BLASTX nr result
ID: Coptis25_contig00006306
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006306 (1301 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit... 276 1e-71 ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|2... 250 5e-64 ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|2... 249 1e-63 ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like... 246 9e-63 emb|CBI40211.3| unnamed protein product [Vitis vinifera] 246 9e-63 >ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera] Length = 228 Score = 276 bits (705), Expect = 1e-71 Identities = 141/232 (60%), Positives = 165/232 (71%) Frame = +3 Query: 243 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 422 MI G+NLVMTVIGFAVSTMFIVFVCTRL+CARIQ+NASRRSFP AS S+L +LERG+HG Sbjct: 1 MISGGVNLVMTVIGFAVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGLHG 60 Query: 423 LEPAVYAXXXXXXXXXXXXXXXXAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 602 LEPAV A AQCTVCL +YQ +D+LRILPYCGH FHV CIDIWLQ Sbjct: 61 LEPAVVANFPTKKFADEFFSPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQ 120 Query: 603 QNSTCPICRISLRGSPERKRIMQPMLSSAIRSSHSMAPRYSHSYRFSYASQGYSSRSIDN 782 Q+STCP+CRISL PERK +MQPM SSA+RS M R +HSY +G+SSRS DN Sbjct: 121 QHSTCPVCRISLWEFPERKCLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGFSSRSHDN 180 Query: 783 RRMEPIQEDQFALDLNSAEAGGNFTSFPEVNRALKDIGCGESDNKLVDSPSN 938 RM+PIQEDQF + AEA + + N+ KD S+NK ++SPSN Sbjct: 181 HRMDPIQEDQFGPGGDGAEAQESTLPLTDANQPAKD-----SENKHIESPSN 227 >ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|222864493|gb|EEF01624.1| predicted protein [Populus trichocarpa] Length = 227 Score = 250 bits (639), Expect = 5e-64 Identities = 134/232 (57%), Positives = 158/232 (68%) Frame = +3 Query: 243 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 422 M+ +GINLVMTVIGF+VSTMFIVFVCTRLICARIQ+NASRRSF AS S+L +LERG+HG Sbjct: 1 MMASGINLVMTVIGFSVSTMFIVFVCTRLICARIQLNASRRSFRIASRSDLSMLERGLHG 60 Query: 423 LEPAVYAXXXXXXXXXXXXXXXXAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 602 LEP V A AQCTVCLA+Y KD+LRILPYCGHSFHV CID+WLQ Sbjct: 61 LEPVVIASFPTKKYNDKLFSASEDAQCTVCLAEYHGKDILRILPYCGHSFHVTCIDMWLQ 120 Query: 603 QNSTCPICRISLRGSPERKRIMQPMLSSAIRSSHSMAPRYSHSYRFSYASQGYSSRSIDN 782 Q+STCP+CRISLR PE+K MQP+ SSAIRS + SHSY + G S RS D+ Sbjct: 121 QHSTCPMCRISLREFPEKKCAMQPLFSSAIRSQYGTETFDSHSYNYLLTGHGISQRSDDS 180 Query: 783 RRMEPIQEDQFALDLNSAEAGGNFTSFPEVNRALKDIGCGESDNKLVDSPSN 938 M+ IQ++ A D + A G N E N+ KD G +K V+SPSN Sbjct: 181 HGMDTIQDNLCASDGDEA-CGENSPPLTESNQIAKDTG-----DKHVESPSN 226 >ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|222850859|gb|EEE88406.1| predicted protein [Populus trichocarpa] Length = 226 Score = 249 bits (636), Expect = 1e-63 Identities = 133/232 (57%), Positives = 154/232 (66%) Frame = +3 Query: 243 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 422 MI +GINLVMTVIGF VSTMFIVFVCTRL+CARIQMNASRR+FP AS SNL LLERG G Sbjct: 1 MIASGINLVMTVIGFGVSTMFIVFVCTRLLCARIQMNASRRAFPIASRSNLSLLERG--G 58 Query: 423 LEPAVYAXXXXXXXXXXXXXXXXAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 602 LE A AQCT+CLA+Y D+LRILPYCGHSFHV CIDIWLQ Sbjct: 59 LEHVFLANFPTKKYNDKIFSASEDAQCTICLAEYHGDDILRILPYCGHSFHVTCIDIWLQ 118 Query: 603 QNSTCPICRISLRGSPERKRIMQPMLSSAIRSSHSMAPRYSHSYRFSYASQGYSSRSIDN 782 Q+STCP+CRISLR PE+KR+MQP+ SSAIRS + SHSY + G S RS +N Sbjct: 119 QHSTCPVCRISLREFPEKKRVMQPLFSSAIRSRNGTETFDSHSYNYMLTEHGISPRSYNN 178 Query: 783 RRMEPIQEDQFALDLNSAEAGGNFTSFPEVNRALKDIGCGESDNKLVDSPSN 938 +PIQ++ A + E G N E N+ KDI +K V+SPSN Sbjct: 179 HGTDPIQDNHCASGGDEEEGGENSPPLTESNQIAKDIA-----DKHVESPSN 225 >ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like [Glycine max] Length = 229 Score = 246 bits (628), Expect = 9e-63 Identities = 129/232 (55%), Positives = 156/232 (67%) Frame = +3 Query: 243 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 422 MI +GINLVMTVIGFAVSTMFIVFVCTRLICARI +NA+RRSFP AS SNL ++ERG HG Sbjct: 1 MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHLNAARRSFPIASRSNLSMMERGCHG 60 Query: 423 LEPAVYAXXXXXXXXXXXXXXXXAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 602 LE A +QCTVCL++YQ +D+LRILPYCGHSFHV CID+WLQ Sbjct: 61 LERVTVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVTCIDLWLQ 120 Query: 603 QNSTCPICRISLRGSPERKRIMQPMLSSAIRSSHSMAPRYSHSYRFSYASQGYSSRSIDN 782 QNSTCP+CRISLR P+RKR+MQP+ SSA++ + + + Y A G SSR+ DN Sbjct: 121 QNSTCPVCRISLREFPDRKRLMQPLFSSALQPHYDIESFDNRHYHCMIADNGLSSRTPDN 180 Query: 783 RRMEPIQEDQFALDLNSAEAGGNFTSFPEVNRALKDIGCGESDNKLVDSPSN 938 + PI+ED F + + A A N T E +KD G K V+SPSN Sbjct: 181 HAVNPIEEDHFPSEGDGAVAMDNITCLSE-GDFIKDEG-----KKHVESPSN 226 >emb|CBI40211.3| unnamed protein product [Vitis vinifera] Length = 209 Score = 246 bits (628), Expect = 9e-63 Identities = 125/213 (58%), Positives = 148/213 (69%) Frame = +3 Query: 300 MFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHGLEPAVYAXXXXXXXXXXXX 479 MFIVFVCTRL+CARIQ+NASRRSFP AS S+L +LERG+HGLEPAV A Sbjct: 1 MFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGLHGLEPAVVANFPTKKFADEFF 60 Query: 480 XXXXAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQQNSTCPICRISLRGSPERK 659 AQCTVCL +YQ +D+LRILPYCGH FHV CIDIWLQQ+STCP+CRISL PERK Sbjct: 61 SPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQQHSTCPVCRISLWEFPERK 120 Query: 660 RIMQPMLSSAIRSSHSMAPRYSHSYRFSYASQGYSSRSIDNRRMEPIQEDQFALDLNSAE 839 +MQPM SSA+RS M R +HSY +G+SSRS DN RM+PIQEDQF + AE Sbjct: 121 CLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGFSSRSHDNHRMDPIQEDQFGPGGDGAE 180 Query: 840 AGGNFTSFPEVNRALKDIGCGESDNKLVDSPSN 938 A + + N+ KD S+NK ++SPSN Sbjct: 181 AQESTLPLTDANQPAKD-----SENKHIESPSN 208