BLASTX nr result

ID: Coptis25_contig00006320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006320
         (2818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20940.3| unnamed protein product [Vitis vinifera]              131   9e-28
ref|XP_002281922.1| PREDICTED: uncharacterized protein LOC100264...   131   9e-28
ref|XP_003549238.1| PREDICTED: uncharacterized protein LOC100789...   114   1e-22
ref|XP_002516604.1| hypothetical protein RCOM_0804080 [Ricinus c...   111   1e-21
ref|XP_002309585.1| hypothetical protein POPTRDRAFT_561815 [Popu...   109   4e-21

>emb|CBI20940.3| unnamed protein product [Vitis vinifera]
          Length = 1634

 Score =  131 bits (330), Expect = 9e-28
 Identities = 69/108 (63%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
 Frame = +1

Query: 2485 NSGQVTLKFSIP-LQFVNDTFRAENSWLFRTLLLLQYGVVMVMWPKVQLEMLFVDNVVGL 2661
            NS     +FS+P L  +N  F AEN WLF T+LL QYGVVM  WPKV+LEMLFVDN+VGL
Sbjct: 646  NSRHFRFEFSLPALPVLNCAFGAENFWLFHTVLLHQYGVVMPKWPKVRLEMLFVDNLVGL 705

Query: 2662 RFLLFEGCLMQAVGFVCLVLLAFHQQPDEHGEVLDWQVPVTSIRLEIS 2805
            RFLLFEGCL QAV FVCLVL  F+ QP+E G  +D Q PVTSI+ ++S
Sbjct: 706  RFLLFEGCLKQAVAFVCLVLTIFN-QPNEQGRYVDLQFPVTSIKFKLS 752


>ref|XP_002281922.1| PREDICTED: uncharacterized protein LOC100264575 [Vitis vinifera]
          Length = 1679

 Score =  131 bits (330), Expect = 9e-28
 Identities = 69/108 (63%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
 Frame = +1

Query: 2485 NSGQVTLKFSIP-LQFVNDTFRAENSWLFRTLLLLQYGVVMVMWPKVQLEMLFVDNVVGL 2661
            NS     +FS+P L  +N  F AEN WLF T+LL QYGVVM  WPKV+LEMLFVDN+VGL
Sbjct: 646  NSRHFRFEFSLPALPVLNCAFGAENFWLFHTVLLHQYGVVMPKWPKVRLEMLFVDNLVGL 705

Query: 2662 RFLLFEGCLMQAVGFVCLVLLAFHQQPDEHGEVLDWQVPVTSIRLEIS 2805
            RFLLFEGCL QAV FVCLVL  F+ QP+E G  +D Q PVTSI+ ++S
Sbjct: 706  RFLLFEGCLKQAVAFVCLVLTIFN-QPNEQGRYVDLQFPVTSIKFKLS 752


>ref|XP_003549238.1| PREDICTED: uncharacterized protein LOC100789801 [Glycine max]
          Length = 1586

 Score =  114 bits (286), Expect = 1e-22
 Identities = 64/120 (53%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
 Frame = +1

Query: 2449 PKFVSDKKKGYFNSGQVTLKFSIPLQFV-NDTFRAENSWLFRTLLLLQYGVVMVMWPKVQ 2625
            PK   D K   F  G      + P++ V ND F++EN WL  T+LLL++G VM  WP+V 
Sbjct: 599  PKVFWDMKSASFKFG-----LNFPMRLVLNDFFQSENLWLLYTVLLLRFGTVMAKWPRVY 653

Query: 2626 LEMLFVDNVVGLRFLLFEGCLMQAVGFVCLVLLAFHQQPDEHGEVLDWQVPVTSIRLEIS 2805
            LEMLFVDNVVGLRFLLFEGCL  A  FV  VL  FH QPD  G+ +D Q P TSI  + S
Sbjct: 654  LEMLFVDNVVGLRFLLFEGCLNTAAAFVFFVLRVFH-QPDCQGKYVDLQFPCTSIGFKFS 712


>ref|XP_002516604.1| hypothetical protein RCOM_0804080 [Ricinus communis]
            gi|223544424|gb|EEF45945.1| hypothetical protein
            RCOM_0804080 [Ricinus communis]
          Length = 1705

 Score =  111 bits (277), Expect = 1e-21
 Identities = 54/91 (59%), Positives = 68/91 (74%)
 Frame = +1

Query: 2533 NDTFRAENSWLFRTLLLLQYGVVMVMWPKVQLEMLFVDNVVGLRFLLFEGCLMQAVGFVC 2712
            N +F + ++W    LLLLQ+G +M  WP+V LEMLFVDN+VGLRFLLFEGCL QA+ FV 
Sbjct: 680  NFSFISGHTWFCNALLLLQHGRLMTTWPRVHLEMLFVDNIVGLRFLLFEGCLKQAIAFVL 739

Query: 2713 LVLLAFHQQPDEHGEVLDWQVPVTSIRLEIS 2805
             VL  FH QP EHG+ +D Q+PVTSI+ + S
Sbjct: 740  QVLTVFH-QPTEHGKFVDLQLPVTSIKFKFS 769


>ref|XP_002309585.1| hypothetical protein POPTRDRAFT_561815 [Populus trichocarpa]
            gi|222855561|gb|EEE93108.1| hypothetical protein
            POPTRDRAFT_561815 [Populus trichocarpa]
          Length = 1686

 Score =  109 bits (273), Expect = 4e-21
 Identities = 53/101 (52%), Positives = 71/101 (70%)
 Frame = +1

Query: 2503 LKFSIPLQFVNDTFRAENSWLFRTLLLLQYGVVMVMWPKVQLEMLFVDNVVGLRFLLFEG 2682
            L F +P    + +F +E  WL   + LLQYG++M  WP++ LEMLFVDN VGLRFLLFEG
Sbjct: 716  LSFLLPSVPRHYSFGSEIVWLIHAMALLQYGMLMTTWPRIHLEMLFVDNGVGLRFLLFEG 775

Query: 2683 CLMQAVGFVCLVLLAFHQQPDEHGEVLDWQVPVTSIRLEIS 2805
            CL +AV FV LVL  F+Q  ++ G+  D+Q+P+TSIR + S
Sbjct: 776  CLKEAVAFVFLVLTIFYQPNEQQGKCADFQLPITSIRFKFS 816


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