BLASTX nr result

ID: Coptis25_contig00006302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006302
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16028.3| unnamed protein product [Vitis vinifera]              135   5e-30
ref|XP_004145269.1| PREDICTED: mitochondrial import inner membra...   130   9e-29
ref|XP_003547167.1| PREDICTED: mitochondrial import inner membra...   130   9e-29
ref|XP_003519681.1| PREDICTED: mitochondrial import inner membra...   129   2e-28
gb|AFK43617.1| unknown [Lotus japonicus]                              128   4e-28

>emb|CBI16028.3| unnamed protein product [Vitis vinifera]
          Length = 84

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/84 (73%), Positives = 71/84 (84%)
 Frame = -2

Query: 464 MAANNVQAPSAAEKEMLLTLAEKEMEYRVELFNKLVHTCFNKCVDKRYKEPELHMGENSC 285
           MAANN   P A +KE +  +AEKEMEYRVELFNKL HTCFNKC++KRYKE EL+MGENSC
Sbjct: 1   MAANN--QPGALDKEQIFGMAEKEMEYRVELFNKLTHTCFNKCIEKRYKESELNMGENSC 58

Query: 284 IDRCVSKYWQVNSLVGQLLGMGKP 213
           IDRCVSKYWQV +L+GQLLG  +P
Sbjct: 59  IDRCVSKYWQVTNLIGQLLGSNRP 82


>ref|XP_004145269.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim10-like [Cucumis sativus]
           gi|449472902|ref|XP_004153729.1| PREDICTED:
           mitochondrial import inner membrane translocase subunit
           Tim10-like [Cucumis sativus]
           gi|449516240|ref|XP_004165155.1| PREDICTED:
           mitochondrial import inner membrane translocase subunit
           Tim10-like [Cucumis sativus]
          Length = 85

 Score =  130 bits (328), Expect = 9e-29
 Identities = 61/84 (72%), Positives = 70/84 (83%)
 Frame = -2

Query: 464 MAANNVQAPSAAEKEMLLTLAEKEMEYRVELFNKLVHTCFNKCVDKRYKEPELHMGENSC 285
           MA+ N   PSA +KE +  +AEKEMEYRVELFNKL  +CFNKCVDKRYKE EL+MGENSC
Sbjct: 1   MASPN-NMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSC 59

Query: 284 IDRCVSKYWQVNSLVGQLLGMGKP 213
           IDRCVSKYW V +L+GQLLG G+P
Sbjct: 60  IDRCVSKYWHVTNLIGQLLGSGRP 83


>ref|XP_003547167.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim10-like [Glycine max]
          Length = 84

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/82 (73%), Positives = 70/82 (85%)
 Frame = -2

Query: 458 ANNVQAPSAAEKEMLLTLAEKEMEYRVELFNKLVHTCFNKCVDKRYKEPELHMGENSCID 279
           A+N+ +PSA +KE +  +AEKEMEYRVELFNK+  TCFNKCVD RYKE EL+MGENSCID
Sbjct: 2   ASNI-SPSAFDKEQIFGMAEKEMEYRVELFNKMTQTCFNKCVDNRYKESELNMGENSCID 60

Query: 278 RCVSKYWQVNSLVGQLLGMGKP 213
           RCVSKYW V +L+GQLLG GKP
Sbjct: 61  RCVSKYWHVTNLIGQLLGSGKP 82


>ref|XP_003519681.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim10 [Glycine max] gi|255629950|gb|ACU15327.1| unknown
           [Glycine max]
          Length = 84

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/82 (71%), Positives = 70/82 (85%)
 Frame = -2

Query: 458 ANNVQAPSAAEKEMLLTLAEKEMEYRVELFNKLVHTCFNKCVDKRYKEPELHMGENSCID 279
           A+N+ +PSA +KE +  +AEKEMEYRVELFNK+  TCFNKCVD RYKE EL+MGENSCID
Sbjct: 2   ASNI-SPSAFDKEQIFGMAEKEMEYRVELFNKMTQTCFNKCVDNRYKESELNMGENSCID 60

Query: 278 RCVSKYWQVNSLVGQLLGMGKP 213
           RCVSKYW V +L+GQLLG G+P
Sbjct: 61  RCVSKYWHVTNLIGQLLGSGRP 82


>gb|AFK43617.1| unknown [Lotus japonicus]
          Length = 82

 Score =  128 bits (322), Expect = 4e-28
 Identities = 57/76 (75%), Positives = 65/76 (85%)
 Frame = -2

Query: 440 PSAAEKEMLLTLAEKEMEYRVELFNKLVHTCFNKCVDKRYKEPELHMGENSCIDRCVSKY 261
           PSA +KE +  +AEKEMEYRVELFNK+  TCFNKCV+ RYKE EL+MGENSCIDRCVSKY
Sbjct: 5   PSALDKEQIFGMAEKEMEYRVELFNKMTQTCFNKCVENRYKESELNMGENSCIDRCVSKY 64

Query: 260 WQVNSLVGQLLGMGKP 213
           W V +L+GQLLG GKP
Sbjct: 65  WHVTNLIGQLLGSGKP 80


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