BLASTX nr result

ID: Coptis25_contig00006300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006300
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]   125   5e-39
ref|XP_002267273.2| PREDICTED: BTB/POZ domain-containing protein...   125   5e-39
ref|XP_002267241.2| PREDICTED: BTB/POZ domain-containing protein...   125   5e-39
ref|XP_002320358.1| predicted protein [Populus trichocarpa] gi|2...   123   6e-39
ref|XP_004170411.1| PREDICTED: LOW QUALITY PROTEIN: BTB/POZ doma...   119   3e-38

>emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
          Length = 1388

 Score =  125 bits (313), Expect(2) = 5e-39
 Identities = 59/72 (81%), Positives = 66/72 (91%)
 Frame = -3

Query: 414 FPLVSRSGRIRKLVSETKDSKVPRINLPAVPGGPEAFELAAKFCYGINIEITLPNVAMLR 235
           FPLVSRSGRIRKL+ E KDSKV RI +P+VPGGPEAFELAAKFCYG+NIEITL NVAMLR
Sbjct: 728 FPLVSRSGRIRKLLLEAKDSKVSRIAIPSVPGGPEAFELAAKFCYGVNIEITLSNVAMLR 787

Query: 234 CAAHYLQLTEEF 199
           C AH+L++TEEF
Sbjct: 788 CVAHFLEMTEEF 799



 Score = 61.2 bits (147), Expect(2) = 5e-39
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -2

Query: 127 LQLTEEFAEKNLEIRTEIYLKEMVLQNISNSIAVLHCCKSLL 2
           L++TEEFAEKNLE RTE YLKE V  NIS+SI+VLH C++LL
Sbjct: 793 LEMTEEFAEKNLETRTEGYLKETVFPNISSSISVLHQCETLL 834


>ref|XP_002267273.2| PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform
           2 [Vitis vinifera]
          Length = 655

 Score =  125 bits (313), Expect(2) = 5e-39
 Identities = 59/72 (81%), Positives = 66/72 (91%)
 Frame = -3

Query: 414 FPLVSRSGRIRKLVSETKDSKVPRINLPAVPGGPEAFELAAKFCYGINIEITLPNVAMLR 235
           FPLVSRSGRIRKL+ E KDSKV RI +P+VPGGPEAFELAAKFCYG+NIEITL NVAMLR
Sbjct: 78  FPLVSRSGRIRKLLLEAKDSKVSRIAIPSVPGGPEAFELAAKFCYGVNIEITLSNVAMLR 137

Query: 234 CAAHYLQLTEEF 199
           C AH+L++TEEF
Sbjct: 138 CVAHFLEMTEEF 149



 Score = 61.2 bits (147), Expect(2) = 5e-39
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -2

Query: 127 LQLTEEFAEKNLEIRTEIYLKEMVLQNISNSIAVLHCCKSLL 2
           L++TEEFAEKNLE RTE YLKE V  NIS+SI+VLH C++LL
Sbjct: 143 LEMTEEFAEKNLETRTEGYLKETVFPNISSSISVLHQCETLL 184


>ref|XP_002267241.2| PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform
           1 [Vitis vinifera] gi|296086620|emb|CBI32255.3| unnamed
           protein product [Vitis vinifera]
          Length = 631

 Score =  125 bits (313), Expect(2) = 5e-39
 Identities = 59/72 (81%), Positives = 66/72 (91%)
 Frame = -3

Query: 414 FPLVSRSGRIRKLVSETKDSKVPRINLPAVPGGPEAFELAAKFCYGINIEITLPNVAMLR 235
           FPLVSRSGRIRKL+ E KDSKV RI +P+VPGGPEAFELAAKFCYG+NIEITL NVAMLR
Sbjct: 54  FPLVSRSGRIRKLLLEAKDSKVSRIAIPSVPGGPEAFELAAKFCYGVNIEITLSNVAMLR 113

Query: 234 CAAHYLQLTEEF 199
           C AH+L++TEEF
Sbjct: 114 CVAHFLEMTEEF 125



 Score = 61.2 bits (147), Expect(2) = 5e-39
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -2

Query: 127 LQLTEEFAEKNLEIRTEIYLKEMVLQNISNSIAVLHCCKSLL 2
           L++TEEFAEKNLE RTE YLKE V  NIS+SI+VLH C++LL
Sbjct: 119 LEMTEEFAEKNLETRTEGYLKETVFPNISSSISVLHQCETLL 160


>ref|XP_002320358.1| predicted protein [Populus trichocarpa] gi|222861131|gb|EEE98673.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  123 bits (309), Expect(2) = 6e-39
 Identities = 57/72 (79%), Positives = 66/72 (91%)
 Frame = -3

Query: 414 FPLVSRSGRIRKLVSETKDSKVPRINLPAVPGGPEAFELAAKFCYGINIEITLPNVAMLR 235
           FPLVSRSGRIRKL+ E KDSK+ RIN+PAVPGGPEAFELAAKFCYG+N+EIT  NVAML 
Sbjct: 54  FPLVSRSGRIRKLLLEAKDSKISRINIPAVPGGPEAFELAAKFCYGVNVEITQSNVAMLC 113

Query: 234 CAAHYLQLTEEF 199
           CAAH+L++TE+F
Sbjct: 114 CAAHFLEMTEDF 125



 Score = 62.4 bits (150), Expect(2) = 6e-39
 Identities = 29/42 (69%), Positives = 37/42 (88%)
 Frame = -2

Query: 127 LQLTEEFAEKNLEIRTEIYLKEMVLQNISNSIAVLHCCKSLL 2
           L++TE+FAEKNLE R E YLKEMVL NIS+SI+V+H C++LL
Sbjct: 119 LEMTEDFAEKNLEARAEAYLKEMVLPNISSSISVIHRCETLL 160


>ref|XP_004170411.1| PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein
           At1g03010-like [Cucumis sativus]
          Length = 675

 Score =  119 bits (298), Expect(2) = 3e-38
 Identities = 55/72 (76%), Positives = 63/72 (87%)
 Frame = -3

Query: 414 FPLVSRSGRIRKLVSETKDSKVPRINLPAVPGGPEAFELAAKFCYGINIEITLPNVAMLR 235
           FPLVSRSG+IRKL+ E KDSK  R+NL  +PGG EAFEL AKFCYGIN+EITL NVAMLR
Sbjct: 97  FPLVSRSGKIRKLLLEAKDSKTSRVNLSTIPGGSEAFELTAKFCYGINVEITLSNVAMLR 156

Query: 234 CAAHYLQLTEEF 199
           CA+HYL++TEEF
Sbjct: 157 CASHYLEMTEEF 168



 Score = 64.3 bits (155), Expect(2) = 3e-38
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = -2

Query: 127 LQLTEEFAEKNLEIRTEIYLKEMVLQNISNSIAVLHCCKSLL 2
           L++TEEFA++NLE RTE YLKE+V  NISNSI+VLH C+SLL
Sbjct: 162 LEMTEEFADRNLETRTEAYLKELVFPNISNSISVLHRCESLL 203


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