BLASTX nr result

ID: Coptis25_contig00006343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006343
         (985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238493.1| uncharacterized protein LOC100305647 precurs...    62   3e-07
ref|NP_001238205.1| uncharacterized protein LOC100499677 precurs...    60   1e-06
gb|AAR07596.1| fiber protein Fb34 [Gossypium barbadense]               59   1e-06
gb|AEO32392.1| hypothetical protein [Amblyomma maculatum]              59   2e-06
gb|AFK33716.1| unknown [Lotus japonicus]                               59   2e-06

>ref|NP_001238493.1| uncharacterized protein LOC100305647 precursor [Glycine max]
           gi|255626185|gb|ACU13437.1| unknown [Glycine max]
          Length = 185

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 25/39 (64%), Positives = 36/39 (92%)
 Frame = -3

Query: 275 AQIVTDSEKNYNHCMYDSNISTGYGVGSFFFLLANRLLI 159
           A +VTD+EKNYN+C+Y+S+I+TGYGVG+F FLL +++LI
Sbjct: 31  ASVVTDNEKNYNYCVYNSDIATGYGVGAFLFLLVSQVLI 69


>ref|NP_001238205.1| uncharacterized protein LOC100499677 precursor [Glycine max]
           gi|255625711|gb|ACU13200.1| unknown [Glycine max]
          Length = 185

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 25/39 (64%), Positives = 35/39 (89%)
 Frame = -3

Query: 275 AQIVTDSEKNYNHCMYDSNISTGYGVGSFFFLLANRLLI 159
           A IV D+EKNYN+C+Y+S+I+TGYGVG+F FLL +++LI
Sbjct: 31  ASIVPDNEKNYNYCVYNSDIATGYGVGAFLFLLVSQVLI 69


>gb|AAR07596.1| fiber protein Fb34 [Gossypium barbadense]
          Length = 185

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -3

Query: 275 AQIVTDSEKNYNHCMYDSNISTGYGVGSFFFLLANRLLICSTN 147
           A+IV DSE NYN+C+YDS ISTGYGVG+F FL+ ++ LI + +
Sbjct: 31  AKIVQDSEVNYNYCVYDSYISTGYGVGAFLFLMVSQALIMAAS 73


>gb|AEO32392.1| hypothetical protein [Amblyomma maculatum]
          Length = 177

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 24/39 (61%), Positives = 34/39 (87%)
 Frame = -3

Query: 275 AQIVTDSEKNYNHCMYDSNISTGYGVGSFFFLLANRLLI 159
           A +V D+EKNY +C+YDS+I+TGYGVG+F FLL +++LI
Sbjct: 31  ANVVPDTEKNYTYCVYDSDIATGYGVGAFLFLLVSQVLI 69


>gb|AFK33716.1| unknown [Lotus japonicus]
          Length = 186

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 24/39 (61%), Positives = 35/39 (89%)
 Frame = -3

Query: 275 AQIVTDSEKNYNHCMYDSNISTGYGVGSFFFLLANRLLI 159
           A+IV DSE NYN+C+Y+S+I+TGYGVG+F FL+ +++LI
Sbjct: 31  AKIVLDSEANYNYCVYNSDIATGYGVGAFLFLMVSQILI 69


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