BLASTX nr result

ID: Coptis25_contig00006275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006275
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247...   155   9e-36
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258...   149   5e-34
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]   149   5e-34
emb|CBI40561.3| unnamed protein product [Vitis vinifera]              145   7e-33
ref|XP_002321404.1| predicted protein [Populus trichocarpa] gi|2...   118   2e-24

>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
          Length = 1876

 Score =  155 bits (392), Expect = 9e-36
 Identities = 86/179 (48%), Positives = 106/179 (59%), Gaps = 13/179 (7%)
 Frame = +3

Query: 261  DNCNTSILKFQRSCPNPDCSYDLCLTCCLELREGRQPG----------VMKRILLRGSML 410
            DNCNTSI+   RSCPNPDCSYDLCLTCC ELR+G QPG           ++R+  +G+ +
Sbjct: 1205 DNCNTSIVNLHRSCPNPDCSYDLCLTCCRELRKGLQPGGNEAESSHQQFVERVNGQGTEV 1264

Query: 411  NMHIVS*S-RYGWASRKRSGGEGAQSTEGSLTDVVGQFPYWRTNIDCSLPCPPIECGGCG 587
               I +   RYGW S      +GA  T     D    FP WR N+D S+PCPP   GGCG
Sbjct: 1265 KGRIPAHDERYGWES------DGAHPTNNYAADTC-DFPDWRVNMDGSIPCPPKARGGCG 1317

Query: 588  SKILELRRSLKANWTSNLLKSAEKLTSNSPFPNVDSPIGCSSCLP--FVGKVFKNPEVR 758
            ++ LELRR  + NW  +L+KSAE LT N   P++D   GCS CLP    G   K+ EVR
Sbjct: 1318 TETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTASTGSGEKHCEVR 1376


>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
          Length = 1035

 Score =  149 bits (377), Expect = 5e-34
 Identities = 78/161 (48%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
 Frame = +3

Query: 261 DNCNTSILKFQRSCPNPDCSYDLCLTCCLELREGRQPGVMKRILLRGSMLNM---HIVS* 431
           DNCNTSI+ F RSCPNPDCSYDLCL CC ELREGRQPG  +        +      +   
Sbjct: 313 DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQVADG 372

Query: 432 SRYGWASRKRSG--GEGAQSTEGSLTDVVGQFPYWRTNIDCSLPCPPIECGGCGSKILEL 605
                  RKR+G   E   + + S  DV  QFP WR   D S+PCPP E GGCG+ ILEL
Sbjct: 373 KSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILEL 432

Query: 606 RRSLKANWTSNLLKSAEKLTSNSPFPNVDSPIGCSSCLPFV 728
           RR+ KANW   L++S+E L  +   P+ +   GCS C P V
Sbjct: 433 RRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNV 473


>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
          Length = 1160

 Score =  149 bits (377), Expect = 5e-34
 Identities = 78/161 (48%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
 Frame = +3

Query: 261 DNCNTSILKFQRSCPNPDCSYDLCLTCCLELREGRQPGVMKRILLRGSMLNM---HIVS* 431
           DNCNTSI+ F RSCPNPDCSYDLCL CC ELREGRQPG  +        +      +   
Sbjct: 313 DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQVADG 372

Query: 432 SRYGWASRKRSG--GEGAQSTEGSLTDVVGQFPYWRTNIDCSLPCPPIECGGCGSKILEL 605
                  RKR+G   E   + + S  DV  QFP WR   D S+PCPP E GGCG+ ILEL
Sbjct: 373 KSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILEL 432

Query: 606 RRSLKANWTSNLLKSAEKLTSNSPFPNVDSPIGCSSCLPFV 728
           RR+ KANW   L++S+E L  +   P+ +   GCS C P V
Sbjct: 433 RRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNV 473


>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score =  145 bits (367), Expect = 7e-33
 Identities = 78/156 (50%), Positives = 91/156 (58%)
 Frame = +3

Query: 261 DNCNTSILKFQRSCPNPDCSYDLCLTCCLELREGRQPGVMKRILLRGSMLNMHIVS*SRY 440
           DNCNTSI+ F RSCPNPDCSYDLCL CC ELREGRQPG        GS         S  
Sbjct: 289 DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPG--------GSEAET-----SHQ 335

Query: 441 GWASRKRSGGEGAQSTEGSLTDVVGQFPYWRTNIDCSLPCPPIECGGCGSKILELRRSLK 620
            +  R      G  + + S  DV  QFP WR   D S+PCPP E GGCG+ ILELRR+ K
Sbjct: 336 QFVER----AHGQLAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILELRRNFK 391

Query: 621 ANWTSNLLKSAEKLTSNSPFPNVDSPIGCSSCLPFV 728
           ANW   L++S+E L  +   P+ +   GCS C P V
Sbjct: 392 ANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNV 427


>ref|XP_002321404.1| predicted protein [Populus trichocarpa] gi|222868400|gb|EEF05531.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score =  118 bits (295), Expect = 2e-24
 Identities = 64/154 (41%), Positives = 82/154 (53%)
 Frame = +3

Query: 261 DNCNTSILKFQRSCPNPDCSYDLCLTCCLELREGRQPGVMKRILLRGSMLNMHIVS*SRY 440
           DNC+TSI+ F RSCPNPDCSYDLCLTCC ELR G +PG                      
Sbjct: 103 DNCSTSIVNFHRSCPNPDCSYDLCLTCCSELRIGFKPG---------------------- 140

Query: 441 GWASRKRSGGEGAQSTEGSLTDVVGQFPYWRTNIDCSLPCPPIECGGCGSKILELRRSLK 620
           G   + +     ++ T     D+  +FP WR   D  +PCPP E GGCG++IL LRR   
Sbjct: 141 GLGCKTQVSDLESKCT----ADMSCKFPDWRAESDGRIPCPPKELGGCGNEILTLRRIFD 196

Query: 621 ANWTSNLLKSAEKLTSNSPFPNVDSPIGCSSCLP 722
           A +   ++KSAE+LT N   P++     C  C P
Sbjct: 197 AKFVEEMIKSAEELTLNYQSPDIRLCEECYLCHP 230


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