BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006290
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA57305.1| TPA: hypothetical protein ZEAMMB73_061992 [Zea m...   122   2e-26
gb|EEC71618.1| hypothetical protein OsI_04035 [Oryza sativa Indi...   122   4e-26
gb|EAZ13801.1| hypothetical protein OsJ_03724 [Oryza sativa Japo...   122   4e-26
ref|NP_001044484.1| Os01g0788900 [Oryza sativa Japonica Group] g...   122   4e-26
ref|XP_002512079.1| pentatricopeptide repeat-containing protein,...   120   1e-25

>tpg|DAA57305.1| TPA: hypothetical protein ZEAMMB73_061992 [Zea mays]
          Length = 680

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/79 (75%), Positives = 71/79 (89%)
 Frame = -2

Query: 239 ACVNLGLLDKAHSILDQMTAEGGFVGLGVYTSIVKAYCKEQRTSEAAQLVMDISASGLQL 60
           ACV LGLL+KAHSILD+MTA+G  VGLGVY+SI+KAYCKEQ+T+EAAQLV +ISA+GLQL
Sbjct: 402 ACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQKTAEAAQLVAEISAAGLQL 461

Query: 59  DAASYDTLIEASMSNQDFQ 3
           DA SYD LI+ASM+  DFQ
Sbjct: 462 DAGSYDALIDASMTAHDFQ 480


>gb|EEC71618.1| hypothetical protein OsI_04035 [Oryza sativa Indica Group]
          Length = 670

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/78 (76%), Positives = 70/78 (89%)
 Frame = -2

Query: 239 ACVNLGLLDKAHSILDQMTAEGGFVGLGVYTSIVKAYCKEQRTSEAAQLVMDISASGLQL 60
           ACV LGLL+KAHSILD+MTA+G  VGLGVY+SI+KAYCKEQRT+EAAQLV +ISA+GLQL
Sbjct: 392 ACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLVSEISAAGLQL 451

Query: 59  DAASYDTLIEASMSNQDF 6
           DA SYD LI+ASM+  DF
Sbjct: 452 DAGSYDALIDASMTAHDF 469


>gb|EAZ13801.1| hypothetical protein OsJ_03724 [Oryza sativa Japonica Group]
          Length = 670

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/78 (76%), Positives = 70/78 (89%)
 Frame = -2

Query: 239 ACVNLGLLDKAHSILDQMTAEGGFVGLGVYTSIVKAYCKEQRTSEAAQLVMDISASGLQL 60
           ACV LGLL+KAHSILD+MTA+G  VGLGVY+SI+KAYCKEQRT+EAAQLV +ISA+GLQL
Sbjct: 392 ACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLVSEISAAGLQL 451

Query: 59  DAASYDTLIEASMSNQDF 6
           DA SYD LI+ASM+  DF
Sbjct: 452 DAGSYDALIDASMTAHDF 469


>ref|NP_001044484.1| Os01g0788900 [Oryza sativa Japonica Group]
           gi|20160827|dbj|BAB89767.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|20161191|dbj|BAB90118.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113534015|dbj|BAF06398.1|
           Os01g0788900 [Oryza sativa Japonica Group]
           gi|215740585|dbj|BAG97241.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 670

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/78 (76%), Positives = 70/78 (89%)
 Frame = -2

Query: 239 ACVNLGLLDKAHSILDQMTAEGGFVGLGVYTSIVKAYCKEQRTSEAAQLVMDISASGLQL 60
           ACV LGLL+KAHSILD+MTA+G  VGLGVY+SI+KAYCKEQRT+EAAQLV +ISA+GLQL
Sbjct: 392 ACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLVSEISAAGLQL 451

Query: 59  DAASYDTLIEASMSNQDF 6
           DA SYD LI+ASM+  DF
Sbjct: 452 DAGSYDALIDASMTAHDF 469


>ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549259|gb|EEF50748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 650

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/79 (75%), Positives = 67/79 (84%)
 Frame = -2

Query: 239 ACVNLGLLDKAHSILDQMTAEGGFVGLGVYTSIVKAYCKEQRTSEAAQLVMDISASGLQL 60
           ACVNLGL DKAHSILD+M A+GG VG GVY  I+KAYCKE RT+EA QLVM+IS  GLQL
Sbjct: 365 ACVNLGLSDKAHSILDEMDAKGGSVGFGVYVPILKAYCKEGRTAEATQLVMEISNLGLQL 424

Query: 59  DAASYDTLIEASMSNQDFQ 3
           DA SYD LIEASM++QDFQ
Sbjct: 425 DAGSYDALIEASMTSQDFQ 443