BLASTX nr result
ID: Coptis25_contig00006274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006274
(823 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23011.3| unnamed protein product [Vitis vinifera] 78 4e-24
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247... 77 7e-24
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera] 73 3e-23
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258... 73 8e-23
emb|CBI40561.3| unnamed protein product [Vitis vinifera] 72 2e-22
>emb|CBI23011.3| unnamed protein product [Vitis vinifera]
Length = 1904
Score = 78.2 bits (191), Expect(2) = 4e-24
Identities = 59/160 (36%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Frame = +2
Query: 176 LWSDNCNTSIFNFHRSFPIWN*GKAASLGVMKCILLRDGMLNELMVKTQDTDDKGATRAS 355
++ DNCNTSI N HRS P N + L + C LR G+ E+ KG A
Sbjct: 1202 VYCDNCNTSIVNLHRSCP--NPDCSYDLCLTCCRELRKGLQPEV---------KGRIPAH 1250
Query: 356 RKRSDWEGAQSAEGSLTDVVF*EQLLAVPFPVLQKSGGCGSKILELRRSLKANWACNLLK 535
+R WE + +GS +P P + GGCG++ LELRR + NW +L+K
Sbjct: 1251 DERYGWE--MNMDGS------------IPCPPKAR-GGCGTETLELRRIFEPNWVDHLIK 1295
Query: 536 SADKLTSNSHFPNFDSPIGCSSCHP--YVGKVFKNLEMRR 649
SA+ LT N P+ D GCS C P G K+ E+RR
Sbjct: 1296 SAEDLTMNFGSPDIDFSQGCSLCLPTASTGSGEKHCEVRR 1335
Score = 59.7 bits (143), Expect(2) = 4e-24
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +1
Query: 673 RFVFRSDSKDNYLYCPNVVDLRNDEIEQFQIHWMRGELIIVRHI 804
R FR +S D++LYCPN L ++EIE FQ+HWMRGE +IVR++
Sbjct: 1335 RAAFRENSHDDFLYCPNSACLGDNEIEHFQMHWMRGEPVIVRNV 1378
>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
Length = 1876
Score = 77.4 bits (189), Expect(2) = 7e-24
Identities = 65/179 (36%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Frame = +2
Query: 176 LWSDNCNTSIFNFHRSFPIWN*GKAASLGVMKCILLRDGML---NEL---------MVKT 319
++ DNCNTSI N HRS P N + L + C LR G+ NE V
Sbjct: 1202 VYCDNCNTSIVNLHRSCP--NPDCSYDLCLTCCRELRKGLQPGGNEAESSHQQFVERVNG 1259
Query: 320 QDTDDKGATRASRKRSDWE--GAQSAEGSLTDVV-F*EQLL----AVPFPVLQKSGGCGS 478
Q T+ KG A +R WE GA D F + + ++P P + GGCG+
Sbjct: 1260 QGTEVKGRIPAHDERYGWESDGAHPTNNYAADTCDFPDWRVNMDGSIPCPPKAR-GGCGT 1318
Query: 479 KILELRRSLKANWACNLLKSADKLTSNSHFPNFDSPIGCSSCHP--YVGKVFKNLEMRR 649
+ LELRR + NW +L+KSA+ LT N P+ D GCS C P G K+ E+RR
Sbjct: 1319 ETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTASTGSGEKHCEVRR 1377
Score = 59.7 bits (143), Expect(2) = 7e-24
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +1
Query: 673 RFVFRSDSKDNYLYCPNVVDLRNDEIEQFQIHWMRGELIIVRHI 804
R FR +S D++LYCPN L ++EIE FQ+HWMRGE +IVR++
Sbjct: 1377 RAAFRENSHDDFLYCPNSACLGDNEIEHFQMHWMRGEPVIVRNV 1420
>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
Length = 1160
Score = 73.2 bits (178), Expect(2) = 3e-23
Identities = 59/180 (32%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Frame = +2
Query: 176 LWSDNCNTSIFNFHRSFPIWN*GKAASLGVMKCILLRDG--------------MLNELMV 313
L+ DNCNTSI +FHRS P N + L ++ C LR+G +
Sbjct: 310 LYCDNCNTSIVDFHRSCP--NPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHG 367
Query: 314 KTQDTDDKGATRASRKRSDWEGAQSAEGSLTDVV--F*EQLL----AVPFPVLQKSGGCG 475
+ D K T+ R E +A+ S DV F + ++P P ++ GGCG
Sbjct: 368 QVADGKSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKER-GGCG 426
Query: 476 SKILELRRSLKANWACNLLKSADKLTSNSHFPNFDSPIGCSSCHPYV--GKVFKNLEMRR 649
+ ILELRR+ KANW L++S++ L + P+ + GCS C P V +N EMR+
Sbjct: 427 TAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSEQNSEMRK 486
Score = 62.0 bits (149), Expect(2) = 3e-23
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +1
Query: 682 FRSDSKDNYLYCPNVVDLRNDEIEQFQIHWMRGELIIVRHI 804
FR DN+LYCPN V++ +DEIE FQ HWMRGE +IVR++
Sbjct: 489 FRKHGHDNFLYCPNAVNITDDEIEHFQRHWMRGEPVIVRNV 529
>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
Length = 1035
Score = 73.2 bits (178), Expect(2) = 8e-23
Identities = 59/180 (32%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Frame = +2
Query: 176 LWSDNCNTSIFNFHRSFPIWN*GKAASLGVMKCILLRDG--------------MLNELMV 313
L+ DNCNTSI +FHRS P N + L ++ C LR+G +
Sbjct: 310 LYCDNCNTSIVDFHRSCP--NPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHG 367
Query: 314 KTQDTDDKGATRASRKRSDWEGAQSAEGSLTDVV--F*EQLL----AVPFPVLQKSGGCG 475
+ D K T+ R E +A+ S DV F + ++P P ++ GGCG
Sbjct: 368 QVADGKSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKER-GGCG 426
Query: 476 SKILELRRSLKANWACNLLKSADKLTSNSHFPNFDSPIGCSSCHPYV--GKVFKNLEMRR 649
+ ILELRR+ KANW L++S++ L + P+ + GCS C P V +N EMR+
Sbjct: 427 TAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSEQNSEMRK 486
Score = 60.5 bits (145), Expect(2) = 8e-23
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +1
Query: 682 FRSDSKDNYLYCPNVVDLRNDEIEQFQIHWMRGELIIVRHI 804
FR DN+L+CPN V++ +DEIE FQ HWMRGE +IVR++
Sbjct: 489 FRKHGHDNFLFCPNAVNITDDEIEHFQRHWMRGEPVIVRNV 529
>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
Length = 897
Score = 72.0 bits (175), Expect(2) = 2e-22
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Frame = +2
Query: 176 LWSDNCNTSIFNFHRSFPIWN*GKAASLGVMKCILLRDGML---------NELMVKT--- 319
L+ DNCNTSI +FHRS P N + L ++ C LR+G ++ V+
Sbjct: 286 LYCDNCNTSIVDFHRSCP--NPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHG 343
Query: 320 QDTDDKGATRASRKRSDWEGAQSAEGSLTDVVF*EQLLAVPFPVLQKSGGCGSKILELRR 499
Q D S + DW + +GS +P P ++ GGCG+ ILELRR
Sbjct: 344 QLAADDSKADVSNQFPDWRA--TGDGS------------IPCPPKER-GGCGTAILELRR 388
Query: 500 SLKANWACNLLKSADKLTSNSHFPNFDSPIGCSSCHPYV--GKVFKNLEMRR 649
+ KANW L++S++ L + P+ + GCS C P V +N EMR+
Sbjct: 389 NFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSEQNSEMRK 440
Score = 60.5 bits (145), Expect(2) = 2e-22
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +1
Query: 682 FRSDSKDNYLYCPNVVDLRNDEIEQFQIHWMRGELIIVRHI 804
FR DN+L+CPN V++ +DEIE FQ HWMRGE +IVR++
Sbjct: 443 FRKHGHDNFLFCPNAVNITDDEIEHFQRHWMRGEPVIVRNV 483