BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006306
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit...   276   1e-71
ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|2...   250   5e-64
ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|2...   249   1e-63
ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like...   246   9e-63
emb|CBI40211.3| unnamed protein product [Vitis vinifera]              246   9e-63

>ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera]
          Length = 228

 Score =  276 bits (705), Expect = 1e-71
 Identities = 141/232 (60%), Positives = 165/232 (71%)
 Frame = +3

Query: 243 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 422
           MI  G+NLVMTVIGFAVSTMFIVFVCTRL+CARIQ+NASRRSFP AS S+L +LERG+HG
Sbjct: 1   MISGGVNLVMTVIGFAVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGLHG 60

Query: 423 LEPAVYAXXXXXXXXXXXXXXXXAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 602
           LEPAV A                 AQCTVCL +YQ +D+LRILPYCGH FHV CIDIWLQ
Sbjct: 61  LEPAVVANFPTKKFADEFFSPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQ 120

Query: 603 QNSTCPICRISLRGSPERKRIMQPMLSSAIRSSHSMAPRYSHSYRFSYASQGYSSRSIDN 782
           Q+STCP+CRISL   PERK +MQPM SSA+RS   M  R +HSY      +G+SSRS DN
Sbjct: 121 QHSTCPVCRISLWEFPERKCLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGFSSRSHDN 180

Query: 783 RRMEPIQEDQFALDLNSAEAGGNFTSFPEVNRALKDIGCGESDNKLVDSPSN 938
            RM+PIQEDQF    + AEA  +     + N+  KD     S+NK ++SPSN
Sbjct: 181 HRMDPIQEDQFGPGGDGAEAQESTLPLTDANQPAKD-----SENKHIESPSN 227


>ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|222864493|gb|EEF01624.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  250 bits (639), Expect = 5e-64
 Identities = 134/232 (57%), Positives = 158/232 (68%)
 Frame = +3

Query: 243 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 422
           M+ +GINLVMTVIGF+VSTMFIVFVCTRLICARIQ+NASRRSF  AS S+L +LERG+HG
Sbjct: 1   MMASGINLVMTVIGFSVSTMFIVFVCTRLICARIQLNASRRSFRIASRSDLSMLERGLHG 60

Query: 423 LEPAVYAXXXXXXXXXXXXXXXXAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 602
           LEP V A                 AQCTVCLA+Y  KD+LRILPYCGHSFHV CID+WLQ
Sbjct: 61  LEPVVIASFPTKKYNDKLFSASEDAQCTVCLAEYHGKDILRILPYCGHSFHVTCIDMWLQ 120

Query: 603 QNSTCPICRISLRGSPERKRIMQPMLSSAIRSSHSMAPRYSHSYRFSYASQGYSSRSIDN 782
           Q+STCP+CRISLR  PE+K  MQP+ SSAIRS +      SHSY +     G S RS D+
Sbjct: 121 QHSTCPMCRISLREFPEKKCAMQPLFSSAIRSQYGTETFDSHSYNYLLTGHGISQRSDDS 180

Query: 783 RRMEPIQEDQFALDLNSAEAGGNFTSFPEVNRALKDIGCGESDNKLVDSPSN 938
             M+ IQ++  A D + A  G N     E N+  KD G     +K V+SPSN
Sbjct: 181 HGMDTIQDNLCASDGDEA-CGENSPPLTESNQIAKDTG-----DKHVESPSN 226


>ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|222850859|gb|EEE88406.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  249 bits (636), Expect = 1e-63
 Identities = 133/232 (57%), Positives = 154/232 (66%)
 Frame = +3

Query: 243 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 422
           MI +GINLVMTVIGF VSTMFIVFVCTRL+CARIQMNASRR+FP AS SNL LLERG  G
Sbjct: 1   MIASGINLVMTVIGFGVSTMFIVFVCTRLLCARIQMNASRRAFPIASRSNLSLLERG--G 58

Query: 423 LEPAVYAXXXXXXXXXXXXXXXXAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 602
           LE    A                 AQCT+CLA+Y   D+LRILPYCGHSFHV CIDIWLQ
Sbjct: 59  LEHVFLANFPTKKYNDKIFSASEDAQCTICLAEYHGDDILRILPYCGHSFHVTCIDIWLQ 118

Query: 603 QNSTCPICRISLRGSPERKRIMQPMLSSAIRSSHSMAPRYSHSYRFSYASQGYSSRSIDN 782
           Q+STCP+CRISLR  PE+KR+MQP+ SSAIRS +      SHSY +     G S RS +N
Sbjct: 119 QHSTCPVCRISLREFPEKKRVMQPLFSSAIRSRNGTETFDSHSYNYMLTEHGISPRSYNN 178

Query: 783 RRMEPIQEDQFALDLNSAEAGGNFTSFPEVNRALKDIGCGESDNKLVDSPSN 938
              +PIQ++  A   +  E G N     E N+  KDI      +K V+SPSN
Sbjct: 179 HGTDPIQDNHCASGGDEEEGGENSPPLTESNQIAKDIA-----DKHVESPSN 225


>ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like [Glycine max]
          Length = 229

 Score =  246 bits (628), Expect = 9e-63
 Identities = 129/232 (55%), Positives = 156/232 (67%)
 Frame = +3

Query: 243 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 422
           MI +GINLVMTVIGFAVSTMFIVFVCTRLICARI +NA+RRSFP AS SNL ++ERG HG
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHLNAARRSFPIASRSNLSMMERGCHG 60

Query: 423 LEPAVYAXXXXXXXXXXXXXXXXAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 602
           LE    A                 +QCTVCL++YQ +D+LRILPYCGHSFHV CID+WLQ
Sbjct: 61  LERVTVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVTCIDLWLQ 120

Query: 603 QNSTCPICRISLRGSPERKRIMQPMLSSAIRSSHSMAPRYSHSYRFSYASQGYSSRSIDN 782
           QNSTCP+CRISLR  P+RKR+MQP+ SSA++  + +    +  Y    A  G SSR+ DN
Sbjct: 121 QNSTCPVCRISLREFPDRKRLMQPLFSSALQPHYDIESFDNRHYHCMIADNGLSSRTPDN 180

Query: 783 RRMEPIQEDQFALDLNSAEAGGNFTSFPEVNRALKDIGCGESDNKLVDSPSN 938
             + PI+ED F  + + A A  N T   E    +KD G      K V+SPSN
Sbjct: 181 HAVNPIEEDHFPSEGDGAVAMDNITCLSE-GDFIKDEG-----KKHVESPSN 226


>emb|CBI40211.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score =  246 bits (628), Expect = 9e-63
 Identities = 125/213 (58%), Positives = 148/213 (69%)
 Frame = +3

Query: 300 MFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHGLEPAVYAXXXXXXXXXXXX 479
           MFIVFVCTRL+CARIQ+NASRRSFP AS S+L +LERG+HGLEPAV A            
Sbjct: 1   MFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGLHGLEPAVVANFPTKKFADEFF 60

Query: 480 XXXXAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQQNSTCPICRISLRGSPERK 659
                AQCTVCL +YQ +D+LRILPYCGH FHV CIDIWLQQ+STCP+CRISL   PERK
Sbjct: 61  SPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQQHSTCPVCRISLWEFPERK 120

Query: 660 RIMQPMLSSAIRSSHSMAPRYSHSYRFSYASQGYSSRSIDNRRMEPIQEDQFALDLNSAE 839
            +MQPM SSA+RS   M  R +HSY      +G+SSRS DN RM+PIQEDQF    + AE
Sbjct: 121 CLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGFSSRSHDNHRMDPIQEDQFGPGGDGAE 180

Query: 840 AGGNFTSFPEVNRALKDIGCGESDNKLVDSPSN 938
           A  +     + N+  KD     S+NK ++SPSN
Sbjct: 181 AQESTLPLTDANQPAKD-----SENKHIESPSN 208