BLASTX nr result

ID: Coptis25_contig00006304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006304
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312716.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002516851.1| protein binding protein, putative [Ricinus c...    62   6e-08
ref|XP_003546106.1| PREDICTED: uncharacterized protein LOC100527...    59   5e-07
gb|ACU16139.1| unknown [Glycine max]                                   59   5e-07
ref|XP_003541652.1| PREDICTED: uncharacterized protein LOC100777...    58   7e-07

>ref|XP_002312716.1| predicted protein [Populus trichocarpa] gi|222852536|gb|EEE90083.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = +3

Query: 213 ESPVLSSIFC--SWKRCVSLPVTPAILSPSNLCGEQKSSEQKTAPPRVSRSMSVPVRNVV 386
           +SP+++S     SW+RC SLPVTPA    SNL      S  K A   + RS+SVP RNVV
Sbjct: 94  DSPIMASFKSAFSWERCTSLPVTPA----SNLSPSPSVSMPKVAGHVIPRSLSVPGRNVV 149

Query: 387 IVRSGSSAVHKEPVQTD 437
           IV+S S A H E V TD
Sbjct: 150 IVQSASFATHDEHVATD 166


>ref|XP_002516851.1| protein binding protein, putative [Ricinus communis]
           gi|223543939|gb|EEF45465.1| protein binding protein,
           putative [Ricinus communis]
          Length = 441

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/76 (52%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
 Frame = +3

Query: 210 PESPVLSSIFC--SWKRCVSLPVTPAI-LSPS--NLCGEQKSSEQKTAPPRVSRSMSVPV 374
           P+SP+++S+    SW+RC SLPVTPA  LSPS       +   E       VSRS+SVP 
Sbjct: 92  PDSPIVASLRSAFSWQRCTSLPVTPASNLSPSVSTPVSARLPGESIKTSGAVSRSLSVPG 151

Query: 375 RNVVIVRSGSSAVHKE 422
           RNVVIVRS S A HKE
Sbjct: 152 RNVVIVRSTSFASHKE 167


>ref|XP_003546106.1| PREDICTED: uncharacterized protein LOC100527094 [Glycine max]
          Length = 422

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
 Frame = +3

Query: 213 ESPVLSSIF-CSWKRCVSLPVTPAI-LSPS-------NLCGEQKSSEQKTAPPRVSRSMS 365
           + P ++SI   +WKRC SLPVTPA  LSPS           EQ    +     +VSRS+S
Sbjct: 106 DGPNMASISEIAWKRCTSLPVTPASNLSPSVSTPISARTYNEQTKPHKDVDRSKVSRSLS 165

Query: 366 VPVRNVVIVRSGSSAVHKEPVQTDS 440
           VP RNVVIVRS S +   E  Q DS
Sbjct: 166 VPGRNVVIVRSVSFSTRSEQEQQDS 190


>gb|ACU16139.1| unknown [Glycine max]
          Length = 254

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
 Frame = +3

Query: 213 ESPVLSSIF-CSWKRCVSLPVTPAI-LSPS-------NLCGEQKSSEQKTAPPRVSRSMS 365
           + P ++SI   +WKRC SLPVTPA  LSPS           EQ    +     +VSRS+S
Sbjct: 106 DGPNMASISEIAWKRCTSLPVTPASNLSPSVSTPISARTYNEQTKPHKDVDRSKVSRSLS 165

Query: 366 VPVRNVVIVRSGSSAVHKEPVQTDS 440
           VP RNVVIVRS S +   E  Q DS
Sbjct: 166 VPGRNVVIVRSVSFSTRSEQEQQDS 190


>ref|XP_003541652.1| PREDICTED: uncharacterized protein LOC100777100 [Glycine max]
          Length = 410

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
 Frame = +3

Query: 213 ESPVLSSIF-CSWKRCVSLPVTPAI-LSPS-------NLCGEQKSSEQKTAPPRVSRSMS 365
           +SP ++SI   +WKRC SLPVTPA  LSPS           EQ    +     +VSRS+S
Sbjct: 107 DSPNMASISEIAWKRCTSLPVTPASNLSPSVSTPISARAYNEQTKPHKDVDCSKVSRSLS 166

Query: 366 VPVRNVVIVRSGSSAVHKEPVQTDS 440
           VP RNVVIVRS S +   E  Q +S
Sbjct: 167 VPGRNVVIVRSVSFSTRSEQEQQES 191


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