BLASTX nr result

ID: Coptis25_contig00006340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006340
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331857.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
ref|XP_002272873.1| PREDICTED: 60S ribosomal protein L32-1 [Viti...   196   2e-48
gb|AAK43709.1|AF358665_1 ribosomal protein L32 [Mercurialis annu...   196   3e-48
gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]                194   7e-48
gb|ADR71279.1| 60S ribosomal protein L32A [Hevea brasiliensis] g...   194   7e-48

>ref|XP_002331857.1| predicted protein [Populus trichocarpa]
           gi|224132224|ref|XP_002321286.1| predicted protein
           [Populus trichocarpa] gi|118483614|gb|ABK93702.1|
           unknown [Populus trichocarpa]
           gi|118484494|gb|ABK94122.1| unknown [Populus
           trichocarpa] gi|222862059|gb|EEE99601.1| predicted
           protein [Populus trichocarpa]
           gi|222875375|gb|EEF12506.1| predicted protein [Populus
           trichocarpa]
          Length = 133

 Score =  197 bits (500), Expect = 1e-48
 Identities = 94/99 (94%), Positives = 97/99 (97%)
 Frame = +1

Query: 4   NWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFLVHNAKELEILMMHNR 183
           NWRRPKGIDSRVRRKFKG TLMPNIGYGSDKKTRHYLPNGFKKF+VHN KELE+LMMHNR
Sbjct: 32  NWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKELEVLMMHNR 91

Query: 184 TYCAEIAHNLSTRKRKEIVERAAQLDVVVTNKLARLRSQ 300
           TYCAEIAHN+STRKRKEIVERAAQLDVVVTNKLARLRSQ
Sbjct: 92  TYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKLARLRSQ 130


>ref|XP_002272873.1| PREDICTED: 60S ribosomal protein L32-1 [Vitis vinifera]
           gi|147815192|emb|CAN74433.1| hypothetical protein
           VITISV_040276 [Vitis vinifera]
           gi|297740628|emb|CBI30810.3| unnamed protein product
           [Vitis vinifera]
          Length = 133

 Score =  196 bits (499), Expect = 2e-48
 Identities = 94/99 (94%), Positives = 98/99 (98%)
 Frame = +1

Query: 4   NWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFLVHNAKELEILMMHNR 183
           NWRRPKGIDSRVRRKFKG TLMPNIGYGSDKKTRHYLPNGFKKF+VHNA+ELE+LMMHNR
Sbjct: 32  NWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNAQELELLMMHNR 91

Query: 184 TYCAEIAHNLSTRKRKEIVERAAQLDVVVTNKLARLRSQ 300
           TYCAEIAHN+STRKRKEIVERAAQLDVVVTNKLARLRSQ
Sbjct: 92  TYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKLARLRSQ 130


>gb|AAK43709.1|AF358665_1 ribosomal protein L32 [Mercurialis annua]
           gi|13899053|gb|AAK48948.1|AF370436_1 ribosomal protein
           L32 [Mercurialis annua]
           gi|13899055|gb|AAK48949.1|AF370437_1 ribosomal protein
           L32 [Mercurialis annua]
           gi|13899057|gb|AAK48950.1|AF370438_1 ribosomal protein
           L32 [Mercurialis annua]
          Length = 133

 Score =  196 bits (497), Expect = 3e-48
 Identities = 93/100 (93%), Positives = 99/100 (99%)
 Frame = +1

Query: 1   ENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFLVHNAKELEILMMHN 180
           ENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKF+VHN +ELE+LMMHN
Sbjct: 31  ENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVQELELLMMHN 90

Query: 181 RTYCAEIAHNLSTRKRKEIVERAAQLDVVVTNKLARLRSQ 300
           RTYCAEIAH++STRKRK+IVERAAQLDVVVTNKLARLRSQ
Sbjct: 91  RTYCAEIAHDVSTRKRKDIVERAAQLDVVVTNKLARLRSQ 130


>gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]
          Length = 133

 Score =  194 bits (494), Expect = 7e-48
 Identities = 92/100 (92%), Positives = 99/100 (99%)
 Frame = +1

Query: 1   ENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFLVHNAKELEILMMHN 180
           ++WRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKF+VHN ++LE+LMMHN
Sbjct: 31  QSWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVQDLELLMMHN 90

Query: 181 RTYCAEIAHNLSTRKRKEIVERAAQLDVVVTNKLARLRSQ 300
           RTYCAEIAHN+STRKRKEIVERAAQLDVVVTNKLARLRSQ
Sbjct: 91  RTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKLARLRSQ 130


>gb|ADR71279.1| 60S ribosomal protein L32A [Hevea brasiliensis]
           gi|313586539|gb|ADR71280.1| 60S ribosomal protein L32B
           [Hevea brasiliensis]
          Length = 133

 Score =  194 bits (494), Expect = 7e-48
 Identities = 93/99 (93%), Positives = 97/99 (97%)
 Frame = +1

Query: 4   NWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFLVHNAKELEILMMHNR 183
           NWRRPKGIDSRVRRKFKG TLMPNIGYGSDKKTRHYLPNGFKKF+VHN KELE+LMMHNR
Sbjct: 32  NWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKELELLMMHNR 91

Query: 184 TYCAEIAHNLSTRKRKEIVERAAQLDVVVTNKLARLRSQ 300
           TYCAEIAH++STRKRKEIVERAAQLDVVVTNKLARLRSQ
Sbjct: 92  TYCAEIAHDVSTRKRKEIVERAAQLDVVVTNKLARLRSQ 130


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