BLASTX nr result

ID: Coptis25_contig00006318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006318
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187239.1| Hydrophobic protein RCI2A [Arabidopsis thaliana...   100   9e-19
gb|AFK81273.1| rare cold-inducible protein 2A [Camelina sativa] ...   100   1e-18
ref|XP_002316342.1| stress-induced hydrophobic peptide [Populus ...    97   6e-18
gb|AAF26091.1|AC012393_17 low temperature and salt responsive pr...    97   8e-18
ref|XP_002884539.1| low temperature and salt responsive protein ...    97   8e-18

>ref|NP_187239.1| Hydrophobic protein RCI2A [Arabidopsis thaliana]
           gi|15214251|sp|Q9ZNQ7.1|RCI2A_ARATH RecName:
           Full=Hydrophobic protein RCI2A; AltName: Full=Low
           temperature and salt-responsive protein LTI6A
           gi|6714401|gb|AAF26090.1|AC012393_16 low temperature and
           salt responsive protein LTI6A [Arabidopsis thaliana]
           gi|13957674|gb|AAK50619.1|AF264749_2 hydrophobic protein
           RCI2A [Arabidopsis thaliana] gi|4039153|gb|AAC97512.1|
           low temperature and salt responsive protein LTI6A
           [Arabidopsis thaliana] gi|4325217|gb|AAD17302.1|
           hydrophobic protein [Arabidopsis thaliana]
           gi|14335130|gb|AAK59845.1| AT3g05880/F10A16_18
           [Arabidopsis thaliana] gi|14532470|gb|AAK63963.1|
           AT3g05880/F10A16_18 [Arabidopsis thaliana]
           gi|18655345|gb|AAL76128.1| AT3g05880/F10A16_18
           [Arabidopsis thaliana] gi|332640790|gb|AEE74311.1|
           Hydrophobic protein RCI2A [Arabidopsis thaliana]
          Length = 54

 Score =  100 bits (248), Expect = 9e-19
 Identities = 43/54 (79%), Positives = 53/54 (98%)
 Frame = -1

Query: 483 MSSATFLEIVLAIILPPLGVFLRFKCGVEFWICLVLTILGYLPGIIYAVYVITK 322
           MS+ATF++I++AI+LPPLGVFLRF CGVEFWICLVLT+LGY+PGIIYA+YV+TK
Sbjct: 1   MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54


>gb|AFK81273.1| rare cold-inducible protein 2A [Camelina sativa]
           gi|388893090|gb|AFK81275.1| rare cold-inducible protein
           2A [Camelina sativa]
          Length = 54

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 42/54 (77%), Positives = 53/54 (98%)
 Frame = -1

Query: 483 MSSATFLEIVLAIILPPLGVFLRFKCGVEFWICLVLTILGYLPGIIYAVYVITK 322
           MS+ATF++I++A++LPPLGVFLRF CGVEFWICLVLT+LGY+PGIIYA+YV+TK
Sbjct: 1   MSTATFVDIIIAVLLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54


>ref|XP_002316342.1| stress-induced hydrophobic peptide [Populus trichocarpa]
           gi|222865382|gb|EEF02513.1| stress-induced hydrophobic
           peptide [Populus trichocarpa]
          Length = 54

 Score = 97.4 bits (241), Expect = 6e-18
 Identities = 43/52 (82%), Positives = 50/52 (96%)
 Frame = -1

Query: 483 MSSATFLEIVLAIILPPLGVFLRFKCGVEFWICLVLTILGYLPGIIYAVYVI 328
           M SATFLE++LAIILPP+GVFLR+ CGVEFWICL+LTILGYLPGIIYA+YV+
Sbjct: 1   MGSATFLEVILAIILPPVGVFLRYGCGVEFWICLLLTILGYLPGIIYAIYVL 52


>gb|AAF26091.1|AC012393_17 low temperature and salt responsive protein LTI6B [Arabidopsis
           thaliana]
          Length = 67

 Score = 97.1 bits (240), Expect = 8e-18
 Identities = 43/56 (76%), Positives = 52/56 (92%)
 Frame = -1

Query: 483 MSSATFLEIVLAIILPPLGVFLRFKCGVEFWICLVLTILGYLPGIIYAVYVITK*N 316
           MS+ATF+EI+LAIILPPLGVFL+F C VEFWICL+LT+ GYLPGI+YA+Y+ITK N
Sbjct: 1   MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITKKN 56


>ref|XP_002884539.1| low temperature and salt responsive protein LTI6B [Arabidopsis
           lyrata subsp. lyrata] gi|297330379|gb|EFH60798.1| low
           temperature and salt responsive protein LTI6B
           [Arabidopsis lyrata subsp. lyrata]
          Length = 67

 Score = 97.1 bits (240), Expect = 8e-18
 Identities = 43/56 (76%), Positives = 52/56 (92%)
 Frame = -1

Query: 483 MSSATFLEIVLAIILPPLGVFLRFKCGVEFWICLVLTILGYLPGIIYAVYVITK*N 316
           MS+ATF+EI+LAIILPPLGVFL+F C VEFWICL+LT+ GYLPGI+YA+Y+ITK N
Sbjct: 1   MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITKRN 56


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