSEIQRQRDEELALLYADPFDVEAQKKIEAAIQQKG 175

Query: 948  INENWEAALEYNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLL 769
            I+ENW AALEYNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLL
Sbjct: 176  IDENWAAALEYNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLL 235

Query: 768  DERFKGIAHGVGQTEILGRIHVAPIKIGNVFYHCSFQVLDSPNMEFLFGLDMLRKHQCLI 589
            D R++GIAHGVGQ+EILGRIHVAPIKIGN+FY CSF VLDSPNMEFLFGLDMLRKHQC+I
Sbjct: 236  DRRYRGIAHGVGQSEILGRIHVAPIKIGNIFYPCSFMVLDSPNMEFLFGLDMLRKHQCII 295

Query: 588  DLKDNVLRVGGGEVSVPFLQEKDLPSHFRDEEKYSKNDSGSAS-ETSGTKEKNISSIVST 412
            DLKDNVLRVGGGEVSVPFLQEKD+PSHF DEE+YSK  S S     SG K+KN +   S 
Sbjct: 296  DLKDNVLRVGGGEVSVPFLQEKDIPSHFLDEERYSKQASSSGGPAASGAKDKNDNP--SA 353

Query: 411  GGQPSGVAGSG-LTQGHDFEAKVSKLVELGFGRDAVLQALRLFNGNEEQAAGFLFGG 244
            G Q  G  G G L QG +FEAKV+KLVELGF R AV+QALRLFNGNEEQAAGFLFGG
Sbjct: 354  GVQSVGSGGGGALAQGTEFEAKVTKLVELGFERGAVIQALRLFNGNEEQAAGFLFGG 410


>gb|AEW69812.1| Hop-interacting protein THI111 [Solanum lycopersicum]
          Length = 407

 Score =  613 bits (1581), Expect = e-173
 Identities = 312/412 (75%), Positives = 350/412 (84%)
 Frame = -3

Query: 1479 MKLTVMTADEQFITLDVDPEESVENLKALLEVETRVPLEQQQLVFNGNEMTNEKRLSGIG 1300
            MK+TVMT DEQ +TLDVD +ESVENLKALLEVET+VPL+QQQL++NG EM N  +LS +G
Sbjct: 1    MKITVMTTDEQIVTLDVDRDESVENLKALLEVETQVPLQQQQLLYNGKEMRNSDKLSAVG 60

Query: 1299 IKDGDLVMMMISNASSNRAPASDLRFDPDGSAVNPGAFQQHVRNNSNMISQLLQNDPEFA 1120
            + DGDLVMM+ S AS + APA+DL F  DGSAVNP AFQQH+RN+SN+++QL QNDPE A
Sbjct: 61   VGDGDLVMMVSSAASQSSAPANDLSFKQDGSAVNPSAFQQHLRNDSNLMAQLFQNDPELA 120

Query: 1119 QAILGNDLNRLQQILRERHQQRSELQRKQEEEMALLDADPFDVEAQRKIEAAIRQKGINE 940
            QA+LGNDLNRLQ++LR RHQ +SEL+R+QEEEMALL ADPFDVEAQRKIE  IRQKGI E
Sbjct: 121  QAVLGNDLNRLQELLRLRHQHKSELRRRQEEEMALLYADPFDVEAQRKIEEQIRQKGIEE 180

Query: 939  NWEAALEYNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDER 760
            NW AALE+NPEAF  VVMLYVDMEVNG PLKAFVDSGAQSTIISKSCAERCGL RLLD R
Sbjct: 181  NWAAALEHNPEAFGTVVMLYVDMEVNGHPLKAFVDSGAQSTIISKSCAERCGLWRLLDTR 240

Query: 759  FKGIAHGVGQTEILGRIHVAPIKIGNVFYHCSFQVLDSPNMEFLFGLDMLRKHQCLIDLK 580
            +KGIA GVGQTEILGRIHVAPIKIG +FY CSF VLDSPNMEFLFGLDMLRKHQC+IDLK
Sbjct: 241  YKGIARGVGQTEILGRIHVAPIKIGKIFYPCSFVVLDSPNMEFLFGLDMLRKHQCMIDLK 300

Query: 579  DNVLRVGGGEVSVPFLQEKDLPSHFRDEEKYSKNDSGSASETSGTKEKNISSIVSTGGQP 400
            DNVLRVGGGEV+VPFL EKD+PSHF DE K   + SG A  TSG   K       T G P
Sbjct: 301  DNVLRVGGGEVAVPFLHEKDIPSHFLDERKAEASSSG-AQATSGATGKT----DPTKGSP 355

Query: 399  SGVAGSGLTQGHDFEAKVSKLVELGFGRDAVLQALRLFNGNEEQAAGFLFGG 244
            SG AG  LTQG +FEAKV+KLVELGFGR+AV+QAL+ F+GNEEQAAG+LFGG
Sbjct: 356  SGSAGGNLTQGPEFEAKVAKLVELGFGREAVVQALKFFDGNEEQAAGYLFGG 407


Top