BLASTX nr result
ID: Coptis25_contig00006318
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006318 (1194 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_187239.1| Hydrophobic protein RCI2A [Arabidopsis thaliana... 100 9e-19 gb|AFK81273.1| rare cold-inducible protein 2A [Camelina sativa] ... 100 1e-18 ref|XP_002316342.1| stress-induced hydrophobic peptide [Populus ... 97 6e-18 gb|AAF26091.1|AC012393_17 low temperature and salt responsive pr... 97 8e-18 ref|XP_002884539.1| low temperature and salt responsive protein ... 97 8e-18 >ref|NP_187239.1| Hydrophobic protein RCI2A [Arabidopsis thaliana] gi|15214251|sp|Q9ZNQ7.1|RCI2A_ARATH RecName: Full=Hydrophobic protein RCI2A; AltName: Full=Low temperature and salt-responsive protein LTI6A gi|6714401|gb|AAF26090.1|AC012393_16 low temperature and salt responsive protein LTI6A [Arabidopsis thaliana] gi|13957674|gb|AAK50619.1|AF264749_2 hydrophobic protein RCI2A [Arabidopsis thaliana] gi|4039153|gb|AAC97512.1| low temperature and salt responsive protein LTI6A [Arabidopsis thaliana] gi|4325217|gb|AAD17302.1| hydrophobic protein [Arabidopsis thaliana] gi|14335130|gb|AAK59845.1| AT3g05880/F10A16_18 [Arabidopsis thaliana] gi|14532470|gb|AAK63963.1| AT3g05880/F10A16_18 [Arabidopsis thaliana] gi|18655345|gb|AAL76128.1| AT3g05880/F10A16_18 [Arabidopsis thaliana] gi|332640790|gb|AEE74311.1| Hydrophobic protein RCI2A [Arabidopsis thaliana] Length = 54 Score = 100 bits (248), Expect = 9e-19 Identities = 43/54 (79%), Positives = 53/54 (98%) Frame = -1 Query: 483 MSSATFLEIVLAIILPPLGVFLRFKCGVEFWICLVLTILGYLPGIIYAVYVITK 322 MS+ATF++I++AI+LPPLGVFLRF CGVEFWICLVLT+LGY+PGIIYA+YV+TK Sbjct: 1 MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54 >gb|AFK81273.1| rare cold-inducible protein 2A [Camelina sativa] gi|388893090|gb|AFK81275.1| rare cold-inducible protein 2A [Camelina sativa] Length = 54 Score = 99.8 bits (247), Expect = 1e-18 Identities = 42/54 (77%), Positives = 53/54 (98%) Frame = -1 Query: 483 MSSATFLEIVLAIILPPLGVFLRFKCGVEFWICLVLTILGYLPGIIYAVYVITK 322 MS+ATF++I++A++LPPLGVFLRF CGVEFWICLVLT+LGY+PGIIYA+YV+TK Sbjct: 1 MSTATFVDIIIAVLLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54 >ref|XP_002316342.1| stress-induced hydrophobic peptide [Populus trichocarpa] gi|222865382|gb|EEF02513.1| stress-induced hydrophobic peptide [Populus trichocarpa] Length = 54 Score = 97.4 bits (241), Expect = 6e-18 Identities = 43/52 (82%), Positives = 50/52 (96%) Frame = -1 Query: 483 MSSATFLEIVLAIILPPLGVFLRFKCGVEFWICLVLTILGYLPGIIYAVYVI 328 M SATFLE++LAIILPP+GVFLR+ CGVEFWICL+LTILGYLPGIIYA+YV+ Sbjct: 1 MGSATFLEVILAIILPPVGVFLRYGCGVEFWICLLLTILGYLPGIIYAIYVL 52 >gb|AAF26091.1|AC012393_17 low temperature and salt responsive protein LTI6B [Arabidopsis thaliana] Length = 67 Score = 97.1 bits (240), Expect = 8e-18 Identities = 43/56 (76%), Positives = 52/56 (92%) Frame = -1 Query: 483 MSSATFLEIVLAIILPPLGVFLRFKCGVEFWICLVLTILGYLPGIIYAVYVITK*N 316 MS+ATF+EI+LAIILPPLGVFL+F C VEFWICL+LT+ GYLPGI+YA+Y+ITK N Sbjct: 1 MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITKKN 56 >ref|XP_002884539.1| low temperature and salt responsive protein LTI6B [Arabidopsis lyrata subsp. lyrata] gi|297330379|gb|EFH60798.1| low temperature and salt responsive protein LTI6B [Arabidopsis lyrata subsp. lyrata] Length = 67 Score = 97.1 bits (240), Expect = 8e-18 Identities = 43/56 (76%), Positives = 52/56 (92%) Frame = -1 Query: 483 MSSATFLEIVLAIILPPLGVFLRFKCGVEFWICLVLTILGYLPGIIYAVYVITK*N 316 MS+ATF+EI+LAIILPPLGVFL+F C VEFWICL+LT+ GYLPGI+YA+Y+ITK N Sbjct: 1 MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITKRN 56